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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Aerial tissue - Light - ZT1 | Aerial tissue - Light - ZT3 | Aerial tissue - Light - ZT5 | Aerial tissue - Light - ZT7 | Aerial tissue - Light - ZT9 | Aerial tissue - Light - ZT11 | Aerial tissue - Dark - ZT1 | Aerial tissue - Dark - ZT3 | Aerial tissue - Dark - ZT5 | Aerial tissue - Dark - ZT7 | Aerial tissue - Dark - ZT9 | Aerial tissue - Dark - ZT11 | Roots | Root elongation and differentiation zone | Root meristematic zone | Aerial roots and rhizophores | Shoot tips | Microphyll | Strobili | Shoot apical meristem - AC | Shoot apical meristem - Core | Shoot apical meristem - P1 | Stem - Top | Stem - Bottom | Whole plant | Aerial tissue - Stress - Dark | Aerial tissue - Stress - High light | Aerial tissue - Stress - Cont | Aerial tissue - Stress - 37C 1h | Aerial tissue - Stress - 37C 3h | Aerial tissue - Stress - 4C 1h | Aerial tissue - Stress - 4C 3h |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.8 | -0.71 | -0.51 | -0.34 | -0.21 | 0.03 | -0.06 | 0.29 | 0.39 | 0.25 | 0.31 | -0.07 | 0.45 | 0.88 | 0.79 | 0.23 | -0.3 | 1.01 | -0.1 | -0.89 | -1.0 | 0.17 | 0.15 | 0.37 | -1.64 | 0.12 | -0.37 | -0.72 | -0.33 | -0.25 | -0.28 | -0.18 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 4.23 | 3.73 | - | - | - | - | - | - | - | - | - | - | -11.0 | - | - | - | - | - | - | |
Smo118035 (XTH5) | 0.69 | 0.77 | -1.34 | 0.25 | -2.38 | -1.58 | -0.32 | 0.09 | -2.63 | -1.36 | 0.57 | 0.08 | - | 3.39 | 2.24 | - | -1.68 | 0.31 | - | - | - | 1.48 | -1.64 | -0.61 | - | -1.52 | -1.39 | - | -2.67 | -2.68 | - | - |
Smo119243 (XTH5) | -0.41 | -0.81 | -2.24 | -1.61 | -1.26 | -3.51 | -0.44 | -1.68 | -3.08 | -0.39 | -0.83 | -2.0 | 1.21 | 3.65 | 2.32 | 0.25 | -2.05 | 1.21 | -0.6 | -3.31 | - | -3.86 | -2.41 | -0.3 | -1.8 | -2.07 | -2.92 | - | -1.56 | -1.48 | -4.97 | -4.09 |
| -4.29 | -2.97 | -5.34 | -4.74 | -3.01 | -3.64 | -3.17 | -3.11 | -3.31 | -3.18 | -3.65 | -3.88 | 0.5 | 2.95 | 1.33 | 1.73 | -4.62 | 2.06 | 0.19 | -4.99 | -2.32 | -0.81 | -3.86 | -1.49 | -3.25 | -1.54 | 0.36 | -1.87 | 0.1 | 1.37 | 0.8 | 1.0 | |
| -0.46 | -0.65 | -0.22 | 0.1 | 0.19 | -0.3 | 0.04 | -0.24 | -0.48 | -0.34 | -0.15 | -0.87 | 0.34 | 2.49 | 2.93 | -0.46 | -3.52 | 2.25 | -1.98 | -2.45 | - | -3.36 | -4.76 | -3.92 | -4.76 | -1.8 | -1.85 | -1.97 | -3.3 | -3.22 | -3.92 | -3.59 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.47 | -1.13 | -0.62 | -0.09 | 0.27 | 0.42 | 0.56 | 0.24 | 0.25 | -0.13 | -0.29 | -0.97 | 0.98 | 1.54 | 1.05 | 0.45 | -0.05 | 1.63 | -1.06 | -2.61 | -2.05 | -1.07 | 0.12 | 0.14 | -2.86 | -2.19 | -1.25 | -1.47 | -0.18 | 0.08 | -0.28 | 0.18 | |
