Heatmap: Cluster_261 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d001904 (GRMZM2G702888)
-3.41 -2.62 0.99 - -0.81 -0.95 -1.42 1.66 -0.1 -0.68 2.06 -0.01 -0.45 - 1.03 -1.05 -0.77 -0.02 -0.69 -1.56 0.06 -0.5 -1.18 -1.63 1.4 -0.02 2.04 -0.61 - - 0.52 - -0.35 -0.26 -0.37 0.65 0.41
- - - - 0.0 - - - - - 3.87 -1.66 - - -6.3 1.79 - - -1.05 -5.83 -0.14 - - -2.98 - 3.31 - 1.0 - - 1.25 - 0.76 - -6.37 - -
- - - - -4.18 -1.07 - - - - 4.8 -2.37 - - - -4.61 2.51 - -1.26 -2.79 - - - - -0.46 - - - - - - - -1.04 - - -0.09 -
- - 1.57 - 0.39 0.81 - - - - 4.12 -0.23 - - - 1.1 1.57 - - - 0.34 - - - - - 1.1 0.55 - - 0.86 - - - -2.1 -1.34 -1.54
Zm00001d004046 (GRMZM2G126856)
- - - - 0.32 1.92 0.16 - - - 3.1 -1.65 - - -5.19 0.37 1.74 0.13 -3.26 -2.39 -0.32 - - - - - - - - - - - - -2.94 0.46 0.86 3.56
- - -0.27 - -1.59 1.8 -2.29 -3.24 - -6.63 1.67 0.81 - 0.58 -7.65 0.66 -3.11 -3.9 0.4 -3.29 0.71 -0.1 -1.65 -7.59 -5.41 -3.09 0.19 -0.12 - 3.21 0.4 - -1.97 -8.05 -6.03 0.37 2.37
- - - - -3.22 - - - - - 4.9 -4.82 - - - 0.97 0.91 - - -1.52 - - - - - - - - - - 0.34 - - - - 0.56 -
- - - - - - - - - - 4.92 -1.79 - - - -0.28 - - 2.49 - - - - - - - - - - - - - - - - - -
Zm00001d008465 (GRMZM2G113378)
-5.74 - -1.12 - 0.76 -0.87 -4.2 - -3.34 - 3.7 1.47 - - -0.79 -1.33 - - -3.66 - - - 2.83 - 0.67 - 1.0 -0.56 - - - - 0.4 0.09 -0.26 -0.09 0.77
-2.51 -1.29 1.76 -2.08 0.66 0.01 -3.86 -0.36 -3.25 -2.87 3.37 0.06 -1.93 -4.95 -2.67 -0.85 -2.05 -1.56 -0.93 -5.61 -2.44 -1.15 -0.74 -0.4 1.76 -1.12 0.66 -1.48 - 0.36 -0.77 -2.09 -0.39 -1.04 -0.88 -0.28 1.63
Zm00001d008479 (GRMZM5G825193)
-4.55 -2.51 1.97 -0.98 1.06 -1.5 -2.16 -0.31 -4.95 -3.98 3.46 0.19 -2.48 -2.82 -2.45 -0.89 -2.36 -3.04 -2.2 -5.78 - -4.11 -0.59 -1.79 1.81 -1.04 1.77 -2.8 - -1.03 -5.0 -0.79 -0.35 -2.96 -2.84 0.1 1.72
Zm00001d009338 (GRMZM2G395850)
- -2.19 -2.38 1.09 -0.61 -1.33 -2.66 - - - 3.6 -0.24 - -1.27 - -0.41 0.83 0.79 0.62 -1.28 - - - 1.06 0.05 -0.45 -1.04 -0.15 - 0.95 1.13 - -0.14 -2.45 -0.75 1.22 -1.68
