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Heatmap: Cluster_69 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
692.34 635.31 868.73 1243.51 1329.68 1292.77 1271.99 1457.1 1279.35 1209.29 979.72 778.85 184.98 214.07 12.49 156.93 774.36 59.97 1066.99 61.77 272.54 12.35 788.65 794.54 690.12 3204.11 1007.74 661.14 909.09 830.94 654.74 604.68
851.53 795.85 1088.32 1486.71 1521.29 1372.1 1507.35 1757.27 1540.82 1539.63 1265.65 1106.06 285.75 246.31 12.67 272.22 862.77 847.77 1332.14 59.26 286.92 6.72 877.52 843.72 724.5 4066.72 1192.42 885.37 998.85 909.31 700.95 616.97
20.72 19.54 16.89 14.33 17.33 17.54 18.3 15.39 13.41 19.29 19.95 18.3 6.91 8.97 14.29 7.56 7.52 4.58 9.13 2.1 0.15 9.2 6.6 6.49 4.26 47.42 28.69 34.5 8.82 8.45 3.83 4.52
45.44 48.91 43.43 51.49 55.46 47.75 51.3 51.06 49.8 48.64 51.45 49.75 12.06 16.61 29.89 19.87 34.27 26.28 27.75 11.28 19.01 21.08 20.65 16.02 46.87 64.02 74.48 76.29 30.7 32.92 25.13 18.29
Smo150191 (RDR1)
 16.33 14.58 14.81 20.27 26.27 26.32 19.34 28.69 18.14 23.0 17.39 16.46 9.21 7.06 1.04 9.63 3.55 2.42 9.69 1.12 4.97 1.06 8.72 8.91 7.44 53.97 64.05 49.56 3.95 3.53 5.84 8.12
71.82 71.43 72.68 67.16 70.84 68.85 67.27 73.35 67.14 76.23 75.04 65.28 48.02 43.43 50.74 54.62 34.99 22.37 50.94 28.47 41.37 50.17 38.96 39.98 42.51 120.78 102.61 105.64 46.44 47.82 28.74 28.79
Smo230764 (ATARD2)
 289.58 263.08 307.67 310.1 397.49 251.25 217.17 261.59 293.17 627.4 359.72 386.8 193.37 3.62 8.62 24.37 12.87 10.3 100.56 2.17 10.08 18.51 36.36 33.41 195.44 993.29 516.12 967.31 9.21 10.13 6.85 7.21
18.36 18.18 12.68 18.59 24.02 19.73 14.73 19.97 17.92 23.99 19.74 17.42 3.93 5.33 7.74 4.64 3.25 0.95 4.24 0.69 0.0 0.0 3.85 4.44 2.96 44.93 29.96 32.99 3.57 3.69 2.14 2.45
6.39 4.4 5.82 5.93 5.56 4.97 6.25 6.6 4.35 6.06 7.52 4.41 0.96 4.22 6.33 0.75 0.42 0.41 0.57 0.0 0.94 0.0 0.6 0.47 0.81 14.0 13.73 21.72 0.23 0.4 0.29 0.37
16.51 16.13 14.4 18.5 19.52 18.49 13.75 15.88 19.22 18.07 16.94 18.8 0.38 3.3 1.53 0.39 0.48 5.93 0.86 0.0 0.3 0.0 0.48 0.74 0.25 33.32 44.45 37.85 0.4 0.18 0.4 0.22
Smo403932 (CR4)
 0.48 0.62 0.69 0.64 0.49 0.85 0.83 1.25 0.84 1.04 0.99 0.85 0.02 0.01 0.04 0.02 0.31 0.06 0.58 0.0 0.0 0.0 0.72 0.3 0.16 2.88 0.45 0.81 0.36 0.5 0.22 0.18
Smo405957 (EST4)
 1.16 0.71 1.29 0.96 1.31 1.06 0.88 1.36 1.12 1.79 1.17 1.26 0.03 1.12 0.59 0.01 0.02 0.0 0.23 0.0 0.0 0.0 0.0 0.01 0.13 2.1 1.71 1.72 0.0 0.0 0.0 0.0
31.41 26.05 28.49 28.53 30.43 24.59 22.35 28.01 29.66 31.73 32.26 33.68 27.82 13.06 7.57 21.08 10.41 11.19 13.2 1.89 12.82 12.91 14.68 16.63 11.3 42.99 36.68 30.66 11.1 10.71 12.35 16.74
Smo407845 (DEF2)
