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Heatmap: Cluster_9 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo100599 (ACR3)
 -0.15 -0.17 0.07 0.02 0.09 0.24 0.62 -0.18 -0.05 -0.03 -0.07 -0.23 0.36 0.5 1.79 0.55 0.05 0.05 0.32 -2.45 -4.39 -2.93 -0.23 -0.29 -2.74 -1.12 -0.87 -0.86 0.52 0.65 0.17 -0.12
-4.94 -4.62 -6.47 -5.23 -4.52 -4.67 -4.91 -5.83 -6.34 -5.22 -5.96 -5.55 0.71 1.65 3.05 0.8 0.62 0.01 1.06 -1.56 -2.21 -0.37 0.61 0.71 -2.55 -0.62 0.02 0.08 0.36 0.38 0.21 0.16
0.1 0.53 0.76 0.45 0.54 0.65 -0.07 -0.29 -0.3 -0.48 -0.22 -0.33 0.15 0.33 1.96 0.11 0.03 -0.31 -1.76 -6.26 -2.38 -1.23 0.52 0.47 -2.24 -0.44 0.17 0.48 -1.08 -0.72 -1.06 -1.03
Smo105194 (IMK2)
 0.47 0.36 0.56 0.59 0.87 0.7 0.73 0.01 0.7 0.58 0.44 0.36 -0.95 -2.63 2.02 -0.68 0.54 0.11 -0.4 -2.73 -3.2 -0.62 -0.51 -1.26 -6.51 -1.74 -1.89 -1.27 -0.33 -0.22 -0.69 -0.91
-0.24 -0.35 0.08 0.03 0.9 0.79 0.68 0.55 0.62 0.5 0.4 -0.04 -0.99 -1.41 1.86 -0.23 0.55 0.69 -0.75 -2.45 -5.5 0.26 -0.66 -1.9 - -1.77 -0.28 -1.14 0.26 0.1 -0.51 -0.99
0.36 0.44 0.66 0.58 0.64 0.62 0.55 0.02 0.49 0.34 0.39 0.12 -1.65 -1.19 1.65 -0.72 0.79 0.09 -1.21 -1.2 -1.75 0.05 -1.49 -1.84 -3.7 -1.3 -1.46 -0.9 0.07 0.34 -0.11 -0.19
-0.38 -0.16 -0.17 -0.06 -0.14 -0.12 0.25 -0.09 0.33 0.24 0.18 -0.08 0.86 0.29 1.52 0.64 -0.02 -0.58 -0.37 -2.39 -0.87 -0.79 0.58 0.66 -2.84 -0.48 -0.46 -0.2 -0.22 0.02 -0.48 -0.56
-0.19 0.22 0.56 0.39 0.63 1.0 0.48 0.04 0.04 -0.26 -0.63 -0.68 -0.24 0.28 2.07 0.47 0.05 -0.3 -0.38 - - -2.96 -0.27 -0.94 -2.85 -0.58 0.51 1.09 -0.41 -0.18 -2.68 -2.51
Smo156847 (VDAC1)
 -0.37 -0.11 -0.13 -0.06 0.02 0.04 0.08 -0.37 -0.33 -0.36 -0.47 -0.47 0.43 0.84 1.68 0.33 0.21 -0.08 0.76 -0.02 -0.86 0.24 -0.34 -0.28 -0.73 -1.32 -0.6 -0.65 -0.1 0.08 -0.42 -0.41
Smo158820 (RABA1f)
 -0.23 0.12 0.22 0.12 -0.04 0.32 0.0 -0.13 -0.15 -0.09 0.15 -0.28 0.33 0.49 1.41 0.5 -0.15 -0.3 0.3 -1.56 -3.08 -0.45 0.33 0.27 -0.62 -1.14 -0.65 -0.55 0.08 0.28 -0.37 0.13
-0.12 0.17 0.23 0.24 0.48 0.55 0.5 0.41 0.13 -0.1 -0.18 -0.4 -0.19 0.11 1.76 0.13 -0.21 -0.33 0.1 -0.76 -1.82 -0.27 -0.47 -0.31 -2.38 -0.22 0.34 0.12 -0.54 -0.44 -0.78 -0.94