- - 0.52 - 2.04 - - 0.98 1.68 -0.47 2.04 -0.14 - 1.94 -0.0 -1.42 - 1.26 -0.26 -0.27 - - - - -1.43 - - 0.44 - - 2.57 - - 0.6 -0.33 0.39 -
- - -0.97 - 0.93 1.34 2.97 0.61 - - 1.49 0.75 - - -7.64 1.21 - - -0.04 -1.07 - -1.74 -0.22 - -3.31 - 0.57 -2.31 - - -2.0 - -2.28 - 3.01 -7.5 1.57
Zm00001d010568 (GRMZM2G402806)
- - 1.3 - -0.94 -3.16 -0.95 - - - 3.88 -1.25 - 0.11 -3.72 1.18 0.5 - -1.41 -3.21 0.16 -0.2 - - 1.26 - 1.96 -0.19 - 1.15 - - -2.83 -3.2 - -0.75 -0.48
Zm00001d011540 (GRMZM2G420935)
- - - - -0.71 -2.15 -1.89 -1.96 -3.33 -0.5 0.23 -0.94 - 0.97 -0.22 -1.13 -0.19 1.46 -0.32 -0.3 -0.45 - -0.59 -3.1 - - -2.58 1.26 2.03 2.7 -4.27 2.65 -1.47 0.57 - -1.0 0.35
Zm00001d013602 (GRMZM2G422581)
-0.29 1.49 -0.03 - -1.02 - - - -0.18 - 4.54 -4.3 - - 0.25 -0.15 - - -1.55 -3.68 -1.98 - - -2.02 - - 0.93 -1.59 - - - - -3.65 - - 1.3 -
Zm00001d015133 (GRMZM2G168747)
-1.66 -1.71 -1.66 -2.49 1.48 -1.28 -2.94 -4.79 -6.77 - 4.03 -3.24 -3.56 -5.54 -3.44 0.84 -4.2 -1.83 -3.76 -7.45 -5.06 -3.34 - -5.21 0.09 -0.19 0.63 -1.8 -0.15 -3.33 0.82 -2.74 -5.46 -2.22 -1.64 0.36 2.32
- - -2.24 1.55 0.66 0.15 - -1.41 - - 3.08 -0.34 - 2.59 -7.64 0.37 0.06 - -1.61 -0.63 -1.42 -0.81 - -3.69 -4.05 - -0.19 0.13 - 2.33 -3.22 - -2.23 - -1.77 -0.61 1.52
-3.83 -1.72 -1.29 - -1.49 - -2.55 - - -2.91 3.34 -1.41 - -1.12 -2.47 -0.23 -0.38 -0.33 0.37 -3.26 -1.2 -0.92 -0.6 1.27 -2.56 1.51 - 0.58 2.72 - 0.55 - 0.03 0.93 -5.09 -0.68 -1.33
Zm00001d018784 (GRMZM2G467977)
- - - - - - - - 2.56 - 4.1 -1.53 - - -2.61 -3.7 - 1.07 - - - - - - - - 2.74 - - - - - - - - 2.19 -
Zm00001d020673 (GRMZM2G154752)
-7.93 - -3.4 -2.27 -0.88 2.13 2.15 2.1 -1.39 -2.12 2.52 0.76 - -6.14 -1.49 -2.28 -4.72 1.67 -3.43 1.35 -1.31 -2.83 0.52 -2.72 -0.31 - -0.49 -3.33 -1.78 - -0.4 -4.76 -4.28 -2.32 -5.36 0.43 1.08
- - -0.45 - 0.64 - - - - - 4.01 -0.63 - - - -1.66 2.35 - 2.26 - - - - - - - 0.76 - - - 0.2 - -2.82 - - -0.14 1.93
- - - 2.01 -0.26 1.39 - -3.72 - - 3.53 0.41 - - -1.86 0.67 -1.67 - 1.42 0.54 -0.82 - - - -0.11 -2.82 - 0.36 - - - - -2.36 - -3.23 -0.24 2.63
