Heatmap: Cluster_260 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d001803 (GRMZM2G051917)
0.57 0.66 0.26 0.17 -0.17 -4.9 -6.22 -0.1 -2.97 -3.83 -4.67 -2.69 0.78 0.8 -1.14 0.92 0.6 0.39 1.03 -4.45 0.63 1.18 -5.63 0.64 0.28 -0.9 -0.37 0.68 -1.55 1.25 -0.27 -1.99 0.03 0.54 0.73 -0.62 -0.9
Zm00001d001827 (GRMZM2G084252)
-0.54 0.24 0.78 -0.54 -0.12 -1.25 -0.6 0.02 -1.1 -0.87 0.17 -0.81 0.06 -0.3 -1.03 0.5 1.02 0.43 0.33 -4.38 0.04 0.36 -0.37 1.34 0.21 0.74 -0.08 -0.1 -3.2 0.84 0.66 -1.45 -0.54 0.68 0.02 -0.32 -1.72
Zm00001d003655 (GRMZM2G013283)
0.17 0.99 1.79 0.81 0.04 -2.21 -3.71 -0.49 -1.45 -1.26 0.66 -1.09 -1.05 -0.24 -1.24 -0.25 0.36 0.58 0.79 -6.62 -1.97 -0.37 0.12 1.0 -0.77 -0.57 1.24 0.31 -1.86 0.24 0.25 -2.61 0.08 1.08 -0.98 -0.08 -1.83
Zm00001d005229 (GRMZM2G127683)
-0.03 0.44 0.64 -0.22 -0.09 -1.03 -1.3 0.1 -1.78 -1.83 -0.53 -1.28 0.06 0.61 -1.33 0.52 0.98 0.64 1.34 -3.9 0.25 0.85 -1.58 0.74 -0.18 -0.18 -0.14 0.15 0.51 1.05 -0.19 -0.95 -0.39 -0.02 -0.69 -0.65 -1.07
Zm00001d005756 (GRMZM2G127717)
0.22 1.09 0.6 0.15 -0.19 -2.73 -3.1 -0.34 -2.28 -2.39 -2.28 -2.2 -0.44 0.06 -1.42 0.52 0.74 0.99 1.56 -1.43 -0.21 0.01 -2.1 0.75 -0.32 0.51 0.39 0.65 -0.77 0.68 0.81 -1.66 -0.08 0.69 0.15 -0.82 -1.47
Zm00001d006052 (GRMZM2G007885)
0.4 1.17 -0.72 0.68 -0.17 -9.79 -7.9 0.14 -4.14 -6.0 -5.26 -3.81 0.48 0.13 -1.35 0.78 1.18 0.2 1.44 -7.11 0.49 -0.07 -6.5 0.34 -0.5 -0.13 -0.63 0.68 -0.93 1.93 1.08 -2.4 0.23 0.58 -0.61 -1.14 -1.23
Zm00001d006717 (GRMZM2G129575)
-2.51 0.18 0.35 -0.24 -0.14 -1.68 -0.48 0.17 -1.51 -1.21 -0.21 -0.84 -0.4 -0.03 -1.55 0.49 1.49 0.02 0.94 -5.08 -0.11 0.16 -0.48 1.21 -0.1 0.48 -0.04 0.42 -3.37 1.73 0.24 -3.0 0.23 0.6 -0.9 -0.39 -0.66
Zm00001d007184 (GRMZM2G005103)
0.62 1.17 0.88 0.32 -0.63 -3.09 -3.26 -0.78 -0.87 -1.17 -4.51 -3.05 0.51 0.35 -0.72 0.44 0.61 1.09 1.62 -2.49 -0.91 -1.15 -6.61 0.51 -0.9 1.6 0.48 0.03 -1.22 0.81 -0.31 -1.51 -1.34 0.29 0.58 -0.47 -1.41
