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Heatmap: Cluster_73 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.06 0.0 0.27 0.23 0.04 0.08 0.02 0.06 0.05 0.05 0.05 0.04 0.36 0.0 0.31 0.22 0.28 0.52 1.32 2.72 0.1 5.14 0.25 0.24 0.83 0.0 0.09 0.47 0.28 0.43 0.56 0.45
5.61 4.84 4.96 6.3 7.82 12.52 10.7 10.7 9.13 15.3 8.21 10.34 6.3 4.12 6.32 6.17 6.9 7.92 8.74 20.01 10.63 42.95 6.95 6.08 5.9 11.89 18.35 18.05 7.91 7.51 8.64 8.61
131.58 124.09 108.16 139.7 92.46 122.96 74.42 109.51 93.28 138.31 97.9 201.67 229.53 74.13 22.18 164.48 165.0 267.5 141.63 1529.38 868.74 979.08 159.18 190.21 467.39 227.34 106.18 158.58 202.35 194.19 184.84 235.02
5.44 5.08 3.7 7.3 11.84 12.73 12.81 13.21 12.34 10.03 9.82 7.38 4.31 4.7 12.08 7.81 8.3 7.67 6.89 32.07 20.8 47.19 6.73 5.99 3.89 4.83 11.87 14.76 8.33 8.61 10.48 9.58
Smo117027 (CEL2)
 1.74 1.96 2.16 1.93 2.22 1.77 1.78 0.89 2.47 1.24 1.92 1.61 0.26 0.04 0.47 0.45 1.56 0.63 0.41 10.31 0.18 5.44 0.1 0.03 1.72 0.15 0.35 0.13 0.55 0.83 0.69 0.48
3.66 4.73 3.17 4.97 8.77 9.49 7.85 9.88 6.36 4.81 5.95 4.19 2.11 2.88 10.09 2.94 2.54 1.61 2.98 14.63 7.41 28.6 3.88 3.78 5.31 9.43 10.7 15.55 4.63 4.33 2.71 2.13
1.7 1.62 1.22 1.65 3.65 4.53 6.27 5.65 5.73 4.95 2.81 2.39 0.47 0.4 1.36 0.62 1.64 2.28 1.37 10.82 6.19 18.76 1.28 0.84 2.25 2.76 5.27 4.85 2.19 1.91 2.28 1.72
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 844.83 0.0 0.0 914.32 715.18 1048.59 745.69 5232.4 760.43 3687.95 589.03 667.09 171.82 0.0 0.0 0.0 661.18 688.2 887.03 973.17
21.62 27.04 22.15 22.72 23.07 28.78 26.22 25.84 27.18 27.48 25.68 24.72 46.25 34.25 63.43 51.26 19.59 15.26 27.76 214.62 38.29 136.66 21.7 23.92 54.85 106.09 69.08 72.05 17.07 17.48 16.1 17.74
Smo403901 (VPS25)
 28.18 33.61 28.99 37.22 36.03 40.65 38.46 40.77 40.01 31.97 37.23 31.53 39.78 63.71 74.76 43.65 27.6 25.2 34.64 221.17 67.43 155.94 35.95 39.84 68.04 23.05 34.52 36.47 30.19 32.18 22.12 21.96
20.94 24.02 24.92 26.12 24.91 24.16 29.06 28.15 25.43 24.23 24.0 22.14 4.46 7.94 20.29 10.06 28.95 32.46 24.54 79.62 17.89 50.87 17.77 15.49 52.68 27.21 37.02 32.04 25.11 24.32 20.45 20.93
0.63 1.02 1.19 1.09 1.15 1.61 1.22 1.16 1.11 1.64 1.06 1.02 1.07 0.47 0.94 0.45 0.31 0.33 2.19 5.03 0.58 8.11 0.57 0.75 0.66 1.59 2.64 1.94 0.27 0.23 0.27 0.33
0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.61 0.0 0.19 0.0 0.1 1.04 0.5 1.51 2.4 0.79 0.67 1.44 5.82 4.52 4.36 0.73 1.06 3.97 0.39 0.47 0.84 0.65 1.1 0.0 0.09
0.9 1.17 0.97 2.49 0.86 1.87 0.64 1.35 0.69 1.89 1.41 1.39 2.99 1.08 0.97 2.62 1.0 0.23 1.89 6.18 1.39 5.21 1.87 2.0 4.15 2.06 2.21 1.1 1.12 1.09 1.36 1.41
0.09 0.05 0.0 0.06 0.0 0.15 0.18 0.22 0.28 0.14 0.09 0.14 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.62 0.0 0.62 0.0 0.05 0.14 0.06 0.0 0.21 0.03 0.03 0.0 0.0