Smo173700 (NIP6) | 0.47 | -0.02 | 0.23 | -0.01 | 0.13 | 0.23 | -0.26 | 0.06 | 0.47 | 0.49 | 0.57 | 0.13 | 0.39 | 1.11 | 0.45 | 1.04 | -0.1 | 0.94 | -1.03 | -2.41 | -0.64 | -4.4 | -0.46 | -0.62 | -0.53 | -1.54 | -1.2 | -0.73 | -0.22 | 0.09 | -0.59 | -0.3 |
| -1.14 | -0.76 | -0.93 | -0.48 | -0.73 | -0.76 | -0.6 | -0.86 | -0.42 | -0.39 | -0.61 | -0.8 | 0.34 | 1.8 | 2.58 | 0.8 | -0.11 | 1.85 | -2.05 | -3.62 | -5.2 | -0.77 | -0.59 | 0.26 | -2.92 | -4.26 | -4.07 | -3.49 | 0.06 | 0.59 | -0.02 | -0.14 | |
| -2.01 | -1.73 | -3.59 | - | -3.11 | 0.47 | -0.95 | -1.34 | -1.97 | -3.56 | -2.33 | -2.28 | 0.39 | 3.96 | -0.29 | 0.4 | - | 0.34 | -1.19 | - | - | - | - | -3.13 | - | 0.45 | 1.38 | - | -1.25 | 0.14 | 0.5 | -0.94 | |
| -2.68 | -1.49 | -3.69 | -3.64 | -2.76 | -3.05 | -3.3 | -3.4 | -2.65 | -2.84 | -2.15 | -1.97 | -3.34 | 3.35 | 2.87 | -0.56 | - | 2.57 | -1.96 | - | - | - | -6.68 | -4.17 | -2.97 | 1.88 | -0.45 | -0.14 | -6.56 | -5.58 | -6.61 | -5.66 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -0.75 | -4.16 | -2.03 | -1.38 | -1.08 | -2.77 | -0.48 | -3.46 | -2.99 | -0.25 | -1.38 | -1.16 | -3.38 | 3.07 | -0.47 | -1.23 | -0.96 | 2.38 | -0.42 | - | - | 0.64 | -2.07 | -2.92 | -0.79 | 1.24 | 1.58 | 1.52 | -1.45 | -2.65 | -3.46 | -4.53 | |
| -0.21 | -1.04 | -0.76 | 0.06 | -0.47 | -0.21 | -0.21 | -0.46 | -0.13 | -0.54 | 0.06 | -0.3 | -0.75 | 0.47 | 1.81 | -1.44 | -2.11 | 2.12 | 1.17 | 0.35 | -2.69 | -2.02 | -1.71 | -1.54 | -1.01 | -0.08 | 1.5 | 0.84 | -2.72 | -2.01 | -1.35 | -1.0 | |
| -1.67 | -1.77 | -1.38 | -0.8 | -0.08 | -0.75 | -0.32 | -0.81 | -0.94 | -0.76 | -0.6 | -1.04 | 1.13 | 2.72 | 2.81 | 1.78 | -2.76 | -7.23 | -1.85 | - | - | - | -3.79 | 0.44 | -0.68 | -1.49 | -0.44 | 0.01 | -2.68 | -0.02 | -3.05 | -2.27 | |
| -4.36 | -3.79 | -3.35 | -2.72 | -1.45 | -2.14 | -2.14 | -2.46 | -2.45 | -3.42 | -3.14 | -3.6 | 0.06 | 3.8 | 3.36 | 0.88 | -3.14 | -4.82 | -2.9 | - | - | - | -4.71 | -0.4 | -4.42 | -3.45 | -1.11 | -1.09 | -3.41 | -0.65 | -3.63 | -2.84 | |
Smo411805 (ACA7) | -2.09 | -2.09 | -1.83 | -0.88 | -1.47 | -1.75 | -1.07 | -2.27 | -1.58 | -1.34 | -1.31 | -1.17 | 1.1 | 1.97 | 2.01 | 1.65 | -0.12 | 2.03 | 0.6 | - | -4.69 | - | -3.73 | -1.26 | 1.99 | -0.62 | -2.49 | -0.94 | -0.35 | -0.6 | -1.68 | -1.25 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -5.29 | -6.42 | -6.53 | -4.16 | -1.2 | -0.7 | -0.18 | -2.72 | -3.54 | -4.08 | -6.15 | -6.63 | -3.71 | 2.89 | 2.92 | -1.46 | -2.33 | 1.0 | -0.12 | 0.2 | -0.24 | -0.66 | -2.55 | -3.62 | -1.54 | -3.32 | 1.54 | -0.73 | -0.96 | -0.49 | 0.29 | 0.85 | |