- -1.13 - - -1.3 - -0.45 - - - 3.97 1.09 - -0.53 -1.8 1.12 -1.73 - 1.5 2.71 -0.06 - - -0.23 -1.74 - - - - - - - - - -1.91 -0.69 0.88
Zm00001d026070 (GRMZM2G018018)
- - -4.63 0.01 -0.49 2.22 0.78 0.45 -6.47 - 3.44 1.15 -5.17 -2.65 -4.81 -2.39 -2.81 -3.61 -4.15 -6.76 -5.76 -5.54 1.32 - 2.04 0.08 -1.45 -2.53 - -1.91 -6.48 - -5.39 -7.53 -0.47 0.45 1.62
Zm00001d028116 (GRMZM2G312226)
- -5.73 - -2.82 -5.5 -0.75 4.36 -6.36 - - 2.98 2.08 -1.56 -2.43 -1.47 -3.13 -5.91 -3.45 -1.74 - -1.41 -3.92 -0.48 -3.96 -2.04 - - -5.63 - -1.23 - -2.82 - -6.67 -7.62 -5.92 -3.84
-6.75 -3.16 -3.81 -3.67 -2.89 3.0 2.93 -1.69 -0.14 0.07 2.67 0.81 -3.9 -1.59 -0.65 -1.82 -2.1 -4.33 -2.72 -8.35 -2.27 -2.8 -1.94 -1.76 -1.47 -4.48 -2.9 -3.78 - -3.74 -2.22 -5.32 -3.81 -4.24 -0.07 1.8 1.28
Zm00001d029288 (GRMZM2G026322)
-3.64 -2.65 -0.48 - 1.78 1.09 -0.19 - -3.73 -2.81 1.39 0.71 -4.67 1.11 0.3 0.97 -7.12 -1.26 -2.6 -4.86 -4.66 -2.08 -2.23 -5.42 0.29 - 1.52 0.13 - - - 1.6 -1.14 -0.82 1.65 0.16 2.36
Zm00001d029289 (GRMZM2G459563)
- - -1.4 - 0.44 -1.68 -2.01 - 0.36 0.8 3.13 1.42 - 0.7 0.25 0.35 -5.81 -2.8 -2.63 -10.3 -6.22 -1.75 0.63 - -0.69 - 1.56 -0.92 -2.13 - - -2.81 -1.65 -0.4 1.09 1.55 1.74
-7.34 -5.54 -1.65 -1.72 -2.1 1.43 0.49 -3.64 - - 3.2 -0.02 - -0.89 -2.49 -1.0 -3.22 - 2.68 -6.45 -2.61 -3.75 0.02 - 0.48 -0.83 0.69 0.76 - -0.18 -2.0 - -0.13 -7.81 1.76 -1.34 0.75
Zm00001d031794 (GRMZM2G070172)
- - -8.48 - -3.1 -7.69 - 1.51 - - 2.92 -0.12 - -3.77 -2.47 -6.37 -6.25 -5.45 -2.2 - -4.8 - -5.75 -5.68 -6.13 - 4.12 -1.05 - -3.57 2.31 - -5.77 -2.53 -7.8 -1.87 0.65
- - - - -0.88 - - - - - 3.46 -0.86 - - -0.61 1.59 0.87 1.33 -3.99 -0.72 -2.6 2.42 - -0.37 -3.31 2.03 - 1.02 - - -1.47 - -0.56 - -2.17 -0.0 0.61
Zm00001d032870 (GRMZM5G820163)
-4.35 -2.88 -3.3 0.58 1.3 0.82 0.61 -3.79 -1.8 -1.06 3.36 1.57 -1.34 0.96 0.88 -1.06 -2.29 -0.59 -5.39 - -1.49 -1.95 0.87 -2.41 -0.84 -1.55 -1.3 0.03 - - -0.6 - -3.43 -0.35 -4.19 0.53 0.91
Zm00001d034068 (GRMZM2G098892)
