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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Smo101522 (AGL15) | - | - | - | - | - | - | - | - | - | - | - | - | 0.64 | - | - | 2.09 | -1.25 | 0.47 | 2.91 | - | 0.03 | - | 0.19 | 1.14 | - | - | - | - | 1.43 | 0.82 | 1.64 | 2.3 |
Smo102871 (FUT4) | -1.19 | -1.21 | -1.61 | -1.59 | -2.68 | -2.97 | -1.65 | -1.43 | -2.02 | -0.36 | -1.15 | -0.07 | 0.53 | -2.12 | -2.03 | 1.68 | 0.44 | 1.38 | 2.06 | -1.94 | - | - | 0.66 | 1.17 | -0.13 | -0.8 | -2.45 | -0.5 | 1.0 | 0.96 | 0.79 | 0.73 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.22 | 1.25 | - | 3.08 | - | - | - | - | - | - | - | - | - | 2.26 | 1.2 | 2.84 | 1.19 | |
| -8.39 | -8.63 | -7.53 | -7.58 | -5.97 | -7.24 | -6.69 | -7.43 | -7.23 | -4.62 | -7.41 | -8.12 | -0.27 | -0.52 | -1.3 | 1.38 | 0.1 | 1.3 | 1.12 | -1.81 | -0.74 | -2.36 | 1.35 | 1.54 | -2.04 | -1.13 | -1.93 | -1.59 | 1.65 | 1.62 | 1.9 | 1.95 | |
| - | - | - | - | - | - | - | - | - | - | - | - | -1.07 | - | 1.98 | 1.24 | 1.94 | 1.97 | 0.71 | 0.01 | - | - | 0.29 | 0.01 | 1.01 | - | - | - | 1.77 | 2.24 | 0.42 | 0.13 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.35 | - | - | 1.43 | 1.18 | 0.86 | 1.75 | - | - | - | 1.36 | 1.24 | -4.96 | - | - | - | 1.96 | 1.94 | 1.79 | 1.66 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.34 | - | - | 1.68 | 0.98 | 1.62 | 2.12 | - | - | - | 1.47 | 1.38 | -2.17 | - | - | - | 1.65 | 1.13 | 1.48 | 1.65 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.54 | - | - | 0.92 | 1.37 | 1.33 | 2.13 | - | - | - | 1.28 | 0.87 | - | - | - | - | 1.6 | 2.41 | 1.46 | 1.26 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.95 | - | - | 1.55 | 1.3 | -1.8 | 1.75 | - | - | - | 1.46 | 1.21 | - | - | - | - | 2.0 | 1.76 | 2.17 | 2.04 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.34 | - | - | 1.77 | 1.39 | 0.56 | 1.4 | -0.7 | 0.61 | - | 1.42 | 1.28 | 1.22 | - | - | - | 1.56 | 1.5 | 0.95 | 1.04 | |
| -3.21 | - | - | -2.46 | - | - | - | - | -1.48 | -2.8 | - | -2.62 | 1.68 | -0.03 | -3.04 | 1.68 | 1.35 | - | 1.99 | - | - | - | 1.08 | 1.27 | - | -0.04 | - | 0.46 | 1.65 | 1.64 | 0.94 | 0.97 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.16 | - | - | 1.75 | 1.41 | 1.21 | 1.06 | - | - | - | 1.43 | 1.2 | - | - | - | - | 2.03 | 1.88 | 1.62 | 1.81 | |
| -7.35 | - | - | -5.09 | - | - | - | - | -3.35 | -6.22 | - | - | 1.57 | -3.58 | -3.21 | 1.75 | 0.71 | 1.06 | 1.63 | -4.76 | - | - | 1.23 | 1.36 | -2.76 | - | - | - | 1.68 | 1.3 | 1.87 | 2.04 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.09 | - | - | 1.35 | 1.0 | 1.08 | 1.43 | -2.39 | -1.76 | -2.12 | 1.56 | 1.8 | -2.05 | - | - | - | 1.67 | 1.4 | 1.63 | 2.07 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.1 | - | - | -0.52 | 2.2 | 1.63 | 2.93 | - | - | - | 1.01 | 0.3 | -2.66 | - | - | - | 2.08 | 1.95 | 0.53 | 1.0 | |