Smo168384 (HMT2)
 -0.15 -0.25 -0.1 -0.02 0.19 0.04 0.06 0.07 0.06 -0.09 -0.12 -0.27 0.22 0.24 1.42 0.85 0.0 -0.22 0.52 -2.49 -4.13 -2.01 0.4 0.79 -1.15 0.05 -0.2 -0.14 0.01 0.08 -0.4 -0.72
-0.46 -0.16 -0.11 -0.18 0.11 0.16 0.03 -0.3 -0.55 -0.72 -0.86 -1.04 0.37 0.68 1.8 0.41 0.17 -0.39 0.6 -0.62 -1.46 -0.84 0.2 0.3 -0.62 -0.75 0.26 0.1 -0.1 -0.03 -0.16 -0.27
-0.48 -1.84 -0.91 -0.79 -0.83 -0.42 0.62 0.37 -1.72 0.28 0.23 0.06 1.3 0.05 3.04 -0.03 -1.74 -0.53 -3.8 - - -2.65 1.96 0.72 -1.78 -1.6 -1.57 - -1.64 -1.38 -1.2 -1.17
0.23 0.29 0.39 0.34 0.24 0.13 0.39 0.09 0.66 0.7 0.63 0.51 -0.67 0.36 1.79 -0.55 0.33 0.35 -1.62 -1.16 -1.88 -0.13 -1.34 -0.94 -3.47 -1.08 -2.08 -1.66 -0.3 -0.04 0.02 -0.27
0.33 0.25 0.3 0.33 0.71 0.4 0.32 0.42 0.74 0.88 0.61 0.36 -0.61 -0.08 1.61 -0.33 0.07 -0.11 -0.43 -4.17 -4.08 -2.34 0.05 -0.45 -6.16 -0.75 -1.1 -1.53 -0.12 0.03 -0.69 -0.03
-0.52 -0.39 -0.12 -0.0 0.14 0.46 0.33 0.16 0.2 0.14 -0.19 -0.28 0.25 0.31 1.36 0.54 0.02 -0.19 0.57 -1.64 -1.92 -1.85 0.19 0.33 -2.26 -0.12 -0.54 -0.49 0.27 0.19 -0.01 -0.21
Smo268420 (PRS3)
 -0.07 0.02 0.02 0.0 0.0 0.17 -0.12 0.05 0.25 0.03 0.09 -0.19 0.44 0.07 1.52 0.17 -0.08 -0.39 -0.1 -1.25 -1.36 -0.38 0.59 0.79 -1.21 -0.44 -0.56 -0.51 -0.36 -0.28 -0.41 0.01
Smo36118 (P40)
 -0.1 0.11 0.31 0.18 0.49 0.51 0.4 0.32 -0.04 -0.29 -0.29 -0.56 0.07 0.15 2.02 0.28 0.16 0.2 0.32 -3.88 -5.18 -4.21 -0.08 0.08 -4.43 -1.0 -0.2 -0.32 -0.18 -0.1 -0.08 -0.2
-0.29 -0.17 -0.03 0.02 0.14 -0.0 0.35 0.22 0.16 0.22 -0.15 -0.29 -0.03 0.22 1.41 0.08 0.08 0.06 0.1 -1.09 -0.86 -6.19 0.13 -0.0 -0.4 -0.43 0.27 0.14 -0.06 -0.12 -0.26 0.07
-0.03 0.03 0.33 0.27 0.26 0.62 0.46 0.57 0.56 0.59 0.85 0.56 -1.44 -2.32 2.0 -0.25 0.43 -0.51 0.25 -5.11 -1.27 -5.75 -1.34 -2.22 -1.91 -0.84 -1.16 -0.61 0.18 0.44 -0.37 -0.37
-0.02 -0.04 0.16 0.12 0.16 0.14 0.45 0.32 0.52 0.51 0.55 0.18 -1.59 -1.9 1.86 -0.5 0.25 -0.51 -0.51 -2.2 -3.59 -0.29 -0.81 -0.9 -2.27 0.54 -0.12 0.36 -0.01 0.08 -0.21 0.01
-0.26 -0.24 0.01 0.36 0.61 0.24 0.12 0.03 -0.53 -0.08 -0.31 -0.72 0.75 0.89 2.43 1.19 0.61 -0.99 1.09 - -3.84 - -1.88 -1.83 - -2.13 -2.34 -2.36 -0.02 0.54 -0.66 -1.11
