Heatmap: Cluster_57 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Ovary
Microspore
Generative cell
Pollen
Sperm cell
Pollen grain
Pollen tube
Pollen tube (1.5h)
Pollen tube (3h)
Pollen tube (9h)
Pistil
Style (before flowering)
Style (after flowering)
Style (pollinated, after flowering)
Flower (buds)
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Pericarp/Exocarp (4 DPA)
Pericarp
Pericarp (5 DPA)
Pericarp (7 DPA)
Pericarp (10 DPA)
Fruit (mature green)
Fruit (breaker stage)
Septum (7 DPA)
Septum (10 DPA)
Septum/Seed (4 DPA)
Seed (5 DPA)
Seed (7 DPA)
Seed (10 DPA)
Seeds (10 DPA)
Seeds (20 DPA)
Seeds (30 DPA)
Seeds (Pk-stem)
Seeds (Br-stem)
Seeds (Pk-equatorial)
Seeds (Pk-stylar)
Seeds (Br-stylar)
Seeds
Seeds (RR)
Seeds (LR)
Seeds (MG-equatorial)
Hypocotyl
Seedling (leaves)
Seedling (roots)
Callus
Meristem (vegetative)
Meristem
Apical meristem
Leaf
Root
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root hair cells
Solyc01g081584.1.1 (Solyc01g081584)
- - -16.26 1.2 - 3.86 - -1.59 -2.71 - - -3.89 - -2.12 - - 2.54 1.59 - - -2.3 1.84 - -2.75 -2.07 - - -2.6 -1.27 0.81 -2.2 1.53 2.43 -0.66 -1.11 -0.04 1.52 1.71 - -0.63 - 0.67 0.89 1.51 -3.71 -3.19 - - 0.34 - - - -5.57 - - - - -
Solyc02g030462.1.1 (Solyc02g030462)
- - -0.62 2.51 1.1 2.66 1.32 -0.92 -0.36 -1.32 -1.94 -0.6 -1.44 -0.19 0.18 0.68 2.55 0.78 - - 0.06 -1.89 -1.28 -0.79 0.03 - - 0.5 0.22 -1.27 0.1 1.19 1.8 - 0.63 -1.27 -0.36 -1.7 - -0.78 - -1.0 -0.18 2.18 -0.6 - -3.2 - -0.19 -2.71 - - -2.33 - -1.37 -0.26 -0.75 -
Solyc02g062990.1.1 (Solyc02g062990)
- - -1.84 1.61 -3.1 - -3.69 - - - - - -0.69 -0.52 - -3.43 3.01 -0.43 -2.54 1.61 1.68 - 3.49 3.33 2.39 - - 0.75 1.39 0.78 -2.32 -1.87 -0.92 - - - - - - - - - - - - -0.44 -2.8 -0.68 -3.19 -4.64 - -0.59 0.88 -2.75 - - - -
Solyc02g065114.1.1 (Solyc02g065114)
- - - 1.2 -0.67 - - -4.34 - - - - - -0.93 - - - -0.57 -0.02 - - -1.55 - -3.49 -0.77 -1.87 - -2.55 -0.1 -1.71 - 0.09 1.88 - 2.11 - 2.65 1.76 - 3.15 2.69 1.84 1.87 2.23 -0.11 -0.55 - - 0.08 - - -1.55 -0.21 - - - -1.57 -
Solyc02g069053.1.1 (Solyc02g069053)
- - -1.1 -0.3 1.87 - -0.35 - - - - - 0.25 - -1.16 -2.22 - -2.18 - 1.88 - - -1.11 -0.14 1.27 - -0.26 1.18 4.42 0.81 0.38 0.27 -1.03 - - - - - - - - - - - - - - 2.62 - - - - -0.34 2.73 - - - -
Solyc03g005550.3.1 (Solyc03g005550)
-3.27 - -3.37 2.11 -0.46 2.92 -0.41 1.03 0.88 -3.03 -2.59 -2.3 -2.68 0.19 -1.5 -0.87 2.15 0.03 - - -0.77 1.27 -2.55 -1.19 -1.98 -2.59 - -0.35 -1.51 0.62 -0.15 2.78 2.74 -0.55 1.11 -1.93 0.21 -0.62 0.32 -0.96 0.99 -0.54 -2.1 - -4.21 - - - 0.25 - -4.1 - -4.61 - - - - -1.5