-0.89 0.54 0.33 0.62 -0.21 -1.32 -1.38 -0.3 -1.03 -0.96 -0.04 -0.74 0.31 -0.17 -0.93 0.26 1.2 0.47 0.71 -3.57 -0.76 0.62 -0.48 0.81 -0.36 0.14 0.62 0.32 -0.18 0.69 -0.28 -0.36 0.23 0.57 -0.65 -0.32 -1.07
Zm00001d007277 (GRMZM2G172330)
-0.13 0.35 0.9 0.57 -0.03 -2.67 -2.65 0.3 -2.07 -2.2 -0.94 -1.58 1.24 0.82 -0.82 0.68 1.09 0.11 0.06 -6.96 0.07 0.99 -1.8 0.79 0.27 0.49 -0.03 -0.44 -1.42 1.31 0.01 -2.43 -0.65 0.15 -1.65 -0.46 -0.22
Zm00001d007675 (GRMZM2G001777)
-0.21 0.65 0.73 -0.76 -0.16 -1.58 -0.84 0.38 -0.3 -0.12 -1.18 -0.79 -0.48 -0.37 -0.72 0.72 1.02 0.47 0.32 -7.04 0.4 0.25 -0.59 1.17 0.28 -0.44 0.16 0.37 -0.37 0.9 0.2 -3.49 -0.51 0.45 -0.56 0.13 -0.86
Zm00001d008256 (GRMZM2G007915)
-0.21 1.15 0.75 -0.34 0.03 -2.26 -1.57 0.01 -1.37 -1.37 -0.26 -0.95 0.47 -0.6 -1.11 0.42 1.04 -0.16 0.72 -6.78 0.08 0.65 -1.4 0.69 0.19 0.16 0.26 0.81 -0.82 0.72 0.07 -1.22 0.66 0.75 -1.07 -0.63 -1.33
Zm00001d009548 (GRMZM2G060467)
-0.96 0.23 -0.11 -0.51 -0.69 -1.69 -1.71 0.09 -1.99 -1.86 -1.49 -1.06 0.6 1.43 -0.97 0.59 1.24 -0.23 -0.12 -8.01 0.07 1.46 -1.8 0.94 0.19 -0.25 0.17 0.02 -1.72 1.89 0.05 -2.37 -0.35 0.45 -0.53 -0.38 -0.55
Zm00001d011762 (GRMZM2G124876)
-0.97 0.83 -0.07 0.19 -0.14 -5.15 -3.36 0.25 -2.93 -2.75 - -2.8 0.19 0.94 -1.45 1.32 1.36 0.85 0.1 -4.55 -0.08 0.78 -4.84 1.09 -0.58 -1.2 -0.57 1.08 - 1.09 0.12 -2.0 0.81 0.91 0.42 -0.76 -0.27
-0.14 0.41 0.54 0.74 -0.18 -1.92 -1.22 -0.25 -1.96 -1.35 0.23 -1.17 -0.59 -0.22 -1.08 -0.06 1.06 0.57 0.92 -4.65 -1.1 -0.06 -0.67 1.28 -0.37 0.27 -0.15 0.3 -0.29 1.26 0.23 -1.49 0.03 1.11 -0.63 -0.19 -1.15
Zm00001d012329 (GRMZM2G177324)
-0.22 0.22 0.62 0.19 0.03 -1.63 -1.19 0.42 -1.57 -1.44 -0.42 -0.93 -0.34 -0.56 -1.27 0.54 1.12 0.73 0.58 -4.43 0.27 0.29 -1.19 1.21 0.13 0.27 -0.17 0.43 -1.94 1.0 0.18 -2.49 -0.19 0.62 0.2 -0.33 -0.22
Zm00001d013065 (GRMZM2G121176)
0.12 0.82 0.53 1.12 -0.19 -2.45 -1.96 0.64 -1.23 -1.3 -2.85 -1.95 0.42 -0.31 -0.63 0.66 1.25 -0.59 0.17 -7.92 -0.14 0.16 -1.26 1.45 -0.41 0.2 -1.11 -0.37 - 2.11 0.2 -2.99 -1.38 -0.32 0.82 -0.61 -1.36