 2.19 1.8 1.84 1.4 2.3 1.32 1.72 2.02 2.13 2.34 2.88 1.87 0.13 0.53 0.2 0.47 0.33 0.44 0.75 0.0 0.11 0.0 0.07 0.04 0.34 2.14 4.06 3.71 0.26 0.24 0.2 0.19
4.01 2.76 1.6 2.6 1.69 2.38 2.12 3.02 3.39 3.53 4.27 3.66 0.36 2.28 0.52 1.6 0.39 0.25 1.41 0.0 0.71 0.0 0.33 0.44 1.51 12.1 8.84 7.25 0.62 0.7 0.63 0.79
4.53 4.32 4.81 4.68 5.56 5.07 4.4 4.86 4.8 4.85 5.52 4.71 3.13 2.02 1.16 1.96 0.6 1.16 0.78 0.76 0.73 0.0 1.4 1.53 2.45 9.0 6.63 4.77 0.55 0.73 0.76 0.91
4.2 5.2 5.34 4.83 4.44 5.34 5.32 6.58 6.28 5.78 6.43 6.56 0.56 3.01 3.54 0.94 0.58 1.92 1.26 0.15 2.07 0.0 0.7 1.57 4.17 11.67 8.07 6.2 0.73 0.81 0.31 0.84
2.6 3.01 3.85 2.72 3.04 3.15 3.26 3.49 2.82 2.99 3.07 2.76 0.11 2.05 2.38 0.04 0.07 0.1 0.2 0.97 0.76 1.54 0.09 0.22 0.82 4.47 6.43 5.35 0.08 0.05 0.07 0.03
Smo415080 (HUA2)
 23.69 27.66 19.34 25.48 20.86 25.69 22.58 20.54 20.57 24.19 15.43 22.06 11.11 8.08 11.15 12.31 10.0 12.1 17.1 19.47 0.28 7.35 11.72 10.32 2.4 32.34 42.84 38.75 10.3 10.47 10.87 10.82
1.9 2.19 3.83 3.91 5.97 2.54 2.95 5.69 6.3 6.25 4.77 4.83 0.62 0.46 0.17 0.3 1.54 1.21 1.65 0.0 0.0 0.0 1.14 0.87 0.82 15.42 4.83 2.52 2.51 1.62 3.55 3.05
30.5 28.26 30.52 31.05 32.7 31.23 34.84 31.32 29.89 31.51 28.54 27.74 22.05 16.18 22.87 21.07 16.01 13.04 24.27 4.77 10.25 18.88 18.17 16.19 15.78 57.53 63.18 64.78 16.62 19.28 17.74 17.49
15.67 15.27 19.45 20.38 17.87 14.13 12.54 12.92 13.62 16.2 17.53 15.77 11.73 10.37 5.73 10.56 5.67 3.76 6.82 0.25 4.37 0.7 7.07 7.05 3.64 22.16 18.93 17.25 3.52 4.77 5.15 7.97
98.46 75.16 58.93 76.68 84.78 67.25 70.57 101.25 103.55 95.76 107.54 111.21 18.77 44.3 42.55 24.53 8.0 2.06 12.61 9.95 26.28 29.15 11.77 14.84 72.59 207.42 201.15 191.32 9.32 10.5 11.13 10.19
141.63 104.94 74.3 100.22 95.1 88.68 92.56 128.47 127.35 124.25 137.45 154.58 33.12 52.82 47.74 32.97 34.42 25.52 25.91 11.24 42.81 18.02 35.32 33.54 86.99 276.41 329.73 290.32 29.56 30.61 35.29 26.62
3.8 3.6 2.25 2.85 2.97 4.19 2.04 4.02 2.79 2.8 3.19 3.16 0.37 1.98 1.35 0.36 0.18 0.0 0.33 0.34 0.4 1.07 0.31 0.16 2.59 8.54 9.14 7.13 0.3 0.19 0.27 0.08
15.22 16.08 12.9 17.38 21.97 18.1 17.77 24.4 22.58 18.9 18.49 16.88 10.06 8.53 7.92 11.65 9.93 1.03 8.53 4.41 1.95 14.63 12.56 12.79 10.45 54.6 58.75 42.83 10.37 9.41 11.2 11.29
Smo429326 (hda14)
 8.93 5.76 5.71 9.67 9.97 10.95 9.19 13.78 11.71 10.51 10.2 9.77 0.03 2.46 1.61 0.14 0.22 0.13 0.18 1.24 0.39 0.0 0.13 0.27 2.22 24.02 15.28 17.25 0.08 0.33 0.15 0.05
145.26 111.14 89.17 116.07 100.44 96.78 100.6 143.32 129.21 139.9 143.67 162.18 36.79 62.34 58.04 45.23 38.03 10.68 36.49 22.49 45.4 30.25 39.68 40.75 143.19 317.91 341.12 304.91 31.08 34.24 36.61 29.14
