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Heatmap: Cluster_90 (HCCA)

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(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
31.81 36.04 39.54 49.19 56.37 60.65 57.14 53.26 43.16 38.63 37.7 31.52 18.52 27.98 43.04 24.79 31.35 20.19 30.2 2.77 4.93 2.18 30.16 27.87 11.1 39.4 75.58 83.06 28.13 29.92 24.34 21.53
48.82 42.62 42.59 45.65 55.76 64.82 69.76 81.74 59.64 55.63 50.72 46.13 16.29 12.87 32.77 19.74 32.33 21.71 43.73 5.85 5.52 4.59 33.11 31.12 40.19 64.62 106.93 109.21 42.54 42.9 27.6 25.39
Smo117257 (SPPL1)
 37.65 31.29 39.3 37.39 39.57 39.11 44.76 41.05 37.69 35.42 38.18 31.39 18.28 14.67 17.2 23.04 44.67 38.5 37.6 6.35 21.86 0.0 34.38 25.83 28.38 32.63 55.7 75.75 48.15 49.4 32.85 25.53
14.0 12.22 14.15 16.05 18.87 24.06 36.81 40.38 38.07 40.98 34.43 28.01 2.95 5.03 11.09 4.43 12.02 9.6 9.01 0.09 0.15 4.71 8.65 6.18 2.86 35.04 80.29 76.54 17.15 16.94 14.73 18.05
48.28 51.0 46.35 55.68 62.51 59.92 73.41 70.4 70.98 66.08 56.63 54.16 25.24 25.78 36.8 31.65 45.73 35.42 46.96 0.59 1.55 0.96 44.14 45.27 24.65 75.93 91.66 101.69 50.66 53.5 43.48 36.38
Smo145357 (RNR1)
 17.57 20.72 23.6 28.92 35.03 39.43 42.96 51.15 39.52 33.87 29.4 25.71 12.97 9.82 27.8 14.8 20.85 17.01 21.46 6.54 4.29 8.05 18.96 17.42 15.45 28.42 64.67 68.32 22.72 25.83 12.44 12.29
Smo146160 (SAMT1)
 42.93 37.77 42.85 47.89 60.78 62.51 70.32 72.89 71.09 59.84 55.64 48.59 17.41 25.03 40.79 21.79 47.38 27.13 39.35 16.2 11.71 17.97 33.53 35.27 36.61 59.26 78.27 82.64 58.45 56.07 23.34 20.15
58.87 59.48 75.09 92.31 115.39 116.05 109.11 94.39 72.11 59.96 56.07 53.51 12.25 8.39 4.89 15.29 78.65 66.89 56.79 3.77 7.78 11.41 69.84 51.31 35.73 106.26 181.31 226.17 71.46 68.55 36.54 31.6
146.73 149.59 160.24 170.57 195.38 187.93 190.48 199.16 176.86 138.51 147.88 142.3 75.98 105.69 68.8 96.42 148.91 145.74 157.09 0.0 3.7 0.0 121.71 119.83 32.52 231.22 355.06 369.27 151.82 159.36 131.72 150.22
Smo154280 (OVA1)
 40.05 34.86 40.57 46.89 52.18 63.56 67.66 73.58 58.71 54.33 49.85 43.09 23.58 23.01 22.69 26.38 40.53 30.28 34.14 4.42 7.64 14.08 32.42 31.71 23.18 61.57 130.08 126.17 39.2 43.02 34.96 34.67
Smo156007 (AGY1)
 155.17 179.42 222.36 260.49 271.18 250.73 264.42 284.38 219.23 206.68 198.34 174.46 33.94 67.26 37.38 57.49 224.2 103.95 139.62 16.48 33.79 3.5 162.03 132.04 197.1 324.89 463.32 497.26 193.12 190.11 234.96 209.74
45.94 41.17 40.53 47.17 54.65 62.74 70.26 83.08 68.09 64.04 53.46 50.1 10.3 12.5 28.64 16.26 38.48 25.55 39.26 3.02 11.42 3.55 30.63 26.32 43.72 63.93 162.52 149.87 40.97 40.77 37.25 34.99
Smo166436 (EX1)
 69.3 66.25 73.43 84.57 98.62 92.37 116.88 133.4 123.7 111.23 108.13 96.33 38.57 37.06 48.33 42.28 69.27 42.01 65.23 17.8 18.94 20.53 55.77 49.5 77.05 128.42 157.96 182.06 80.24 76.75 59.1 58.85