Zm00001d013112 (GRMZM2G028813)
-2.6 -1.49 -0.55 0.08 -1.04 -5.7 -7.72 0.27 -8.47 -8.04 -6.34 -4.32 0.18 0.53 -3.18 1.21 1.46 0.02 -0.2 -4.18 1.31 1.83 - 0.81 0.48 -1.19 0.56 1.23 -2.86 1.58 -0.29 -0.99 1.06 0.74 -0.25 -1.9 -0.94
Zm00001d015014 (GRMZM2G005680)
0.01 1.17 0.22 0.37 -0.54 -4.09 -4.16 0.28 -2.25 -2.39 -2.74 -2.55 0.07 -1.05 -1.13 0.54 1.36 0.45 0.57 -3.21 0.44 0.24 -3.91 1.23 -0.32 0.35 -0.33 0.91 -0.04 0.52 0.24 0.16 0.65 0.96 -0.2 -1.01 -1.8
Zm00001d015435 (GRMZM2G335638)
0.87 1.24 0.78 0.6 0.11 -3.71 -4.31 -0.46 -2.33 -2.97 -4.86 -3.17 0.32 0.74 -1.38 0.93 0.42 0.5 0.7 -13.07 -0.72 0.58 -6.6 0.25 -0.99 -1.47 -0.14 0.81 -1.71 1.55 0.51 -3.32 0.76 1.03 0.09 -0.44 -1.09
Zm00001d015600 (GRMZM2G018962)
0.36 1.02 0.35 0.31 -0.06 -3.6 -3.8 -0.23 -1.95 -2.1 -1.91 -1.83 0.17 0.55 -1.12 0.55 0.76 0.45 1.39 -4.86 0.17 0.1 -3.49 0.79 -0.72 -0.41 -0.74 0.21 1.28 1.12 -0.02 0.11 -0.0 0.21 0.21 -0.78 -2.07
Zm00001d016406 (GRMZM2G341732)
0.69 0.44 0.62 0.55 -0.22 -3.75 -3.73 -0.71 -2.61 -3.04 -4.07 -2.0 0.09 1.38 -1.17 0.87 0.83 0.07 0.31 -4.52 -0.14 0.01 -1.75 0.27 -0.63 0.01 0.18 0.77 -1.04 2.01 0.02 -2.0 0.35 0.88 -0.84 -0.29 -0.75
Zm00001d016838 (GRMZM2G702026)
-0.51 -0.72 0.39 0.02 -0.22 -0.96 -1.32 -1.06 -1.28 -1.26 -0.68 -0.77 0.87 0.77 -0.78 0.94 0.63 0.14 0.37 -10.27 0.45 1.21 -1.54 0.47 0.31 -0.7 0.08 0.55 -3.49 0.43 0.41 -1.75 0.5 0.69 0.28 0.13 -0.13
Zm00001d017067 (GRMZM2G057184)
-0.23 0.3 0.93 -0.05 0.0 -1.32 -2.19 0.18 -1.78 -1.78 -2.14 -1.46 0.76 0.3 -0.91 0.59 1.38 0.4 0.52 -2.04 0.04 1.56 -1.44 1.14 0.34 -0.36 0.25 -0.04 -4.17 0.81 -0.06 -3.21 -0.62 -0.33 0.37 -0.53 -0.99
Zm00001d017553 (GRMZM2G345991)
-1.55 -0.12 -0.61 0.16 -0.65 -2.76 -1.22 -0.04 -2.84 -3.4 -4.43 -1.14 0.49 0.99 -1.21 1.47 0.78 0.29 -0.72 -10.03 0.47 0.88 -3.21 0.57 -0.14 -3.57 -0.34 1.05 -1.05 1.77 0.74 -0.75 0.4 0.3 0.9 -0.8 0.1
Zm00001d018233 (GRMZM2G141642)