-8.49 - -6.41 - -0.64 -5.8 -7.17 -5.93 -5.36 -5.67 1.05 1.89 - -4.71 1.12 -2.93 - -1.17 -1.89 -7.46 -2.88 - -0.62 -5.46 -3.24 -2.59 3.9 -1.28 -0.8 -3.56 0.36 2.45 -4.04 -1.05 0.56 -1.59 0.3
Zm00001d034099 (GRMZM2G395728)
- - -1.76 1.32 -1.2 -0.91 -1.81 -1.83 - -4.54 2.98 0.2 - -0.17 -3.99 0.28 0.05 - -1.63 - -1.23 -0.92 - -5.94 -5.35 0.83 -1.11 -2.1 - 3.12 -1.14 2.42 -1.74 -3.53 -1.26 -0.5 -0.86
- -7.45 -0.04 -2.22 -1.2 3.04 2.73 0.45 -0.73 -2.68 1.79 2.2 - -3.46 -0.67 -2.52 -5.83 -4.44 -1.76 -8.85 -8.04 - -1.11 -4.57 1.28 - -0.34 -2.96 - -3.41 -6.47 - -5.55 -4.41 -1.22 0.89 1.47
Zm00001d036194 (GRMZM2G375425)
-1.65 0.71 -1.15 - -0.9 -2.54 -1.47 0.13 - - 2.62 0.02 - - -1.25 0.54 1.87 1.2 1.23 - -1.32 -0.84 -1.52 1.77 0.15 - - -0.06 - 0.27 1.73 - -1.24 0.41 -0.83 0.53 -
Zm00001d036898 (GRMZM2G018037)
- - - - -0.29 2.27 -5.9 - - - 2.87 -0.5 - 0.99 - 1.69 - - -2.78 -7.69 2.48 -3.17 - - - - -4.15 2.62 - - - - 0.08 -5.74 -4.16 -0.29 2.05
-2.39 -0.59 2.09 1.68 -0.09 - - 0.57 - - 2.37 -1.78 - - -4.59 -0.53 2.97 -2.32 -1.06 - -2.12 1.37 - -0.23 -2.18 - - -0.2 - - 1.28 1.63 -1.07 -2.12 -2.64 -1.3 -
Zm00001d037708 (GRMZM2G316030)
-7.16 - -0.94 -0.9 -0.79 -0.12 -1.48 2.42 0.14 -1.93 1.01 1.27 -5.78 1.1 1.46 -3.58 -1.33 0.52 0.22 -2.64 0.29 -0.73 0.26 -0.81 -0.21 -5.08 -0.83 -0.78 1.27 -1.95 -3.63 -1.87 -2.86 -0.4 0.26 0.06 1.59
0.93 - -0.09 - 0.01 - - -0.69 - - 4.57 -1.05 - - -1.09 -1.47 - -1.11 - - 0.69 1.74 - -0.8 - - - -3.32 - - -0.92 - - -0.71 - -1.66 -
- - - 2.95 0.07 0.14 -1.91 -1.49 - - 2.64 0.94 - 1.56 -2.61 2.02 - -2.05 -1.98 - 0.54 0.47 - 1.53 1.31 - - - - - - - - -2.53 - 1.23 -
Zm00001d039607 (GRMZM2G363554)
-0.78 -2.72 -6.5 -2.78 -0.61 1.47 0.86 2.24 0.07 -0.18 2.09 2.05 -3.06 -1.99 -0.1 -0.45 -0.96 -0.79 -1.53 -7.79 0.21 -0.49 1.58 0.37 0.06 -7.34 -0.79 -3.25 - -2.36 -2.6 -4.4 -1.54 -2.63 -3.31 0.86 0.68
- - - - 0.72 - - - - - 3.77 1.32 - 0.51 - -0.06 - - -1.25 - 0.73 - - - 0.16 - 3.51 - - - - - - - - -3.0 1.07
- - - - - - - - - - 2.03 -3.26 - - - -0.79 3.56 - 0.63 - - - - -2.95 -2.31 - - - - 4.03 0.29 - -4.32 - -4.87 -2.13 -0.6