| -0.83 | -1.1 | -0.64 | -0.71 | 0.02 | -0.78 | -0.98 | -1.38 | 0.41 | -1.39 | -0.66 | -0.27 | 0.8 | 2.51 | 1.2 | 1.29 | -0.67 | -1.39 | -1.94 | -0.8 | -1.56 | - | 1.21 | 0.24 | -2.39 | -0.66 | 0.64 | 0.72 | -1.29 | -0.48 | -0.87 | -1.0 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 3.92 | - | - | - | - | - | - | - | - | 4.08 | - | - | - | - | - | - | - | - | - | |
| -0.21 | -0.5 | 0.92 | -0.56 | 0.32 | -1.28 | -3.94 | -1.55 | -1.67 | -1.09 | -0.89 | -1.18 | -5.49 | 2.78 | 2.52 | -0.58 | -2.13 | -3.06 | -1.92 | -1.36 | - | 2.05 | -2.13 | -1.94 | -0.35 | -2.35 | -0.68 | -0.88 | -1.45 | -0.64 | -1.44 | 0.64 | |
| - | - | - | - | - | - | - | - | - | - | - | - | 3.21 | 2.94 | - | - | - | - | - | - | - | - | - | 1.26 | - | - | 2.77 | - | 0.22 | 0.3 | 0.27 | 1.2 | |
| 1.11 | -0.2 | - | - | - | 0.09 | - | - | - | - | - | - | - | 3.25 | 0.9 | 0.08 | - | 0.58 | -0.25 | - | - | - | -0.09 | - | - | - | - | 3.25 | -0.2 | 0.82 | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | -0.79 | 2.78 | 3.12 | - | -4.5 | - | 0.39 | - | - | 1.99 | -0.37 | -0.1 | 1.35 | 1.05 | 0.92 | - | 0.14 | -0.07 | -2.16 | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -20.11 | -31.95 | -7.65 | - | -1.17 | -1.18 | -3.55 | -3.86 | -4.69 | - | - | -5.97 | 1.33 | -0.61 | 2.82 | 0.98 | -6.63 | 2.86 | 1.72 | - | - | - | -4.85 | -1.48 | -3.69 | 2.69 | -1.05 | -2.93 | -1.87 | -2.94 | -3.09 | -3.46 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.7 | -2.01 | -2.39 | -0.85 | -0.09 | -0.79 | -1.28 | -1.21 | -1.43 | -1.29 | -0.77 | -1.33 | -0.08 | 2.05 | 2.17 | 0.72 | 0.59 | 2.74 | -1.83 | - | - | - | -4.3 | -0.64 | -1.91 | -1.63 | -1.24 | -0.21 | -0.0 | 0.84 | -0.67 | -0.21 | |
| 0.02 | 0.11 | 0.02 | 0.26 | -0.02 | 0.13 | 0.26 | 0.0 | -0.25 | -0.28 | -0.48 | -0.31 | 0.08 | 0.6 | 1.03 | 0.93 | 0.17 | 1.49 | -0.11 | -0.43 | -1.27 | -0.49 | -0.56 | -0.2 | -2.93 | -0.46 | -0.46 | -0.74 | -0.28 | 0.12 | -0.45 | -0.76 | |
| -1.08 | -0.82 | 0.16 | -0.62 | -0.42 | -0.28 | -0.33 | -0.38 | -0.04 | 0.13 | -0.44 | -0.46 | -0.26 | 1.16 | 2.15 | 0.85 | 0.09 | 0.6 | 0.1 | -6.52 | -2.21 | 0.16 | -0.77 | -0.76 | -2.06 | -1.86 | -1.05 | -0.4 | 0.31 | 0.57 | 0.27 | 0.43 | |