-1.43 -0.44 0.37 -0.26 -0.26 -3.31 -3.27 -0.1 -2.49 -2.95 -0.89 -1.85 -0.31 0.21 -1.62 0.77 1.49 -0.08 0.35 -5.77 0.47 0.34 -3.29 0.76 0.01 -1.07 0.54 1.09 0.01 1.75 0.41 -2.44 1.17 0.83 -0.14 -0.75 -0.54
Zm00001d019430 (GRMZM2G169914)
-0.35 1.3 -0.59 -0.44 -0.68 -5.63 -2.68 0.7 -3.77 -4.41 -5.44 -3.35 1.07 -1.99 -1.61 0.73 1.3 0.29 0.58 -2.7 -0.16 0.94 -6.01 1.22 1.17 0.47 -0.26 -0.06 -3.69 1.23 1.36 -1.83 -0.26 0.61 0.36 -1.65 -2.39
0.46 -0.01 0.68 0.83 -0.01 -2.39 -2.55 -0.43 -2.32 -2.62 -1.36 -1.53 0.03 0.53 -1.14 0.49 1.17 0.37 1.36 -9.59 0.0 0.94 -2.7 0.72 -0.03 -0.05 0.06 0.3 0.08 1.52 -0.86 -0.9 -0.67 0.18 -0.8 -0.6 -0.59
Zm00001d021287 (GRMZM2G386971)
0.01 0.18 0.53 0.27 -0.7 -3.36 -3.72 -0.29 -2.3 -2.36 -2.27 -2.28 0.67 0.94 -1.12 0.44 0.81 0.91 1.18 -1.16 -0.54 -0.21 -2.28 1.11 -0.47 0.43 -0.69 0.84 -1.03 1.2 -0.36 -0.98 0.6 0.71 0.67 -0.9 -1.43
Zm00001d021828 (GRMZM2G006942)
-0.64 0.33 -0.07 0.11 -0.71 -4.78 -4.13 0.02 -0.6 -1.93 -3.05 -2.47 0.95 -0.49 -1.07 0.36 1.2 0.23 0.52 -9.11 -0.09 0.57 -3.95 0.91 0.27 -0.32 0.26 0.86 -1.41 1.91 0.62 -1.39 0.54 0.72 0.2 -0.33 -1.55
Zm00001d021903 (GRMZM2G072526)
0.34 1.14 0.86 -0.11 0.1 -3.74 -2.75 -0.05 -3.8 -4.55 -4.68 -2.89 0.51 0.15 -2.47 1.18 1.4 0.03 1.56 -10.23 0.38 0.7 - 0.99 -0.18 -1.42 -0.85 0.52 - 1.81 1.04 -1.64 -0.23 0.07 -1.86 -1.69 -2.88
Zm00001d022046 (GRMZM2G313553)
-0.9 0.8 0.08 0.65 -0.59 -3.67 -4.33 0.1 -2.8 -3.21 -0.31 -1.55 -1.01 -0.46 -2.33 1.0 1.16 0.33 1.52 -2.28 -0.25 0.11 -0.46 1.1 -0.49 -0.01 0.05 0.65 - 1.94 0.32 -3.25 0.37 0.56 -0.35 -0.65 -1.43
Zm00001d024300 (GRMZM2G009353)
-0.92 -0.67 0.83 0.55 0.41 -2.9 -2.77 -0.35 -1.32 -1.2 -4.15 -1.72 -0.06 0.18 -0.66 0.71 1.34 0.34 0.76 - 0.25 0.57 -3.71 0.6 -0.24 -0.96 0.17 0.74 -0.51 1.53 -0.23 -1.52 0.42 0.56 -0.02 -0.15 0.33
Zm00001d025268 (GRMZM2G137451)
0.17 0.68 0.43 0.73 0.02 -2.01 -2.06 -0.03 -1.96 -2.38 -1.22 -1.44 0.77 -0.14 -1.0 0.61 1.2 0.35 0.11 -9.39 -0.27 1.28 -2.3 1.4 0.52 -0.47 -0.12 -0.54 - 1.59 0.16 -3.55 -1.34 -0.62 0.89 -0.55 -0.75
Zm00001d025939 (GRMZM2G155543)