-0.22 0.07 1.4 0.89 0.5 0.8 0.69 -0.19 0.01 0.14 -0.86 -0.46 0.29 0.76 1.96 0.82 0.03 -1.08 -0.09 - - - -0.3 -1.32 - -1.93 -0.18 -0.59 -0.51 0.03 -1.5 -1.18
0.61 0.63 0.79 0.56 1.0 0.63 0.55 0.3 0.72 0.77 0.78 0.45 -1.61 -3.37 1.76 -0.72 0.02 -0.19 -2.15 -1.17 -2.98 -0.3 -3.59 -3.17 -5.31 -0.42 -0.78 -0.44 -0.88 -0.55 -0.36 -0.23
-0.3 -0.2 -0.32 0.24 0.08 -0.02 -0.24 0.11 0.3 0.38 0.26 -0.07 1.01 -0.47 2.02 0.76 -1.47 -1.55 0.07 -7.26 -4.07 - 0.85 0.89 -2.35 0.49 -0.15 -0.17 -0.83 -0.74 -0.82 -0.76
-0.04 0.07 0.31 0.23 0.38 0.45 0.5 0.24 0.7 0.57 0.64 0.24 -1.68 -2.75 1.69 -0.03 0.24 -0.08 -1.33 -0.8 -1.63 -0.26 -1.09 -1.18 -3.2 0.2 -0.99 -0.98 -0.3 0.02 0.46 0.19
Smo412774 (CYCD1;1)
 -0.11 -0.1 -0.01 0.2 0.06 0.29 0.18 0.05 0.54 0.62 0.53 0.17 -0.35 -0.89 1.94 0.04 0.34 0.1 -0.11 -1.44 -3.5 -1.2 -0.8 -0.17 -6.16 -0.89 -1.44 -0.94 -0.14 0.12 0.45 0.46
-0.0 -0.15 0.24 0.61 0.36 0.41 0.5 -0.12 -0.06 0.27 0.11 0.22 -1.86 -1.83 2.13 -1.21 0.87 -0.54 0.23 -1.46 -5.45 -1.1 -0.75 -1.44 -1.12 -0.32 0.2 0.54 0.02 0.31 -0.74 -1.15
0.0 0.15 0.12 0.06 0.13 0.25 0.26 0.16 -0.07 0.03 -0.14 -0.18 -0.2 -0.15 1.17 0.13 -0.22 -0.3 0.21 -0.18 -0.2 -0.57 -0.35 -0.31 -0.6 0.28 0.19 0.24 -0.15 -0.0 -0.57 -0.59
Smo66631 (EB1A)
 -0.95 -0.99 -0.32 -0.51 -0.03 -0.23 -0.41 -0.74 -0.75 -0.55 -0.66 -0.92 0.06 0.68 2.63 0.52 0.13 -0.11 -0.02 -3.95 -5.56 -3.39 1.09 1.56 -2.91 -1.22 -0.4 -0.1 -0.3 0.01 -0.94 -0.47
-0.42 -0.19 -0.67 -0.14 -0.24 -0.13 0.13 -0.78 -0.44 -0.39 -0.61 -0.54 -0.68 -2.13 2.52 -0.08 1.2 0.52 1.05 -2.2 -0.57 -5.56 -1.58 -1.68 -1.34 -2.71 -0.83 -0.97 0.25 0.36 0.84 0.83
0.32 0.17 0.46 0.37 0.71 0.35 0.54 -0.07 0.32 0.4 0.57 -0.0 -1.3 -0.16 1.83 -0.61 0.43 0.57 -0.45 -5.18 -4.43 -0.85 -0.79 -1.3 -5.1 -0.09 -0.37 -0.31 -0.25 -0.09 -0.29 -0.39
0.2 0.29 0.49 0.36 0.68 0.45 0.45 0.22 0.67 0.48 0.73 0.16 -0.94 -0.53 1.98 -0.31 0.54 0.65 -1.15 -6.72 -6.75 - -1.42 -1.87 - -0.84 -0.8 -0.54 -0.03 0.3 -0.37 -0.35
-0.27 -0.25 0.21 0.69 0.7 1.0 0.88 -0.28 0.13 0.05 0.03 -0.33 -0.13 0.11 2.1 -0.06 0.3 -0.06 -0.56 -1.1 -1.26 -0.5 -2.49 -2.75 -3.61 -0.57 -0.1 0.24 -0.93 -0.47 -0.89 -0.7