Smo166773 (EMB2083)
 24.24 25.03 26.61 31.14 36.19 40.22 32.21 33.44 28.81 25.89 24.75 20.85 17.44 12.56 22.73 17.85 24.92 16.12 23.79 2.92 2.74 0.88 19.83 19.31 10.15 29.89 52.71 56.7 22.24 22.83 11.52 13.7
Smo172681 (ERS)
 57.5 51.57 53.07 65.28 68.87 68.32 67.52 71.52 74.47 61.75 62.73 60.99 22.14 36.81 33.95 22.85 59.23 42.92 47.79 12.92 21.53 3.27 43.99 44.93 44.39 68.75 106.68 122.55 51.5 55.52 46.44 45.41
55.71 57.31 61.88 71.64 70.28 63.97 76.03 82.02 74.26 77.06 69.23 65.95 23.19 21.39 23.4 32.03 45.28 26.08 53.45 3.71 5.89 6.83 37.71 30.76 15.79 100.07 101.8 112.72 54.69 54.25 39.78 38.27
Smo186974 (RNL)
 46.49 48.68 49.47 54.15 58.64 69.21 76.92 89.11 73.59 67.42 57.78 53.95 17.02 15.99 39.85 24.44 45.72 35.05 47.17 10.02 6.33 10.28 36.42 32.84 16.46 59.2 103.27 106.4 48.12 48.87 33.03 26.63
Smo20706 (EMB1865)
 19.34 23.08 26.33 25.83 30.09 29.13 32.79 30.8 29.57 28.22 26.05 22.4 8.5 8.63 13.9 11.16 20.06 12.43 21.12 2.55 0.62 0.44 18.15 14.85 0.91 58.73 67.33 78.01 21.72 21.22 16.86 16.37
Smo231207 (LAC11)
 6.12 5.17 4.24 4.85 7.11 8.34 7.7 11.55 9.14 9.76 8.68 5.7 1.84 1.44 3.52 2.8 4.35 4.82 5.01 0.0 0.0 0.0 3.99 3.83 2.37 14.29 17.74 19.65 5.94 5.71 6.46 5.71
62.02 70.71 74.82 83.52 83.67 92.98 87.22 85.31 71.15 69.44 56.04 61.02 23.82 18.64 34.25 30.62 58.0 33.96 48.68 5.51 28.07 5.91 57.55 43.24 57.08 70.2 138.94 121.38 55.29 54.14 37.08 35.35
28.63 29.02 26.61 29.85 34.15 31.2 33.74 31.07 34.36 31.11 32.97 27.73 18.3 25.21 31.81 20.02 34.04 30.68 27.15 6.97 5.38 5.01 29.46 26.19 20.86 44.95 61.97 62.06 28.85 31.71 24.56 21.23
9.05 10.45 11.48 14.73 15.74 15.36 15.35 14.42 12.49 10.35 9.87 8.85 4.67 5.53 6.49 5.27 10.97 4.95 8.6 1.01 5.37 1.64 7.94 6.98 5.29 12.99 23.61 29.71 9.74 10.58 6.33 5.58
26.04 25.01 23.11 26.81 34.4 27.8 28.63 29.91 32.63 26.56 25.21 25.72 10.77 12.68 14.2 15.58 26.39 19.15 27.3 3.23 2.51 1.23 21.57 19.67 9.67 33.77 49.22 45.54 26.55 26.77 20.25 21.67
Smo405767 (EMB36)
 37.83 46.44 56.0 68.77 74.34 82.42 86.66 78.89 68.39 57.62 50.52 41.91 28.15 33.26 47.68 28.04 46.69 18.48 44.25 4.48 6.85 1.01 48.62 46.19 22.42 35.86 136.24 153.14 45.47 50.26 43.29 38.93
98.22 147.0 140.54 177.37 179.61 160.66 131.32 120.92 104.04 90.77 78.07 81.37 25.61 26.89 19.26 35.23 92.18 49.55 72.47 0.39 3.0 0.07 87.93 72.84 23.02 122.06 238.82 266.09 65.93 69.21 47.26 46.35
178.69 186.11 243.3 310.67 337.13 330.77 359.82 400.19 319.55 275.21 246.72 206.99 34.7 53.14 57.09 58.24 217.16 132.05 131.94 11.81 25.99 9.97 148.09 109.45 54.65 556.56 582.55 614.8 191.44 185.29 146.32 126.55
Smo410877 (SPD1)