Solyc03g034290.2.1 (Solyc03g034290)
- - - - - - - - - - - - - - - -23.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.23 - - - 0.02 4.28 - - - -
- - - 1.1 - - - -0.38 0.54 - - - 0.25 4.66 3.24 1.23 1.12 -0.93 - - - 0.97 - -4.15 -3.14 - - - - - - - - - - -0.67 - -1.01 - - - -1.53 - - - - - -1.04 1.99 - - -0.85 0.48 0.36 -0.09 - - -1.46
- - - 0.12 -1.75 - - - - - - - -2.23 -3.96 - - -1.45 - - - -2.25 - - - -1.12 - -1.86 - -0.4 - -1.13 -1.05 1.21 - 3.8 0.17 2.45 1.86 1.92 2.1 0.33 1.77 1.4 3.18 0.28 - - - 0.17 - - - -3.95 - - - - -
- - - 2.21 3.2 - - - - - - - 1.65 - - - - - - - - - - - - - - 2.12 - - 0.1 - - - - 1.61 - - - - - - - - - - - - 4.93 - - - 1.12 - - - - -
Solyc04g051783.1.1 (Solyc04g051783)
- - - - - - - - - - - - - - - - 4.1 - - - - 3.85 - - - - - - - - - 0.58 - - - - - - - 3.71 - -0.22 - - - 1.83 - - 1.54 - - - 2.15 - - - - -
Solyc04g150170.1.1 (Solyc04g150170)
-0.97 - - 2.48 - - - -3.98 - - - - 1.04 0.47 - -1.1 0.24 -0.82 - -1.46 -1.35 - -1.19 -0.82 -0.33 - - -0.93 -1.81 0.45 -0.96 1.21 2.69 - 2.36 1.21 - 1.06 - 2.29 2.42 1.18 1.0 - - 0.13 - 0.2 1.73 - - -0.24 0.47 -1.43 - - - -
Solyc05g039960.1.1 (Solyc05g039960)
0.48 - - - 1.08 0.61 - 1.71 -0.24 -1.25 -1.3 -1.11 - 0.52 2.29 1.58 2.8 3.87 - - - 1.76 - - - - - - 0.53 - - - - - - - - - - - - - - - - 0.3 - 1.8 1.29 - - - 1.44 - 1.02 - - -
Solyc06g005880.4.1 (Solyc06g005880)
- - -0.01 -1.72 -0.74 - -1.39 - -4.43 - - - -2.3 - - -2.37 2.82 -0.91 - -1.56 - 4.09 -2.15 - - -1.11 - - -0.32 - -1.97 -2.44 -1.88 1.07 - - - - - - - -3.34 - - 0.31 2.49 - 2.05 1.08 - - - 0.28 3.53 - - - -
- - - 1.14 4.25 - 2.33 -0.54 - - - - - - - - - - - - - - - - - - - - 0.43 - - - 0.11 - - - - - - - - - - - - 3.11 - 2.5 3.3 - - - 0.77 1.45 - - - -
Solyc06g009960.3.1 (Solyc06g009960)
-7.62 -6.24 -5.47 -5.01 -5.99 - -6.56 -6.92 -7.74 -7.39 -7.36 -8.27 -6.23 -0.69 -2.64 -3.24 -0.21 -7.28 -7.79 -7.24 -2.14 -7.14 -1.77 -1.94 -1.82 -3.11 -2.86 -1.76 -2.02 -2.02 -1.59 -1.25 -0.92 -4.18 -0.11 -1.22 2.95 2.34 3.07 2.19 1.93 1.99 3.27 2.4 0.12 -0.93 -3.02 -2.33 -4.72 -2.83 -4.87 -7.3 -3.77 -4.99 -2.72 -2.52 -2.21 -9.16
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 2.0 - - - - - - 5.75 - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - 3.95 - - - - - - - - - - - - - - - - - 4.06 - - - - - - 4.62 - - - 0.41 - - - - -
Solyc06g034380.1.1 (Solyc06g034380)