1.14 1.25 2.14 1.06 1.99 3.34 2.28 2.27 3.19 1.37 3.1 1.29 10.65 3.74 4.49 8.93 3.99 2.21 9.08 19.61 11.23 12.62 5.5 6.27 6.91 2.05 5.89 3.49 5.67 5.18 3.97 4.25
0.03 0.02 0.02 0.02 0.0 0.03 0.0 0.18 0.03 0.04 0.0 0.19 0.0 0.0 0.0 0.0 0.03 0.0 0.1 5.29 0.0 6.54 0.03 0.0 0.12 0.06 0.0 0.0 0.06 0.06 0.06 0.03
Smo412486 (EDA9)
 0.32 0.25 0.33 0.35 0.3 0.29 0.47 0.4 0.58 0.17 0.39 0.41 2.04 0.94 2.6 1.13 0.29 0.08 0.79 8.04 1.31 2.66 0.08 0.17 2.01 0.1 0.28 0.45 0.28 0.31 0.26 0.28
3.17 1.78 1.08 2.56 2.08 0.91 2.04 3.12 1.78 1.79 2.21 2.77 2.26 1.18 0.74 2.78 5.27 5.63 6.12 60.88 1.78 29.49 8.12 5.87 4.03 3.79 6.97 6.64 6.43 5.26 2.99 2.39
0.37 0.27 0.5 0.43 0.23 0.63 0.47 0.69 0.94 0.35 0.46 0.33 0.68 0.45 0.21 1.21 0.72 1.26 1.11 5.14 1.47 4.74 1.24 0.96 1.98 0.46 2.21 1.75 1.31 1.06 1.05 0.67
Smo414116 (FAB1A)
 1.63 1.68 2.12 2.88 0.96 3.22 2.69 2.63 2.53 1.85 3.08 2.18 2.69 2.21 2.25 4.69 3.57 2.21 3.88 11.46 6.85 16.65 4.5 3.62 9.11 5.36 5.51 5.22 2.84 3.63 2.36 2.26
0.12 0.39 0.13 0.05 0.71 0.0 0.0 0.0 0.2 0.76 0.07 0.47 0.0 0.0 0.19 0.0 0.0 0.02 0.0 2.06 0.8 1.82 0.0 0.0 0.64 0.0 0.18 0.0 0.0 0.0 0.0 0.0
0.1 0.19 0.06 0.22 0.71 1.02 0.86 1.05 0.99 0.36 0.27 0.19 1.25 0.05 0.62 0.31 0.42 0.19 0.12 4.82 1.42 8.87 0.37 0.05 1.11 1.08 4.2 3.41 0.4 0.32 0.38 0.41
17.79 19.68 18.61 18.44 18.96 17.22 16.57 17.18 14.66 13.22 13.1 14.41 30.21 24.94 47.77 25.61 22.18 23.61 24.26 166.5 73.93 51.64 23.28 23.8 89.91 11.95 21.62 21.63 22.22 23.61 21.12 19.28
38.98 42.38 35.66 40.28 46.2 49.9 47.18 35.42 32.51 23.37 26.39 26.3 65.73 47.66 132.61 80.83 57.53 54.42 73.68 296.13 77.05 332.63 57.35 60.12 32.49 118.8 185.69 190.76 40.59 40.95 24.03 22.92
5.26 4.58 6.08 3.84 6.14 5.67 5.37 4.88 3.59 3.45 2.76 2.91 2.16 2.29 7.3 2.11 3.02 0.28 3.67 45.79 12.49 12.36 3.61 3.51 28.65 3.02 4.92 2.06 2.13 2.04 4.28 5.0
10.64 8.71 8.63 11.17 13.78 16.57 12.29 12.16 9.56 11.98 10.27 9.46 21.77 18.41 34.42 20.18 15.23 16.86 29.7 171.93 76.22 147.49 19.23 20.5 70.42 23.03 32.73 34.96 15.22 14.97 20.36 20.18
0.22 0.04 0.02 0.01 0.42 0.49 0.34 0.3 0.34 0.33 0.23 0.39 0.0 0.05 0.11 0.09 0.21 0.35 0.12 2.47 0.56 3.12 0.08 0.06 0.65 0.62 0.56 0.73 0.28 0.34 0.31 0.18
5.27 4.29 4.53 4.36 5.47 5.85 6.93 5.63 5.22 4.73 4.53 3.82 4.17 6.09 15.36 4.05 4.78 0.46 6.48 23.84 11.25 14.47 4.87 5.05 7.13 6.39 8.1 7.04 4.72 4.96 4.85 5.54
0.62 0.88 0.73 0.64 1.01 0.56 0.83 0.59 0.25 0.25 0.76 0.6 1.09 0.5 1.6 0.65 0.52 0.93 1.5 18.21 4.5 13.53 0.8 0.78 11.15 1.54 1.3 0.93 0.3 0.87 0.14 0.37
Smo424000 (AGD2)
 4.77 3.78 5.02 6.45 6.8 5.0 5.65 4.87 5.32 5.28 4.41 5.8 1.99 2.81 9.67 1.71 2.67 0.0 2.1 20.04 14.48 24.69 3.03 3.17 11.72 5.51 5.78 7.07 1.84 2.42 1.89 1.35