 17.71 15.56 16.34 17.86 18.63 19.65 21.48 23.97 27.74 27.68 23.99 21.05 1.61 5.9 7.51 3.37 15.04 8.2 12.36 0.8 2.71 1.89 11.05 8.63 8.36 19.71 47.94 42.21 15.02 15.3 12.77 11.94
26.53 23.18 25.07 26.0 27.68 25.38 29.19 31.49 28.99 28.34 26.02 23.44 12.4 8.11 15.3 11.83 18.14 13.81 19.96 0.22 0.01 1.64 15.17 12.77 3.03 28.6 41.51 42.99 20.16 21.84 18.39 19.1
21.5 31.7 30.06 27.47 28.98 31.36 31.44 23.89 20.0 18.26 18.74 19.7 9.62 5.77 22.85 12.84 20.22 13.84 16.77 0.67 0.45 0.45 14.51 11.93 13.01 23.54 45.56 44.38 18.34 17.6 12.52 13.0
15.01 14.95 14.17 17.32 17.78 20.15 21.84 26.09 20.74 19.58 17.05 17.52 6.79 4.33 13.42 7.57 16.53 11.43 11.13 2.22 1.26 2.37 10.63 9.91 18.94 22.87 36.48 34.67 16.1 15.21 14.95 14.2
26.23 23.9 27.15 29.32 29.37 32.23 34.55 34.39 30.83 28.98 25.21 22.98 16.38 14.37 23.25 19.62 23.16 18.34 23.15 1.89 8.03 0.79 15.27 16.21 13.4 36.65 40.31 37.23 23.26 23.56 18.02 18.58
57.53 53.68 52.22 61.58 66.92 63.53 77.35 68.79 69.49 66.16 61.23 57.14 27.22 30.34 37.89 36.13 77.34 48.38 50.9 1.38 18.78 7.59 50.04 48.6 10.82 55.92 101.07 115.25 71.73 77.04 52.71 49.37
Smo437676 (OVA2)
 7.75 9.51 10.27 12.19 13.38 12.36 17.47 18.72 18.5 18.34 17.28 14.07 2.21 2.95 1.94 3.56 14.06 6.24 9.07 0.67 1.76 0.35 8.83 6.02 2.36 13.17 28.01 29.13 15.79 13.89 9.42 8.12
Smo438142 (GR)
 35.56 36.09 36.22 37.43 44.08 44.22 50.34 51.17 42.69 41.26 38.26 34.3 26.13 28.6 28.22 27.5 26.75 20.46 26.63 6.25 5.58 2.34 20.91 23.3 17.17 43.04 61.29 58.89 26.38 24.72 31.79 26.15
Smo438805 (PTAC10)
 19.22 20.74 22.99 24.6 34.0 37.5 46.21 45.19 37.51 28.14 24.16 19.64 11.4 8.82 19.51 12.29 24.84 16.4 17.98 1.39 7.85 4.49 18.17 16.11 17.75 28.51 86.1 87.77 26.62 30.5 16.83 12.29
109.86 151.02 157.05 164.19 161.95 157.72 146.12 145.1 103.48 96.64 88.27 88.5 62.41 57.94 66.62 81.1 110.03 58.48 119.14 1.78 5.18 0.43 92.01 79.83 31.74 170.63 244.34 286.16 86.07 89.11 57.82 50.59
91.21 80.76 102.32 121.73 137.37 152.09 166.42 155.76 155.0 131.08 135.76 106.53 24.49 57.98 42.1 32.25 142.41 97.99 67.33 18.58 17.24 14.26 93.02 85.8 28.11 131.51 219.0 229.99 132.63 130.3 79.16 53.74
Smo442211 (EMB2761)
 39.66 40.58 40.33 46.02 48.91 50.19 50.97 53.84 49.26 48.81 42.15 38.87 20.77 22.44 24.52 27.85 31.92 19.45 32.12 1.04 2.09 0.6 23.56 22.51 6.34 68.61 73.8 81.93 33.71 35.47 24.54 22.84
31.88 34.71 44.16 56.89 67.6 69.71 84.38 88.57 64.57 59.98 50.52 39.84 28.86 26.18 54.4 30.46 41.99 21.82 38.11 5.51 3.1 2.5 37.28 35.1 8.12 92.33 129.53 126.46 43.2 42.93 39.95 44.23
Smo45172 (SVR1)
 40.1 48.06 54.69 59.84 60.1 57.42 55.78 50.0 44.27 39.82 39.36 37.34 28.53 18.92 44.18 29.45 54.53 36.39 50.02 0.38 4.3 5.59 37.85 39.3 40.03 52.7 78.71 100.3 49.95 50.84 30.99 32.26