| -0.08 | 0.07 | -0.23 | -0.06 | 0.39 | 0.2 | 0.18 | 0.19 | 0.27 | 0.02 | 0.23 | -0.01 | 0.25 | 0.75 | 0.42 | 0.03 | -0.37 | 0.91 | -0.05 | -1.56 | -2.41 | 0.94 | -0.02 | -0.13 | -4.69 | -0.46 | 0.09 | -0.18 | -0.5 | -0.56 | -0.33 | -0.01 | |
| 0.38 | 0.58 | 0.22 | 0.17 | -0.02 | -0.01 | 0.22 | -0.47 | -0.04 | -0.02 | -0.13 | 0.11 | 0.04 | 1.48 | 2.1 | -0.64 | 0.13 | 0.61 | -0.95 | -5.95 | -6.55 | -4.57 | -0.38 | 0.01 | -6.39 | -2.15 | -1.33 | -0.81 | 0.09 | 0.49 | -0.3 | -0.2 | |
| -0.99 | -0.25 | 0.27 | -6.5 | 0.61 | 0.41 | -0.69 | -0.59 | 0.65 | -1.04 | 0.64 | -3.71 | 0.37 | 1.49 | 1.98 | -0.3 | 0.54 | 1.69 | -1.73 | 0.01 | -1.69 | 0.79 | -0.01 | 0.38 | -0.26 | -4.03 | -1.83 | -22.23 | -2.35 | -2.51 | -2.13 | -0.61 | |
| -1.18 | -1.01 | -1.14 | -0.72 | -1.26 | -0.94 | -0.75 | -1.17 | -0.99 | -1.05 | -1.24 | -1.23 | -3.85 | 2.18 | 2.98 | -2.38 | -0.72 | 2.71 | -1.32 | -5.38 | -7.04 | -3.58 | -1.11 | -0.38 | -3.94 | -1.75 | -1.16 | -1.53 | 0.07 | 0.21 | -0.53 | -0.94 | |
Smo84864 (MSL6) | -1.4 | -1.0 | -1.3 | -0.98 | -0.28 | -0.8 | -1.05 | -1.69 | -1.0 | -1.46 | -0.57 | -1.19 | -0.15 | 2.21 | 2.83 | 0.68 | -1.85 | -1.01 | -0.64 | - | - | - | 0.39 | 1.33 | -2.52 | -1.09 | 0.6 | -1.23 | -1.12 | -0.45 | 0.17 | 0.72 |
| -0.6 | -0.5 | -0.65 | -0.7 | -0.59 | -0.4 | -0.59 | -0.53 | -0.25 | -0.14 | -0.16 | -0.28 | 0.35 | 0.86 | 1.09 | 0.13 | -0.11 | 0.8 | 0.06 | -0.72 | -1.0 | 0.6 | 0.08 | 0.21 | -2.02 | 0.31 | 0.3 | 0.22 | 0.01 | -0.04 | -0.01 | 0.51 | |
Smo90525 (SAD1) | -0.5 | -0.89 | -0.62 | -0.55 | -1.11 | -0.58 | -0.45 | -0.74 | -0.56 | -0.8 | -0.42 | -0.63 | -0.27 | 0.25 | 1.17 | -0.14 | -0.36 | 0.92 | 0.16 | 0.42 | -0.51 | 0.72 | -0.04 | 0.19 | -2.29 | 1.02 | 0.84 | 0.69 | -0.06 | 0.0 | -0.14 | 0.05 |
Smo97913 (XTH5) | -1.0 | -0.87 | -0.34 | -0.38 | -0.78 | -0.66 | -0.55 | -1.24 | -0.66 | -0.79 | -0.63 | -0.93 | -1.17 | 2.53 | 3.24 | -0.75 | -3.09 | -2.96 | -0.66 | 1.21 | -3.4 | -0.2 | -3.64 | -0.8 | -4.2 | -1.15 | 0.59 | -1.63 | -2.77 | -0.67 | -1.82 | -1.92 |
Smo98543 (XTH5) | -0.73 | -0.74 | -4.2 | -2.33 | -1.31 | -1.68 | -0.04 | -0.48 | -1.11 | -2.58 | -0.83 | -1.77 | -0.72 | 3.47 | 1.8 | -0.24 | -0.44 | 1.58 | 1.11 | -3.0 | - | 0.93 | -1.93 | -0.18 | -3.52 | -3.42 | - | -2.13 | -1.33 | -0.59 | -3.23 | -4.73 |
Smo98674 (XTH5) | -0.14 | 0.07 | -0.49 | -0.79 | -1.9 | -0.57 | -0.01 | -0.75 | -0.47 | -0.75 | 0.13 | -0.83 | -0.18 | 2.76 | 2.33 | 0.16 | 0.34 | 0.0 | -0.23 | -2.14 | -1.59 | 1.2 | -2.5 | -0.66 | -1.99 | -0.37 | -1.85 | -1.35 | -1.78 | -1.29 | -2.74 | -3.14 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.