1.04 0.87 0.55 0.85 0.33 1.32 0.86 0.84 0.73 1.07 0.8 0.97 1.56 1.42 2.36 1.92 0.97 0.41 1.03 11.38 8.02 5.42 1.39 1.24 3.14 1.69 1.75 1.2 0.66 0.89 0.86 0.62
2.61 2.5 2.69 2.6 3.43 3.38 2.04 2.47 2.58 2.46 2.08 1.95 1.75 2.26 7.11 2.34 2.43 1.57 4.9 12.66 4.02 10.05 2.56 1.73 4.23 6.23 3.68 3.5 2.1 2.42 2.06 2.29
19.83 16.45 15.0 16.56 16.96 15.88 18.71 16.7 18.93 20.48 18.34 19.21 16.23 14.0 18.82 18.14 12.79 5.2 17.9 41.81 32.11 48.38 13.96 14.77 20.36 28.34 22.49 19.54 12.74 14.08 17.05 21.32
0.08 0.08 0.27 0.02 0.41 0.17 0.41 0.41 0.21 0.15 0.05 0.13 0.08 0.09 0.02 0.17 0.35 0.67 0.36 2.25 0.12 2.03 0.33 0.33 1.17 0.46 0.74 0.48 0.5 0.67 0.15 0.22
18.99 21.74 22.63 23.13 24.74 32.98 31.05 19.6 22.92 16.48 19.94 16.89 19.35 9.7 69.18 22.76 21.74 24.1 21.04 113.4 9.4 104.58 10.5 10.9 27.25 21.21 37.25 35.4 17.59 20.42 10.92 13.38
Smo59259 (emb2735)
 3.09 6.47 3.13 5.53 6.42 8.95 8.43 9.92 7.05 11.91 7.67 4.11 16.55 5.12 11.57 15.66 6.44 8.76 9.38 38.22 31.05 46.46 11.87 13.24 19.01 12.48 10.44 12.58 8.27 9.41 3.73 5.48
176.35 183.56 242.89 177.76 96.28 187.18 204.93 210.98 159.93 158.74 180.32 159.88 283.24 347.88 354.26 312.81 195.48 390.8 196.63 1309.97 323.44 762.34 217.99 219.6 247.72 417.66 480.28 393.64 184.21 223.51 252.37 283.9
7.54 6.85 9.78 9.59 12.07 13.65 14.31 13.2 12.82 11.16 9.73 7.33 22.66 8.81 26.28 24.65 15.95 12.41 22.47 63.6 23.6 58.46 17.24 19.12 51.11 22.15 25.09 27.04 18.77 18.8 12.39 14.05
1.48 1.49 2.54 1.86 1.38 3.12 2.3 2.05 2.31 1.82 2.85 2.01 1.35 0.54 12.86 1.7 4.24 4.85 4.25 24.37 12.42 35.46 0.73 0.43 1.09 0.28 0.17 0.93 1.61 1.64 2.11 1.25
14.22 16.97 23.32 18.96 21.94 19.72 20.07 22.28 24.24 22.28 21.0 19.4 12.3 13.75 22.27 14.43 13.92 8.0 14.18 51.11 40.17 91.61 11.18 12.44 33.03 19.53 16.22 16.77 13.27 14.35 11.52 12.05
13.13 12.36 13.51 10.84 15.35 16.53 13.41 13.16 11.7 10.96 12.34 9.09 10.94 11.21 21.15 15.02 9.69 11.22 14.81 34.11 15.27 48.89 8.75 10.91 20.58 13.44 14.9 16.02 9.95 11.84 9.58 12.09
56.25 35.22 36.33 47.39 43.26 54.8 46.51 50.45 52.19 57.76 48.97 57.12 102.77 57.54 88.42 105.77 58.72 86.07 102.06 494.13 171.99 418.4 61.93 73.86 79.3 64.96 47.82 41.86 82.58 78.85 66.38 82.69
1.83 2.51 2.06 1.99 3.93 4.88 6.05 3.98 4.22 3.71 3.3 2.68 2.46 1.98 2.75 3.35 4.34 4.34 4.86 15.01 8.21 24.06 2.42 2.94 6.21 3.16 5.69 7.11 4.72 4.83 4.45 3.46
6.32 5.85 17.3 5.72 18.1 6.92 7.34 2.3 4.97 1.7 4.37 4.03 71.2 27.5 117.9 92.02 68.68 102.17 60.65 611.75 237.6 347.01 57.54 54.29 181.13 10.98 17.18 42.18 63.33 68.22 41.98 45.7
1.07 0.56 0.73 1.06 2.3 3.76 3.98 3.84 2.9 2.98 1.89 1.6 0.46 0.73 1.97 1.06 0.88 1.16 0.56 5.54 2.87 9.23 0.87 0.79 0.65 0.72 2.27 2.78 1.49 1.67 1.51 0.97

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)