30.45 31.34 31.39 38.02 60.11 58.44 63.49 64.43 47.04 40.09 31.47 29.48 3.73 3.29 6.44 9.8 39.81 42.73 36.43 1.34 7.28 1.23 34.11 29.65 37.74 42.57 108.49 119.08 49.81 48.08 31.16 24.95
Smo60327 (MIM)
 17.87 18.27 21.47 31.3 32.36 33.29 39.09 46.06 39.46 36.64 33.4 28.73 13.8 15.24 29.69 12.84 18.91 10.39 22.55 3.27 2.22 3.98 18.6 18.88 12.71 44.7 76.34 68.39 19.99 21.13 25.76 25.63
42.39 43.84 49.85 47.32 52.66 52.21 57.87 53.93 56.47 47.34 43.94 41.53 22.08 18.82 34.4 23.06 45.24 31.95 40.56 0.21 0.95 0.28 37.92 27.99 2.78 39.51 71.38 77.78 44.9 45.74 29.09 29.69
167.75 157.7 163.36 181.57 196.31 199.12 212.54 193.77 191.72 174.02 162.94 163.96 98.35 99.23 94.74 114.78 203.07 156.67 193.98 11.78 35.24 8.47 165.69 157.01 146.13 193.81 212.76 259.87 204.98 202.32 153.24 137.65
47.83 45.81 55.86 66.94 72.26 63.37 64.45 62.73 56.75 46.85 42.25 46.44 28.46 41.31 53.81 37.68 57.73 39.0 45.57 5.86 5.29 2.12 42.65 37.31 14.44 48.32 109.69 125.47 49.37 48.29 38.56 40.15
9.18 11.57 13.51 16.07 21.09 21.31 28.64 27.47 23.8 18.84 15.79 12.71 9.64 8.5 8.9 10.16 12.24 8.72 14.63 0.0 0.18 0.0 12.13 10.52 2.31 29.68 41.2 38.83 16.13 17.1 6.55 7.62
43.09 47.18 49.8 55.4 54.8 65.67 66.76 55.97 50.42 41.54 40.1 39.18 1.31 5.64 15.56 6.72 40.68 18.12 44.89 2.4 15.37 22.4 25.11 25.28 41.54 45.03 115.15 130.58 36.05 37.52 23.47 20.9
Smo75404 (ATM1)
 22.43 28.91 30.78 36.53 34.36 36.25 29.5 30.14 22.35 21.06 17.15 20.87 9.24 11.96 14.67 14.4 23.59 21.07 23.31 0.53 7.64 1.85 17.96 16.19 25.59 27.59 55.58 53.26 21.99 22.04 18.92 19.27
66.51 84.29 89.79 107.28 128.72 130.78 137.46 165.32 131.25 119.72 110.81 102.46 20.98 17.9 25.99 23.39 78.48 51.14 51.33 10.01 43.14 14.41 53.58 42.54 108.54 120.21 272.23 265.09 77.92 71.0 62.55 58.89
124.19 131.25 140.72 141.39 163.06 156.4 170.11 165.1 139.86 139.66 129.93 124.69 87.11 71.11 81.74 71.14 83.25 78.23 84.46 9.22 24.33 8.31 78.85 75.88 46.38 165.47 232.36 239.01 93.7 92.82 62.64 58.59
77.42 73.58 79.81 105.22 114.2 158.91 181.11 186.52 143.75 115.44 100.81 88.21 10.44 35.69 32.3 15.32 97.78 61.33 30.77 10.88 15.72 16.33 49.72 32.63 60.83 51.02 347.78 336.41 76.27 76.71 65.83 47.3
Smo79851 (OVA5)
 31.34 31.79 33.97 39.41 43.23 43.67 47.95 53.28 52.1 43.58 47.1 39.65 20.72 22.75 31.11 23.35 30.05 19.7 27.37 3.32 11.47 2.07 27.45 29.5 23.02 52.18 63.08 71.44 29.45 33.04 30.14 27.96
173.1 163.29 163.45 197.78 223.33 214.89 267.85 303.34 264.38 243.46 223.17 221.47 33.24 47.33 38.15 51.15 191.25 100.63 117.29 35.98 48.77 12.64 124.34 87.73 146.42 286.69 424.29 433.88 194.1 189.92 194.03 155.88
Smo81522 (EMB36)
 39.92 46.42 51.49 66.25 76.46 81.63 81.64 83.65 69.5 57.22 51.1 43.96 21.49 31.27 52.56 23.44 44.99 25.85 40.17 0.98 3.68 1.02 38.91 40.33 19.42 47.18 143.86 158.53 43.99 49.39 26.13 20.78