-0.77 -0.92 1.51 1.35 0.4 - -1.52 -2.23 0.06 -0.79 3.34 0.77 0.25 - -1.83 -0.46 -0.04 1.0 -1.01 -0.69 -0.36 - - - 0.16 - 1.65 -0.85 - - -1.34 - -2.78 -1.02 0.37 -2.08 -0.41
- -0.21 -1.58 - -1.58 - - -1.55 - 0.72 4.37 -0.43 - 0.74 -3.21 -0.37 0.39 - 0.71 - -2.99 - 0.05 -1.56 - - 0.93 -2.54 - - - - -3.8 -0.03 - 0.96 -
Zm00001d042277 (GRMZM5G863364)
- - -2.68 2.39 -0.2 -3.52 -1.25 0.28 - - 2.67 -0.02 - 1.12 - 1.33 -6.94 -2.65 0.9 -3.18 1.2 2.82 - -7.52 -2.66 -2.82 -0.91 -0.77 - -1.17 -2.72 - -1.06 -2.49 - 0.81 0.04
Zm00001d042530 (GRMZM2G017077)
-2.4 - -0.89 - -0.88 1.74 1.72 -2.43 -2.72 -1.08 3.27 0.27 0.05 - -1.6 -0.29 1.56 -2.9 0.48 -3.68 -0.77 0.38 -0.68 -1.29 1.17 - -0.22 -2.07 - 0.12 -2.28 - -0.73 -2.88 - 0.84 -0.71
Zm00001d042568 (GRMZM2G006821)
-1.78 - - 1.39 -1.8 - - - - - 3.61 -2.07 - - - -0.92 - -0.46 0.6 -3.17 - - 3.69 - -0.81 - -0.28 -1.57 - - -2.42 - -3.27 -0.59 0.91 -1.14 -0.9
Zm00001d042739 (GRMZM2G135722)
-7.81 -4.68 - -0.21 -0.95 -1.89 0.48 -0.01 -0.28 -1.2 3.62 2.71 - - 0.99 -4.26 - -2.17 -5.43 -2.53 -7.61 - 1.45 - -0.46 - 1.41 -4.35 - - -0.21 - -5.53 -3.54 -5.45 0.82 0.54
Zm00001d043344 (GRMZM2G156877)
-3.53 -2.71 -1.66 -4.35 2.46 -2.47 -5.63 -4.21 - - 2.84 0.73 - - -0.35 -2.9 - -3.75 -8.18 -5.01 - - 3.03 - -0.92 - 1.91 0.97 -0.86 - -0.23 -0.45 -3.67 -1.94 -0.56 0.52 0.83
Zm00001d043415 (GRMZM2G430606)
- - 2.04 - -0.24 - - - - - 4.48 -3.19 - - - 1.12 - - - -1.06 -0.05 - - - - - 2.31 - - - - - -2.23 - - - -0.33
- - -0.86 - -1.56 - - - - -0.66 3.83 -1.31 - - -2.1 -1.01 0.38 0.52 -0.49 - -2.22 2.59 - -0.97 - - 0.8 -2.32 - - 1.52 - 0.09 0.79 - -0.04 0.44
Zm00001d044048 (GRMZM2G104226)
-2.55 -0.66 -0.19 -1.58 -0.25 2.95 1.99 0.19 -2.02 -1.83 1.93 0.8 -1.26 -3.26 -1.15 -1.53 -0.69 -1.06 -1.05 -7.91 -2.18 -1.61 0.32 -1.16 0.68 -0.46 -2.06 -1.26 -0.03 -4.24 -2.68 -1.92 -2.03 -1.37 -3.03 0.65 1.73
Zm00001d044106 (GRMZM5G888620)
-4.54 -1.93 -2.34 1.36 -0.28 0.91 0.9 0.18 -0.54 -0.75 2.62 1.77 -5.85 -1.0 -0.67 -2.25 -4.05 -2.74 -3.51 -8.15 -2.91 -5.84 2.54 -7.31 -2.25 1.91 -1.18 -1.6 -2.15 -2.18 -4.47 -3.19 0.72 -3.7 -1.99 0.4 0.14