-0.5 -0.12 0.46 -0.7 -0.38 -3.45 -2.53 -0.51 -0.7 -2.05 -4.09 -1.95 0.96 -0.0 -0.5 0.6 1.16 0.34 0.53 -7.69 1.09 0.98 -3.36 0.89 0.55 -1.01 0.08 0.44 -0.82 0.89 0.47 -1.32 0.63 0.71 0.45 -0.51 -1.09
Zm00001d027886 (GRMZM2G064732)
0.62 0.88 0.26 0.68 -0.36 -3.04 -3.7 -0.03 -1.59 -2.15 -3.49 -2.32 0.38 0.21 -1.11 0.59 1.11 -0.08 0.42 -6.91 0.01 -0.35 -1.47 0.71 0.2 0.51 0.06 0.7 -1.77 1.3 0.78 -2.35 0.54 0.54 0.42 -0.5 -1.08
Zm00001d031570 (GRMZM2G096806)
-0.91 -1.88 -1.04 0.48 -0.73 -1.64 -1.87 -0.11 -1.35 -1.41 -0.7 -1.08 0.07 0.85 -0.19 0.45 0.7 0.01 -0.09 -3.95 -0.34 -0.21 -0.37 0.56 -0.6 1.33 -0.48 0.95 -2.32 1.02 0.59 -3.52 0.72 0.42 1.11 0.12 0.87
Zm00001d033648 (GRMZM2G002699)
0.85 1.25 0.65 0.48 -0.03 -3.75 -3.64 -0.21 -2.41 -3.3 -3.51 -2.72 1.08 0.53 -0.99 0.8 0.85 0.48 1.68 -5.98 -0.17 0.25 -6.33 0.16 -0.35 -0.44 0.22 0.11 0.6 1.4 -0.2 -1.7 -0.88 0.13 -1.61 -0.83 -1.92
Zm00001d034480 (GRMZM2G163912)
0.28 0.31 -0.23 -0.14 -0.52 -4.28 -4.29 0.15 -2.11 -2.31 -4.24 -2.04 1.19 0.12 -0.69 0.73 1.01 -0.01 0.51 -9.02 0.27 0.48 -3.22 1.22 0.57 0.06 -0.9 0.4 -2.19 1.89 0.49 -1.99 -0.15 0.46 0.64 -0.3 -1.29
Zm00001d034553 (GRMZM2G111642)
-2.48 -1.79 -0.16 -0.58 -0.63 -1.37 -1.99 -0.18 -0.73 -0.51 -1.51 -0.99 0.74 1.45 -0.22 0.88 0.48 0.02 0.05 -7.72 -0.3 0.37 -3.07 0.23 -0.49 -0.48 -0.44 1.26 -0.99 1.38 0.43 -1.7 0.83 0.64 0.69 0.27 0.3
Zm00001d035773 (GRMZM2G104377)
-0.13 0.57 -0.03 0.32 -0.28 -1.47 -1.66 -0.21 -1.93 -1.55 -0.58 -1.02 0.43 0.92 -1.01 0.55 1.05 0.23 0.63 -7.73 -0.12 0.55 -1.57 0.61 -0.53 0.31 -0.33 0.6 -2.69 1.82 0.44 -3.0 0.09 0.66 -1.02 -0.17 -0.81
Zm00001d036428 (GRMZM2G048644)
-0.19 0.7 0.64 1.2 0.36 -2.5 -2.72 -0.61 -2.4 -2.9 -2.7 -2.41 -0.65 -0.26 -1.56 0.37 0.77 0.58 1.44 -1.63 -0.57 -0.21 -1.82 0.58 -0.73 1.09 0.0 0.16 -1.31 1.71 1.14 -2.71 -0.65 0.47 0.08 -0.66 -1.12
Zm00001d036829 (GRMZM2G092895)
0.04 0.19 0.12 -0.06 -0.22 -2.32 -3.15 -0.12 -1.92 -2.13 -1.52 -1.44 -0.62 -0.2 -1.31 0.67 1.37 -0.03 0.98 -6.97 0.3 0.88 -3.69 0.72 0.07 0.37 -0.32 0.79 -3.8 1.69 0.27 -6.47 0.83 0.65 0.2 -0.4 -0.01