| -8.6 | -7.25 | - | - | -5.38 | -8.05 | -8.28 | -6.81 | - | -7.5 | - | -8.22 | 0.88 | -3.52 | -3.88 | 1.6 | 1.31 | 1.5 | 0.53 | -7.05 | - | -3.92 | 2.11 | 1.99 | -4.46 | - | - | - | 1.5 | 1.52 | 1.6 | 1.6 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.89 | - | - | 0.71 | 1.19 | 1.12 | 1.2 | -4.93 | 0.84 | -3.57 | 1.62 | 1.21 | 0.21 | - | - | - | 1.46 | 1.23 | 1.87 | 2.19 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.94 | - | - | 1.55 | 1.19 | 1.32 | 1.84 | -0.7 | -1.18 | -1.4 | 1.62 | 1.85 | -3.25 | - | - | - | 1.35 | 1.18 | 0.57 | 1.23 | |
| -2.05 | -3.55 | -2.57 | -1.89 | -1.72 | -3.23 | -1.86 | -2.62 | -2.34 | -1.75 | -1.82 | -3.31 | 1.61 | -2.45 | -2.76 | 1.86 | 0.83 | 1.49 | 1.19 | - | -5.94 | - | 1.53 | 1.78 | -2.27 | -3.01 | -4.33 | -5.04 | 1.51 | 1.21 | 0.89 | 0.88 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.29 | - | - | 1.42 | 0.95 | 1.14 | 1.53 | 0.19 | 0.05 | -0.1 | 0.82 | 0.87 | 1.25 | - | - | - | 1.04 | 1.05 | 1.69 | 1.79 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.95 | - | - | 1.42 | 1.29 | 0.55 | 1.81 | - | - | - | 0.78 | 0.89 | -1.65 | - | - | - | 2.17 | 1.97 | 1.95 | 1.93 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.13 | - | - | 1.72 | 1.35 | 1.33 | 1.84 | - | - | - | 0.98 | 1.09 | - | - | - | - | 1.68 | 1.55 | 1.99 | 1.87 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.73 | - | - | 1.93 | 1.15 | -1.33 | 2.25 | - | - | - | 1.27 | 1.36 | - | - | - | - | 1.81 | 1.85 | 1.16 | 1.66 | |
Smo404162 (PHO1) | -2.96 | -2.69 | - | -3.13 | -3.68 | -1.12 | -0.67 | -1.34 | -0.98 | -2.49 | -1.58 | -2.31 | 1.44 | -4.11 | -6.67 | 1.85 | 1.13 | 0.54 | 1.47 | - | - | - | 1.27 | 1.15 | - | -1.74 | -1.47 | -1.01 | 1.61 | 1.47 | 1.12 | 1.16 |
| -0.61 | - | - | - | - | - | - | 0.33 | - | - | -0.93 | -0.78 | -0.5 | 0.43 | 0.1 | 0.89 | 0.73 | 0.01 | 0.7 | - | 0.67 | - | 0.98 | 1.7 | - | - | -0.17 | 0.73 | 1.89 | 1.56 | -0.06 | 1.46 | |
| -0.62 | -0.84 | -2.1 | -0.4 | -1.52 | 0.22 | -0.74 | -0.09 | -1.48 | -0.09 | -1.52 | -0.84 | 1.12 | -1.1 | -0.72 | 1.3 | 0.62 | -0.24 | 1.33 | - | - | -0.19 | 0.8 | 0.89 | -3.64 | 0.21 | -0.0 | -1.47 | 0.86 | 0.88 | 0.4 | 0.92 | |
| - | -3.48 | - | - | - | - | - | -2.63 | - | - | - | -3.45 | 1.26 | -0.19 | 0.86 | 1.23 | 0.71 | 0.75 | 2.55 | - | - | - | 1.39 | 1.23 | - | 1.63 | -0.4 | 0.9 | 0.48 | -1.69 | 0.49 | 0.32 | |
