Heatmap: Cluster_99 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo34488	-1.15	-1.48	-0.49	-0.91	-0.75	-0.45	-0.06	-0.17	-0.28	-0.4	-0.8	-0.81	-1.97	-2.44	-0.33	-1.61	-1.56	-1.71	-1.27	-3.87	3.61	0.75	-1.19	-1.57	1.11	-1.72	-0.1	0.21	-0.86	-0.82	-1.1	-0.94
Smo404054	-1.89	-	-	-	-	-0.33	-	-	-	-	0.31	-	-	-	-	-	-	0.3	-	-	4.83	-	-	-	-	-	-	-	-	-	-	-
Smo404569	-11.5	-15.03	-	-12.39	-14.85	-12.38	-11.5	-12.75	-8.31	-11.97	-11.55	-16.07	-5.9	-17.63	-14.47	-5.54	-6.0	-6.58	-	-9.03	4.99	-9.29	-7.12	-8.4	-8.03	-15.42	-14.6	-11.39	-10.06	-6.48	-5.12	-
Smo404684 (PAP9)	-5.37	-	-	-4.37	-	-4.62	-	-4.33	-	-	-2.81	-29.12	-5.38	-	-	-4.93	-	-0.36	-5.41	-	4.93	-	-4.27	-	-2.59	-	-	-	-4.46	-29.21	-	-
Smo405141	-	-	-2.95	-	-	-	-	-	-	-	-	-	-2.37	-	-3.25	-0.71	-	-0.84	-2.49	-	4.86	-	-0.84	-2.57	-	-	-	-	-2.49	-1.49	-	-
Smo407021	-	-	-	-	-	-	-	-	-	-	-	-	-	-1.25	-	-	-	1.02	-1.18	-0.01	4.81	-	-	-	-	-	-	-	-	-	-	-
Smo407502	-	-	-	-2.17	-	-3.97	-1.59	-1.2	-2.3	-0.78	-3.38	-	-	-	-	-	-	-0.97	-2.14	-	4.77	-	-2.53	-1.32	0.27	-	-	-	-3.3	-2.13	-	-
Smo409010	-	-	-	-4.09	-	-	-	-	-1.03	-	-	-	-	-	-	-	-	-	-2.98	-	4.97	-	-	-	-	-	-	-	-	-	-	-
Smo409548	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo409620	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-1.37	4.98	-	-	-	-	-	-	-	-	-	-	-
Smo411713 (GPT)	-	-	-	-	-	-	-	-	-	-	-	-	-4.69	-2.53	-4.35	-	-	-	-4.81	-	4.97	-	-3.74	-	-	-	-2.66	-	-4.71	-3.73	-3.08	-
Smo411777	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo412216	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo412779 (RPA70B)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo414136	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo418242	-1.32	-1.1	-1.47	-2.3	-2.59	-0.86	-0.34	-1.42	-1.42	-1.93	-0.59	-0.69	-3.41	-2.15	-0.74	-2.35	-2.51	-2.93	-0.11	-0.91	4.33	-	-	-3.49	0.3	-0.61	-2.23	-1.41	-0.75	-2.58	-2.04	-2.1
Smo419700	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.8	-	-	-	-	0.92	-	-	-	-	0.66	-0.4
Smo419813	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo420116	-3.04	-2.17	-	-	-	-	-	-	-	-4.08	-	-3.76	-	-	-4.4	-	-3.63	-1.98	-1.63	-	4.91	-	-2.68	-	-0.62	-	-	-	-	-	-	-
Smo420947	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo421833	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo421957	-1.51	-1.02	-0.87	-0.98	-2.07	-1.45	-1.34	-1.23	-1.13	-0.63	-1.44	-1.28	-3.05	-1.83	-1.28	-2.76	-1.52	-1.19	0.04	-3.21	4.07	0.8	-1.51	-3.07	0.37	-1.08	-0.33	-0.19	-1.13	-1.53	-1.8	-1.37
Smo424001	-	-1.99	-2.87	-3.44	0.05	-1.99	-3.2	-	-1.32	-	-2.49	-	-3.27	-0.96	-0.67	-	-2.14	-1.33	-0.45	-	4.57	-	-3.43	-	-	-1.15	-1.04	1.07	-	-	-	-
Smo425544	-	-	-	-	-	-	-	-	-	-	-	-	-	-1.66	-	-	-	-	-1.78	-	4.97	-	-	-	-	-	-	-	-	-	-	-
Smo425547	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo425831 (SBT5.4)	-5.57	-0.95	-0.37	-2.04	-	-3.92	-2.6	-4.26	-2.5	-1.99	-1.96	-4.22	-0.04	0.82	-4.74	0.11	-	-0.7	-1.12	-	4.49	-	-	-4.03	-1.07	-2.9	-1.82	-0.35	-3.13	-2.98	-	-
Smo427426	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-
Smo427962 (PAP9)	-5.41	-	-	-4.41	-	-4.65	-	-4.36	-	-	-2.85	-29.15	-5.41	-4.65	-4.79	-4.97	-	-0.4	-5.45	-	4.9	-	-4.3	-	-2.62	-2.78	-0.88	-	-4.5	-29.25	-	-
Smo431545 (PAP27)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-1.17	-0.36	4.9	-	-	-	-	-	-	-0.18	-	-	-	-
Smo432277 (PAP9)	-5.41	-	-	-4.41	-	-4.65	-	-4.36	-	-	-2.85	-29.15	-5.41	-4.65	-4.79	-4.97	-	-0.4	-5.45	-	4.9	-	-4.3	-	-2.62	-2.78	-0.88	-	-4.5	-29.25	-	-
Smo432333	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.99	-	-	-	-	-	-	-	-1.89	-	-	-
Smo82984	-3.23	-	-	-	-0.94	-2.77	-4.12	-	-3.13	-4.38	-	-4.14	-3.12	-3.43	-0.6	-2.45	-3.19	-1.55	-4.25	-0.23	4.42	0.83	-2.58	-1.91	1.91	-	-	-1.43	-2.24	-1.39	-1.91	-
Smo94452 (TOZ)	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	5.0	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.