- - - 1.7 - - - -2.31 -0.83 - - -0.88 - - 0.18 - 1.62 - 2.47 - - - - -1.21 -0.69 - - 0.31 0.74 - - - -0.67 - - 4.21 - - - 2.18 - 0.69 - - 2.73 - -0.67 - -0.07 0.08 - - 0.28 - - 1.12 0.9 -
- - 1.39 2.44 - - - - - - - - -1.06 - - -0.48 - 0.04 1.33 2.67 - 3.82 - - - -0.07 -1.06 - - - - - - - - - - - - - - - - - - - - 0.05 3.28 - - - 1.57 3.07 - - - 0.29
Solyc06g050780.1.1 (Solyc06g050780)
- - - - 1.22 - - -0.74 - - - - -0.5 4.32 3.7 3.07 - -1.66 - - - - - - - - -1.32 - - - - -2.1 - - - - - 0.24 - - - -1.46 - - - - - - 2.29 - - - -1.12 2.09 - -0.35 - -
Solyc06g074280.2.1 (Solyc06g074280)
-2.55 - 0.23 2.25 1.69 - -2.85 -4.82 -5.49 - - - 0.72 -1.43 - -2.98 3.71 -0.43 -0.99 0.58 -0.46 -1.99 -1.18 -0.21 -1.83 -2.64 -3.24 -0.49 -1.06 -0.39 -0.55 -1.62 -0.79 - -1.2 - -1.1 -0.17 - - -1.06 -1.31 -1.06 -1.02 - 2.21 -2.69 1.42 0.24 -0.62 0.95 1.64 1.69 -0.29 -1.3 -2.63 -2.75 0.49
-2.35 -1.78 -1.34 -2.35 - - - - - - - - -0.6 -0.11 1.74 0.09 1.42 1.61 -0.13 0.73 0.5 - 0.14 0.73 -0.83 -3.6 -5.9 1.12 -0.5 1.36 2.48 1.66 1.22 - 1.53 -3.1 - - - - - -5.99 - - - 2.54 0.1 1.4 -0.09 0.16 -2.8 -2.15 0.48 0.62 1.28 -1.35 -3.45 -1.18
Solyc06g150116.1.1 (Solyc06g150116)
- - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc07g019498.1.1 (Solyc07g019498)
-2.55 -2.79 0.3 -1.45 - 3.23 -2.85 -3.1 -2.2 - -1.66 - -4.1 -6.23 - -3.98 2.47 0.0 - - -3.3 0.84 - -1.96 -4.4 - - -2.92 -0.86 0.0 - -0.58 -1.37 0.28 2.13 -0.48 2.21 1.35 1.4 1.2 2.72 1.29 2.42 - 0.29 - - - -2.64 - - - -6.39 -3.18 - - - -
Solyc07g026600.1.1 (Solyc07g026600)
-0.2 - - - - - - - - - - - - - - - 3.86 - - - - 4.94 - - - - - - - - - - - - 1.23 0.82 - - - - - -2.7 1.6 - - - - - -0.15 - - - 1.86 - - - - -
- - - - - - - - - - - 2.46 2.7 - - - - - - - - - - - - - - - - - - - - - 5.46 - - - - - - - - - - - - - - - - - 0.92 - - - - -
Solyc07g052010.3.1 (Solyc07g052010)
- - - - - 0.57 - - -2.3 - - - 0.5 -0.72 - -1.98 3.14 - - - -0.52 1.13 - -0.72 - - - - - 0.31 0.31 2.46 2.46 2.86 2.12 - - 1.93 - - - -2.71 - - - - - 0.93 2.89 - - 0.09 1.22 - - - - -
Solyc07g150141.1.1 (Solyc07g150141)
- - - - - - -2.49 -3.9 -2.76 - - - -3.4 - - - -0.0 -4.15 - - -0.05 1.5 - -1.92 0.14 -2.75 - 0.18 0.39 1.66 0.44 1.38 1.95 3.14 3.6 -0.1 -0.87 -0.26 2.17 0.12 1.17 -0.04 0.8 0.21 0.8 - - - -1.0 -3.32 - -2.43 -2.28 - - - - -
Solyc08g067125.1.1 (Solyc08g067125)
- - - - - 2.93 0.28 - -1.77 - -2.79 - - - - - -5.64 0.78 - - -1.69 - - -2.96 - 1.2 -0.62 - 0.47 - 1.18 1.52 0.58 - 1.3 - 0.54 - 1.71 - - 0.17 4.05 2.47 2.06 - - - -0.14 - - - -3.41 - - - - -
Solyc09g014260.1.1 (Solyc09g014260)