-6.07 - -1.16 - 0.46 1.92 3.31 1.59 -5.77 - 1.53 0.93 - - -7.61 0.9 - -2.91 -0.78 -1.59 - -0.49 - -4.59 -1.87 - 0.88 -0.22 - - 0.44 - -2.48 - 1.79 -5.82 0.93
Zm00001d045160 (GRMZM2G007683)
-1.35 -1.4 -0.43 0.71 -0.16 1.65 1.1 0.56 0.57 0.53 0.99 1.02 -1.18 0.39 -0.11 -0.09 -1.65 -0.91 -0.07 -2.69 -1.17 -1.49 -0.07 -2.37 -0.39 0.56 0.08 -0.51 -0.15 0.17 -0.35 -2.25 -1.74 -1.16 -0.23 0.69 0.6
- - - - -1.65 - - - - - 2.81 -0.97 - - -4.28 -2.42 - - -1.98 0.27 - - 4.17 - -1.92 - - 0.86 - - - - 1.64 -0.74 - - 1.89
- -2.77 -1.39 - 0.58 2.21 - -0.66 - - 3.38 0.34 - -1.24 -4.77 0.06 -4.33 -1.96 -1.81 -6.11 0.46 - -3.42 -1.61 0.39 - -2.13 0.17 - - 1.27 - 0.95 -3.44 2.66 -1.47 -1.65
-4.67 -4.14 - -1.24 0.97 -1.19 -1.17 -0.91 -0.01 -0.7 3.62 2.52 - - 1.17 -3.47 -4.87 - -5.03 -6.68 - - 0.48 - -2.35 - -3.31 -2.05 - - -2.06 - -3.31 -1.36 -1.34 0.55 2.71
Zm00001d047892 (GRMZM2G317871)
- - - - -1.61 -1.49 - - -0.2 - 3.11 0.42 - - -2.06 -0.62 0.71 2.15 2.74 -2.82 -3.81 - 0.84 - 0.78 - 0.55 0.91 - - 0.6 - 0.14 0.61 -1.13 -2.85 -
-0.08 -0.34 -0.85 - -1.51 - - -0.82 - 1.44 3.9 -5.2 - - -2.86 0.42 - - 2.76 - -2.28 - - - - - - - - 2.57 0.76 - - - - -4.65 -
Zm00001d048651 (GRMZM2G178046)
-0.58 -2.81 1.4 2.7 1.6 -0.71 - 0.3 -0.41 -0.61 2.5 -0.23 -1.05 1.43 -1.33 1.4 -1.87 -3.99 -0.0 -3.14 -1.42 -3.01 -3.37 -1.46 -1.6 -2.28 0.04 -0.03 - - -1.21 -0.19 -5.13 -1.82 -0.83 -1.63 -0.76
-1.11 - 0.94 - -0.87 - - - 0.07 0.02 4.14 -1.22 - - -1.08 -0.61 -0.69 - -1.03 - -0.68 - - 0.08 - 0.52 1.65 0.36 - - -1.75 - -0.37 0.1 - 0.45 -0.61
- - -0.49 2.58 0.1 -0.1 -0.21 - - - 3.15 -0.0 - 1.01 -4.19 0.44 -2.1 - 0.62 - -1.67 - - -2.12 -0.1 - - 0.89 - - -1.22 - -0.09 -2.87 -0.24 -1.17 2.64
Zm00001d051725 (GRMZM2G051417)
- - 0.23 - -1.74 2.72 - - - - 4.07 -6.4 - 2.26 - -0.12 0.66 - -1.9 - - - - -0.7 - - - - - 1.91 - - -3.67 - - -2.65 -
- - - - 2.6 - - - - - 4.81 -4.81 - - - 0.55 - - - - - - - - - - - - - - - - - - - - 0.36

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.