Smo77198 (MLO14)
 -0.42 0.0 -0.03 0.11 -0.04 -0.07 0.23 0.64 0.73 0.89 0.78 0.27 -0.73 -0.85 2.2 0.4 -0.08 -0.49 -0.37 -2.37 -4.48 -0.39 -0.27 -1.66 -2.21 -0.14 -0.9 -0.54 -0.27 -0.11 -0.33 -0.89
0.06 0.54 0.52 0.45 0.65 0.41 -0.09 -0.41 -0.01 -0.17 -0.14 -0.56 -0.01 0.55 2.09 0.18 -0.05 -0.09 -1.67 -3.47 -2.95 0.19 0.61 0.62 -2.2 -1.04 -0.52 -0.44 -1.07 -0.72 -1.06 -1.14
-0.88 -0.15 -0.07 -0.43 0.67 0.4 -0.48 -1.22 0.16 0.06 -0.39 -0.73 1.09 -0.91 2.55 0.71 0.65 0.06 -0.28 - - - -1.72 -1.25 - -4.53 -1.91 0.15 0.05 0.4 0.61 0.72
Smo86240 (NP3)
 -0.38 -0.31 -0.23 -0.17 -0.05 -0.2 0.36 0.4 0.57 0.57 0.55 0.43 -0.6 -0.44 1.96 -0.15 -0.27 -0.3 0.03 -1.39 -4.02 -5.36 -0.95 -0.98 -2.74 0.64 0.33 0.4 0.07 -0.04 -0.23 -0.06
-0.5 -0.12 0.12 0.25 0.95 1.05 0.79 0.22 0.2 0.1 -0.26 -0.54 -0.45 -1.4 2.09 -0.32 -0.07 -0.22 -0.2 -0.91 -2.08 -2.14 -0.76 -0.62 -3.84 -0.97 0.69 0.49 -0.2 0.17 -1.55 -1.21
0.39 0.0 -0.24 0.03 0.22 0.11 0.23 0.27 0.69 0.51 0.67 0.54 -1.66 -0.98 1.62 -1.25 0.07 -0.42 -1.5 -0.92 -1.66 -0.08 -1.08 -1.31 -1.33 0.12 0.36 0.14 -0.32 -0.21 0.07 0.51
Smo93135 (GPP1)
 -0.55 0.41 0.36 0.18 0.49 0.5 0.25 0.09 0.08 -0.09 -0.08 -0.47 -0.19 0.65 1.79 0.06 -0.04 -0.61 -0.15 -2.04 -0.19 -0.69 0.24 0.17 -0.83 -0.62 -0.5 -0.07 -0.15 -0.11 -1.25 -2.2
-0.74 -0.5 -0.05 -0.3 -0.02 -0.06 -0.06 -0.55 -0.35 -0.45 -0.19 -0.96 -0.07 0.44 1.93 0.2 0.62 0.74 0.33 -1.58 -1.31 -4.44 0.33 0.23 -0.69 -1.55 -0.29 -0.41 0.07 0.32 0.39 0.42
-0.55 -0.43 -0.38 -0.28 -0.08 -0.02 -0.05 -0.11 -0.29 -0.38 -0.59 -0.6 0.41 0.59 1.82 0.41 -0.02 -0.51 0.4 0.14 -0.25 -0.14 0.17 0.39 -0.36 -0.5 -0.47 -0.81 -0.22 -0.21 -0.22 -0.19
-0.01 -0.2 0.3 -0.07 0.09 -0.37 -0.01 -0.05 0.34 0.46 0.32 0.07 -0.41 0.23 2.08 1.06 0.0 -0.45 -0.78 -3.52 -5.75 -2.15 0.07 0.5 -3.69 -0.97 -0.6 -0.95 0.13 0.39 -0.16 -0.35
0.29 0.27 0.52 0.45 0.5 0.61 0.61 0.36 0.81 0.74 0.64 0.39 -1.37 0.13 1.9 -0.82 0.11 -0.69 -0.98 -2.12 -5.22 -1.86 -1.91 -2.01 -4.71 -1.57 -0.86 -0.61 -0.29 0.01 0.24 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.