69.63 64.38 84.23 89.38 83.7 97.06 98.35 111.56 96.43 72.66 71.46 68.32 12.35 23.81 37.36 20.72 71.95 67.39 41.05 22.22 23.14 5.33 41.79 38.19 94.42 57.76 237.08 222.14 70.09 72.51 61.27 52.94
12.24 16.6 16.79 24.74 27.58 27.99 38.21 40.48 33.81 29.88 22.12 21.03 10.18 8.51 14.67 9.63 21.08 14.14 17.59 1.46 0.5 2.52 18.17 16.4 10.56 30.39 49.07 46.31 22.19 25.23 16.62 18.86
Smo85469 (TAPX)
 139.91 126.26 128.56 140.98 171.16 156.92 174.18 182.48 165.76 149.56 155.59 152.34 25.64 28.21 37.26 32.81 112.14 82.04 67.12 19.08 44.98 24.06 78.19 69.54 142.9 171.21 319.9 342.9 111.3 111.69 135.36 160.67
48.02 46.73 47.57 46.19 47.22 47.35 52.87 52.42 49.37 45.17 39.67 42.23 28.8 25.49 16.8 32.67 42.68 24.76 24.2 1.48 1.33 0.0 25.09 19.01 11.78 55.1 83.17 99.15 39.2 41.89 22.02 19.21
36.64 39.99 38.11 40.18 45.38 47.09 47.28 47.34 46.34 42.99 38.88 35.64 15.98 14.77 31.48 18.04 28.82 21.83 29.09 0.59 3.99 2.9 20.31 24.27 17.48 50.01 93.21 100.17 29.91 33.45 23.97 27.05
95.5 94.93 123.19 142.56 162.03 177.2 155.3 152.32 135.6 119.0 107.25 105.32 30.58 40.24 31.49 36.67 151.24 114.4 78.13 13.1 64.52 14.1 81.64 67.83 148.37 167.35 273.25 279.24 120.87 119.52 92.11 89.47
62.11 81.98 85.58 88.14 79.87 82.0 83.71 79.09 69.11 65.9 65.49 57.93 41.0 43.3 30.14 47.73 58.02 32.07 37.96 9.95 5.42 9.93 57.26 48.87 42.24 95.15 130.9 156.04 49.35 53.52 31.97 30.35
37.42 42.28 42.6 46.12 52.59 46.84 41.5 47.54 44.12 37.06 38.4 32.46 13.31 14.61 15.84 23.09 40.75 21.74 37.28 1.25 4.02 4.94 31.17 27.37 23.18 51.64 82.68 100.07 38.16 39.35 20.37 20.66
35.03 36.85 47.25 55.67 55.82 63.09 72.41 78.38 70.58 62.44 59.84 48.63 15.35 14.8 19.47 17.72 43.22 27.17 26.72 2.85 1.75 13.95 29.39 24.48 18.99 71.6 98.45 100.93 38.23 35.4 23.33 24.21
64.31 63.41 74.38 76.87 78.87 84.38 87.36 90.84 78.39 66.54 63.88 67.06 20.94 19.46 14.76 21.41 70.08 41.55 56.02 4.37 16.8 0.47 50.89 40.71 94.27 74.89 146.8 174.22 71.39 77.71 49.63 42.22
7.24 7.82 8.53 9.69 10.55 12.53 13.1 14.39 10.63 12.06 8.9 8.35 6.09 4.15 6.45 6.34 6.53 4.7 10.97 0.0 2.31 0.0 7.28 7.31 1.97 16.17 22.98 21.11 7.08 7.03 9.57 10.82
Smo94171 (OVA6)
 25.9 28.11 29.51 36.37 33.98 37.33 42.07 40.22 36.22 33.11 31.4 26.37 14.47 25.01 28.42 15.34 32.87 18.73 18.91 9.28 10.69 5.69 17.48 16.81 24.09 27.46 69.0 76.65 24.12 26.05 24.47 18.64
18.13 17.91 16.55 20.3 23.31 20.66 22.4 23.02 20.14 17.13 16.17 17.35 3.88 4.57 3.89 9.06 20.93 11.78 20.31 0.0 0.52 0.0 13.07 10.65 10.12 15.17 28.36 33.58 23.28 22.76 19.03 17.13
35.34 39.22 42.29 45.22 46.06 45.68 49.35 53.36 50.89 49.93 46.49 41.53 22.2 23.74 29.53 22.59 35.64 19.02 31.24 9.29 7.54 0.3 25.98 21.72 8.67 44.12 67.46 82.52 37.56 37.61 23.87 19.91

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)