51.24 38.37 28.91 39.82 39.65 35.87 38.8 51.71 58.56 51.91 53.44 60.85 14.64 20.55 15.05 14.78 11.9 1.16 11.47 1.59 11.21 9.89 11.64 12.66 48.3 115.87 102.09 99.7 11.72 13.25 9.6 4.16
12.77 14.68 15.17 13.84 17.51 20.43 20.23 21.77 16.46 17.83 14.5 13.38 10.9 8.67 7.15 12.55 6.59 7.97 17.87 5.38 1.97 0.66 7.7 8.03 9.42 27.83 44.9 33.57 7.92 8.3 10.8 18.52
114.5 119.9 128.41 122.42 135.71 125.59 150.6 130.28 127.36 130.4 140.4 118.54 58.86 51.74 117.2 69.8 69.99 59.01 81.19 89.17 30.27 52.55 51.25 49.63 57.89 270.4 283.63 310.32 65.53 66.03 56.29 54.01
41.82 36.76 30.95 34.4 40.1 37.69 32.13 33.0 33.73 38.87 31.32 32.46 29.61 19.02 29.94 31.22 17.53 19.26 33.93 17.34 11.09 23.06 19.72 21.24 16.08 50.86 50.54 46.35 20.74 20.73 13.68 13.44
41.15 43.14 43.64 44.64 46.12 45.74 40.45 41.09 38.88 38.46 39.59 35.84 30.59 35.28 52.68 37.9 29.27 25.56 38.38 22.63 19.91 41.95 31.51 31.29 21.82 53.21 68.42 64.46 24.7 24.88 26.45 29.36
Smo440203 (CHR11)
 104.77 95.18 96.04 109.6 111.07 100.49 115.47 130.21 131.61 138.94 135.56 122.21 60.92 72.31 92.29 62.04 49.32 31.62 56.62 41.19 18.0 36.72 56.56 55.51 48.85 214.71 220.39 228.36 56.0 56.05 62.8 71.61
22.76 18.34 17.78 17.29 18.38 18.95 18.16 20.97 20.77 22.11 21.63 22.45 15.18 12.92 12.58 18.55 10.18 4.68 18.52 8.28 8.26 10.44 12.85 14.71 16.2 42.59 35.33 35.64 11.46 11.79 11.29 12.19
Smo441720 (PDR12)
 4.72 3.3 3.1 2.79 1.91 3.28 2.81 3.96 3.24 4.42 4.44 4.45 0.58 4.28 2.47 0.65 0.46 0.8 1.33 0.15 0.56 1.43 0.48 0.33 1.38 5.71 5.43 3.99 0.5 0.36 0.81 0.62
1.25 1.53 1.63 1.38 1.36 1.46 1.54 1.43 1.52 1.89 1.83 1.51 0.48 0.9 1.03 0.74 0.76 0.87 1.64 0.01 0.32 0.05 0.64 0.65 0.65 3.2 3.39 2.84 0.65 0.79 0.75 1.34
9.77 7.76 10.46 9.95 11.71 8.02 7.24 7.1 11.97 7.58 10.91 8.51 3.84 4.84 5.11 5.24 2.64 2.14 6.77 0.0 3.76 2.08 3.24 2.54 5.98 28.04 18.1 17.16 3.0 2.91 3.14 2.54
3.96 3.13 7.48 8.67 10.67 6.48 8.13 11.84 8.99 9.3 8.18 5.74 0.0 0.0 0.0 0.39 0.42 0.05 3.28 0.0 0.0 0.0 1.48 1.23 4.31 27.04 8.23 13.48 0.79 1.56 0.18 0.08
6.35 6.14 13.39 11.63 11.46 11.64 8.4 16.7 13.1 10.19 8.92 8.16 0.0 0.0 0.0 0.46 0.36 0.02 2.85 0.0 0.0 0.0 0.81 1.04 0.91 23.3 6.23 18.59 0.47 0.98 0.23 0.05
13.07 16.05 29.32 28.82 31.04 26.91 24.66 35.22 29.29 28.52 26.05 22.27 0.08 0.0 0.0 0.91 0.38 0.0 3.91 0.0 0.0 0.0 0.32 2.21 2.17 46.75 25.51 43.64 1.09 2.51 0.52 0.23
15.68 11.19 16.31 14.99 20.4 12.55 12.02 12.37 19.21 26.38 20.54 19.36 2.39 1.48 5.38 1.99 0.8 0.0 1.61 0.19 3.33 18.03 1.05 1.55 9.19 82.95 43.39 64.77 0.8 0.82 0.35 0.17
6.68 7.03 5.96 7.13 5.94 6.91 7.55 7.75 7.93 8.37 7.77 7.43 1.31 3.91 5.47 1.44 2.48 4.09 1.55 0.05 0.18 0.0 1.79 1.3 3.18 17.02 21.59 16.54 2.88 2.15 2.52 2.49

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)