Smo409777 (LOX1) | -1.58 | -0.97 | -1.22 | -1.41 | -0.5 | -0.9 | -1.78 | -0.65 | -1.54 | -0.22 | -1.02 | -1.37 | 1.41 | -0.47 | 1.2 | 1.16 | -1.59 | 0.0 | 2.4 | - | - | - | 1.27 | 1.72 | 1.14 | 0.34 | -1.33 | -1.06 | -1.15 | -1.32 | -1.69 | -1.43 |
Smo409996 (PDR3) | -1.01 | - | - | - | -0.24 | - | 0.41 | - | -1.38 | -1.55 | - | 0.07 | 1.37 | 0.69 | 0.3 | 0.7 | 1.28 | -2.19 | 2.76 | - | - | - | -0.35 | -1.45 | - | 1.34 | -0.17 | - | 0.34 | 1.64 | -1.48 | 0.85 |
| - | - | - | -4.74 | - | - | - | - | - | - | - | - | 0.72 | - | - | 1.92 | 1.09 | -0.73 | 2.91 | -0.24 | -2.76 | 0.54 | 1.01 | 0.8 | - | - | - | - | 1.43 | 1.16 | 1.33 | 1.4 | |
| - | - | - | - | -3.04 | -3.04 | - | - | - | - | - | - | 0.55 | -0.71 | -0.68 | 1.49 | 1.01 | 0.4 | 1.53 | - | - | - | 1.06 | 0.97 | 0.72 | - | -1.88 | 0.14 | 1.36 | 1.65 | 2.23 | 1.37 | |
| -1.22 | -3.68 | -1.92 | -2.05 | -3.48 | -1.0 | -2.07 | -1.13 | -0.02 | -0.36 | -0.58 | -1.68 | 0.58 | -2.76 | -1.43 | 1.75 | 1.09 | - | 2.89 | -1.65 | -0.22 | -0.98 | 1.29 | 0.59 | -1.48 | -1.42 | -2.12 | - | 0.94 | 0.27 | 0.43 | -0.05 | |
| -3.29 | -4.43 | -5.13 | -3.61 | -5.8 | - | - | -3.21 | -4.31 | -3.48 | -1.43 | -2.98 | 0.94 | -1.44 | -0.92 | -0.79 | 0.37 | -2.49 | 3.02 | -0.99 | -0.46 | - | 1.95 | 1.8 | 1.23 | -2.72 | -1.35 | -0.37 | 0.43 | 0.21 | 0.37 | 0.98 | |
| -1.46 | - | - | - | - | -0.25 | 1.0 | -0.17 | - | - | - | - | 1.04 | - | -1.13 | -0.79 | -1.1 | - | 3.08 | - | - | - | 2.21 | 3.3 | - | - | - | - | -1.09 | -1.09 | -1.13 | - | |
| -1.23 | -2.73 | -1.9 | -1.73 | -2.42 | -2.48 | -1.56 | -2.03 | -0.69 | -1.49 | 0.08 | -1.1 | 0.87 | -2.21 | -2.05 | 0.88 | -0.29 | -0.36 | 2.39 | -0.01 | -0.4 | - | 0.99 | 0.76 | 0.86 | -0.65 | 0.32 | -1.68 | 0.76 | 0.08 | 1.46 | 0.57 | |
| -1.4 | -1.49 | - | -2.11 | - | 0.61 | - | -0.7 | -0.28 | -1.86 | - | -1.42 | -0.08 | - | - | 0.34 | 1.28 | 1.04 | 2.28 | - | - | - | 0.68 | 1.57 | - | 1.04 | -0.24 | 0.42 | 1.59 | -0.06 | 0.47 | 0.76 | |
| - | - | - | - | - | - | -5.08 | - | -5.02 | - | - | - | 1.52 | -1.43 | -0.19 | 1.26 | 1.37 | - | 1.85 | - | - | - | 1.57 | 1.4 | -2.88 | 0.3 | 0.6 | -0.12 | 1.66 | 1.55 | 1.13 | 0.63 | |
| -2.5 | -1.11 | - | - | - | - | 0.48 | -1.37 | 0.43 | -0.23 | - | -1.2 | - | - | -0.64 | - | 0.13 | - | 3.09 | - | - | - | 0.22 | 0.7 | - | 1.66 | - | - | 1.6 | 2.24 | 1.03 | -0.05 | |
| -0.75 | -0.6 | -0.6 | -0.2 | -1.69 | -0.53 | -0.74 | -0.77 | -0.32 | -0.3 | -0.13 | -0.2 | -2.87 | -3.79 | -1.14 | -3.53 | 1.58 | 1.37 | 3.05 | - | - | - | -0.86 | -3.54 | -3.34 | -0.7 | -1.27 | -0.99 | 1.2 | 1.42 | -0.36 | 0.0 | |
Smo423400 (ACBP4) | -0.54 | - | -0.96 | - | - | -0.43 | - | - | - | - | - | - | - | - | 1.83 | - | 1.48 | 1.34 | 2.72 | - | - | - | 0.49 | -0.59 | - | - | 0.66 | - | 2.21 | 1.64 | -0.59 | 1.34 |