Zm00001d041445 (GRMZM2G701689)
-0.57 0.58 0.78 0.92 -0.06 -1.9 -1.9 -0.18 -1.72 -1.38 0.05 -0.86 0.24 1.35 -1.03 0.34 0.89 -0.09 0.39 -5.4 -0.59 0.38 -1.45 0.51 -0.87 0.65 -0.49 0.41 -2.53 1.62 -0.32 -1.68 -0.04 0.01 0.22 -0.3 -0.46
-1.96 -0.25 -0.77 -0.26 -0.38 -3.16 -3.32 0.57 -2.72 -2.84 -2.51 -2.3 0.27 -0.13 -1.31 0.86 2.08 0.55 0.14 -5.4 0.7 1.08 -3.29 1.14 0.14 0.14 0.22 1.13 - 0.59 0.06 -0.89 0.75 0.75 -0.21 -0.64 -0.69
Zm00001d045757 (GRMZM2G408359)
-0.44 0.56 0.17 -0.05 -0.66 -2.91 -3.07 0.28 -2.15 -1.99 -1.14 -1.55 0.77 -0.09 -1.45 0.52 1.26 0.58 0.9 -6.87 -0.38 1.09 -2.5 1.05 0.49 -0.54 0.07 0.14 -2.27 1.53 0.01 -1.97 -0.19 0.36 1.16 -0.8 -1.27
Zm00001d049326 (GRMZM2G391000)
-0.39 0.88 0.08 0.08 -0.49 -2.03 -1.39 0.07 -2.22 -1.42 -0.6 -1.24 0.36 -0.15 -1.49 0.5 1.17 0.95 1.63 -5.36 -0.34 0.72 -1.03 0.95 0.04 -1.12 -0.65 0.63 -0.56 1.4 -0.31 -1.86 0.08 0.31 -0.61 -0.59 -1.34
Zm00001d051607 (GRMZM2G158093)
1.07 2.33 0.04 -0.61 -0.15 -3.31 -3.28 -0.85 -3.9 -3.65 -0.6 -2.62 -0.51 -0.5 -1.99 0.43 -0.23 1.06 1.78 -3.81 -0.36 0.17 -1.47 0.97 -0.45 0.12 -0.69 0.07 0.61 0.84 -0.0 -1.11 -0.67 -0.12 0.7 -1.59 -3.09
Zm00001d052929 (GRMZM2G119791)
0.08 0.62 0.42 -0.09 -0.24 -2.37 -2.67 -0.31 -1.63 -1.54 -1.21 -1.49 0.09 -0.16 -0.97 0.6 1.46 0.28 0.32 -3.61 -0.21 -0.32 -0.38 0.59 -0.01 -0.44 -0.33 0.7 0.13 1.48 0.1 -0.25 0.5 0.75 0.41 -0.68 -1.11
Zm00001d053610 (GRMZM2G043056)
0.32 0.39 0.19 0.8 -0.24 -2.29 -2.59 -0.18 -2.57 -2.67 -3.09 -1.51 0.27 1.37 -1.05 0.47 1.09 0.09 0.14 -7.7 -0.37 0.61 -1.58 0.62 -0.47 0.56 -0.27 0.33 -1.99 1.72 0.35 -2.2 0.04 0.79 -0.68 -0.13 -0.1
Zm00001d053761 (GRMZM2G020986)
-0.17 0.56 0.16 0.74 0.46 -3.89 -4.15 -0.23 -1.96 -1.84 -3.58 -3.0 0.51 0.83 -1.09 0.84 0.92 -0.03 0.96 -6.66 0.27 0.78 -4.62 0.99 -0.6 -2.94 0.11 0.79 -2.1 1.73 -0.18 -0.8 0.4 0.36 -0.53 -0.28 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.