| -2.99 | -2.93 | -2.17 | -2.01 | -2.14 | -3.23 | -2.27 | -1.44 | -2.29 | -3.39 | -1.21 | -1.7 | 1.39 | -1.38 | -1.74 | 1.58 | 0.69 | 0.71 | 1.4 | - | - | - | 1.13 | 1.12 | - | -0.09 | -1.75 | -1.23 | 1.2 | 1.59 | 1.64 | 1.44 | |
| - | -1.5 | - | -1.87 | - | - | -1.5 | -1.21 | -1.74 | - | - | - | 1.67 | -0.51 | - | 1.94 | 0.61 | -1.05 | 2.53 | - | - | - | 1.72 | 1.33 | - | 0.76 | - | 0.88 | 0.55 | 0.16 | 0.55 | 0.49 | |
| -1.33 | -1.06 | -0.77 | -0.91 | -0.49 | -1.8 | -0.99 | -0.96 | -0.64 | -0.66 | -0.9 | -1.01 | 0.93 | -1.53 | -3.07 | 1.11 | 0.02 | 0.58 | 1.44 | -3.23 | 0.25 | -3.66 | 0.76 | 0.94 | 1.04 | -0.23 | -0.92 | -0.84 | 0.66 | 0.69 | 0.9 | 0.9 | |
| -3.23 | -2.88 | - | 0.07 | - | -2.67 | -1.87 | -2.13 | -1.96 | -1.98 | - | -1.22 | 0.76 | 0.16 | -1.44 | 1.46 | -0.32 | -1.14 | 2.93 | - | - | - | 1.65 | 2.42 | -0.67 | 0.33 | -1.51 | - | -0.51 | - | 0.68 | 0.35 | |
| -4.16 | -1.59 | -1.09 | - | -2.97 | -2.97 | -0.81 | - | 0.21 | -2.42 | - | -1.52 | 0.91 | -0.01 | -0.51 | 0.99 | 1.03 | - | 2.64 | - | - | - | 1.59 | 1.43 | - | -1.91 | -1.61 | -0.79 | 1.03 | 1.05 | 1.17 | 0.64 | |
| -2.15 | -3.68 | -2.91 | -2.37 | - | -3.99 | -3.79 | -1.76 | -0.39 | -3.5 | -1.58 | -3.61 | 1.55 | 0.14 | -0.43 | 1.35 | 0.57 | 0.34 | 1.13 | - | - | -4.92 | 1.16 | 1.59 | -3.68 | -0.04 | -2.38 | -2.6 | 1.19 | 0.25 | 1.61 | 2.07 | |
| - | - | -3.59 | -4.7 | -20.61 | - | -5.86 | -4.4 | -6.35 | -8.96 | -4.1 | -5.07 | -6.54 | - | - | -0.46 | -0.93 | -3.51 | 3.86 | - | - | -3.83 | -2.16 | -0.95 | 1.03 | 2.02 | -3.07 | -2.17 | 1.11 | 1.26 | 1.02 | 1.03 | |
| -3.9 | -3.67 | -4.66 | -4.0 | -4.46 | -5.08 | -7.11 | -6.01 | -5.2 | -5.65 | -3.54 | -4.45 | - | - | - | -1.33 | -0.95 | -2.92 | 3.61 | - | -2.22 | -5.03 | 0.17 | -0.03 | 0.79 | 1.04 | -2.79 | -2.14 | 1.26 | 1.73 | 1.45 | 1.73 | |
Smo49296 (TRB1) | -3.96 | -3.66 | -3.9 | -2.75 | -1.59 | -4.42 | - | -4.88 | -3.28 | -3.88 | -2.51 | -4.7 | 1.64 | -4.28 | -2.97 | 1.93 | 1.41 | 1.42 | 1.55 | - | -3.14 | - | 1.13 | 1.13 | - | -3.47 | - | - | 1.61 | 1.39 | 1.1 | 1.63 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.52 | 1.38 | 0.84 | 2.62 | - | - | - | 1.24 | 0.21 | - | - | - | - | 0.48 | 1.44 | 2.05 | 1.98 | |
| -0.45 | -1.18 | -0.99 | -1.45 | 0.24 | -2.77 | -2.45 | -2.2 | -1.91 | -2.16 | -1.46 | -0.68 | 0.54 | -1.48 | -3.76 | 1.16 | 0.42 | 0.81 | 1.49 | - | 0.47 | - | 1.27 | 1.2 | -2.81 | -3.57 | -2.76 | - | 1.62 | 1.35 | 1.39 | 1.02 | |
| -2.09 | -2.07 | -1.45 | -1.76 | -1.99 | -1.55 | -1.82 | -1.64 | -1.24 | -1.28 | -1.91 | -1.79 | 0.62 | -0.84 | -1.96 | 0.76 | 0.85 | 1.34 | 0.84 | -4.92 | 0.91 | -5.39 | 1.02 | 1.03 | 0.15 | -0.57 | -1.15 | -0.98 | 0.99 | 0.84 | 1.43 | 1.53 | |
Smo69510 (GATA23) | - | - | - | - | - | - | - | - | - | - | - | - | 1.26 | - | - | 1.65 | 1.12 | 1.61 | 1.41 | - | -4.39 | - | 1.68 | 1.66 | -1.68 | - | - | - | 1.54 | 1.62 | 1.54 | 1.58 |
| 0.14 | -0.31 | -1.69 | -1.11 | -1.23 | -1.44 | -1.88 | -0.95 | -1.66 | -1.03 | -1.11 | -0.52 | -0.05 | -0.13 | -3.06 | 1.51 | -0.04 | 0.74 | 1.81 | -1.64 | -1.17 | -3.72 | 0.41 | 0.79 | 0.39 | -0.77 | -0.76 | -1.08 | 1.23 | 0.93 | 0.91 | 0.85 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.32 | - | - | 1.24 | 1.08 | 1.63 | 1.52 | -3.28 | 0.63 | -0.89 | 1.71 | 1.31 | 0.87 | - | - | - | 1.48 | 1.57 | 0.79 | 0.85 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.3 | - | - | 0.82 | 0.97 | 2.04 | 2.68 | - | - | - | 1.52 | 0.72 | - | - | - | - | 1.72 | 1.37 | 1.54 | 1.68 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.73 | - | - | 2.24 | 0.78 | 1.78 | 2.72 | - | - | - | 1.79 | 1.88 | - | - | - | - | 1.16 | 0.87 | 0.69 | 0.12 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.57 | - | - | 1.93 | 0.98 | 1.24 | 2.0 | - | - | - | 1.64 | 1.32 | - | - | - | - | 1.31 | 1.11 | 1.74 | 1.71 | |
Smo74160 (PYM) | - | - | - | - | - | - | - | - | - | - | - | - | 1.27 | - | - | 1.66 | 1.4 | 1.76 | 1.5 | -2.2 | - | 0.2 | 1.33 | 1.39 | -1.16 | - | - | - | 1.71 | 1.37 | 1.17 | 1.34 |
| -4.58 | - | - | -4.37 | - | -5.04 | - | -3.81 | -4.18 | -3.91 | -5.26 | - | 1.71 | -0.64 | -2.22 | 1.49 | 0.42 | 0.87 | 1.09 | - | - | - | 1.25 | 1.51 | - | -0.05 | -0.17 | -0.06 | 1.0 | 0.92 | 1.67 | 2.11 | |
Smo78404 (LAC12) | -1.18 | -1.32 | -2.96 | -0.06 | -4.06 | -1.89 | 0.36 | -1.07 | -1.65 | -0.34 | 0.28 | 0.09 | -0.04 | 1.12 | -4.67 | -0.2 | -1.42 | 0.72 | 2.49 | - | - | - | 1.49 | 2.26 | -1.89 | -0.94 | -1.96 | 1.09 | -0.92 | -0.21 | -2.9 | -0.73 |
| - | - | - | - | - | - | - | - | - | - | - | - | -2.19 | - | - | -1.04 | 1.6 | 0.31 | 3.27 | - | -0.69 | - | 1.17 | 0.32 | -1.19 | - | - | - | 2.17 | 1.75 | 1.43 | 1.21 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.18 | - | - | 1.56 | 1.25 | 1.37 | 1.75 | - | - | -0.12 | 1.27 | 1.1 | -1.82 | - | - | - | 1.69 | 1.5 | 1.7 | 1.76 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 0.89 | - | - | 1.33 | 0.61 | 1.0 | 1.86 | 0.39 | 0.5 | 0.07 | 0.94 | 1.0 | 0.19 | - | - | - | 1.35 | 1.39 | 1.39 | 1.95 | |
Smo9597 (AGL15) | - | - | - | - | - | - | - | - | - | - | - | - | 0.64 | - | - | 2.09 | -1.25 | 0.47 | 2.91 | - | 0.03 | - | 0.19 | 1.14 | - | - | - | - | 1.43 | 0.82 | 1.64 | 2.3 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.