- - - - - - - - - - - - 3.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.56 - - - - - - - - -
Solyc09g014270.1.1 (Solyc09g014270)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - - - - - - -
-2.42 -2.09 -4.95 1.67 -0.79 -2.26 -2.18 -1.31 -1.49 -3.43 -3.01 -2.91 -3.19 -1.79 -2.77 -2.17 -1.35 -4.48 - -0.83 0.19 - -1.06 0.01 0.48 -1.63 -4.18 0.2 -0.0 -1.46 1.03 1.43 1.99 -2.02 1.8 -1.4 -0.3 -1.44 -0.5 -0.41 -0.82 -1.28 0.3 -1.78 -1.88 1.27 - -0.32 -2.57 -0.27 1.3 - -1.36 -3.97 1.7 2.42 3.17 -0.78
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.86 - - - - -
Solyc10g150108.1.1 (Solyc10g150108)
-0.7 -0.49 0.59 - 0.02 0.56 - 0.79 1.87 3.0 2.49 2.38 -1.8 - - - - 2.03 1.59 - -1.48 2.04 - -0.31 -1.15 0.09 -1.79 - 0.32 - 0.88 -0.24 1.06 - - - - - - - - -3.18 - - - -1.14 - - 2.26 - - - -0.76 0.39 - - -0.51 -
Solyc11g072120.2.1 (Solyc11g072120)
-1.13 -2.15 0.8 -2.75 -4.38 - - -8.3 -10.08 - - - 1.37 1.39 0.23 0.36 3.02 0.95 -1.08 -0.84 1.08 1.33 1.0 0.74 0.59 -1.06 -1.34 1.41 0.96 0.84 -0.04 0.11 -0.04 -2.22 -2.22 -2.95 -2.61 -3.13 -3.34 -2.98 -4.34 -2.93 -3.27 -2.61 -3.84 1.22 -2.16 2.09 -3.66 -0.66 -1.32 0.36 1.13 0.86 -0.03 -0.99 -3.44 -2.54
Solyc11g072130.2.1 (Solyc11g072130)
-0.99 -2.06 -0.37 -1.73 -4.04 - - - - - - - 1.16 2.79 0.58 1.04 1.74 -0.32 -0.01 0.13 1.7 -0.03 1.63 1.39 1.04 -2.04 -2.83 1.65 0.75 1.03 -0.28 0.15 -0.34 -3.74 -4.97 -4.35 -4.69 -4.93 -3.59 -5.1 - -4.23 -3.6 - -4.75 1.31 -0.06 1.22 -3.19 -2.69 -1.7 0.81 0.3 1.99 -0.3 -1.5 -6.25 -2.05
-1.9 -1.76 -2.4 0.43 -1.08 - - -2.78 -3.94 -1.91 -2.73 - -2.54 -1.65 -1.31 -2.4 3.26 2.91 -0.5 1.05 -1.75 0.09 -3.36 -1.52 -5.17 -1.32 1.04 -1.21 -2.28 - - -2.59 -4.76 - 0.27 - - - - - - -4.42 - - - 2.14 0.14 -1.13 3.41 -3.58 -3.24 0.89 2.2 -0.84 -0.3 1.43 -2.63 -
Solyc12g042750.2.1 (Solyc12g042750)
- - 2.71 -2.34 - - - -0.39 -0.91 -3.7 - - - 2.3 2.44 2.32 - 1.61 - - - 4.66 - - - - - - - - - -2.92 -4.02 - - - - - - - - - - - - - - -3.15 -0.53 -1.47 - - 2.26 - - - - -
Solyc12g043170.1.1 (Solyc12g043170)
- - - - - - - - - - - - - 3.07 5.04 2.38 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.53 - - - - -
Solyc12g044170.1.1 (Solyc12g044170)
0.82 -0.63 0.4 0.07 -0.2 - -4.4 - - - - - 0.16 -0.83 0.08 -0.24 1.93 -0.39 0.09 0.06 0.58 -0.03 -1.9 0.08 -0.36 0.36 -0.45 0.83 1.73 0.87 -0.94 -0.5 -0.42 - 0.25 -0.46 -0.82 -1.23 -1.74 -1.8 -2.87 -1.24 -0.7 0.3 -0.23 2.9 -3.43 0.53 0.04 -2.07 -0.0 0.26 1.2 0.27 -2.0 -2.73 -2.11 1.67
Solyc12g150119.1.1 (Solyc12g150119)
- - 1.63 - - - - - - - - - - - - - 4.83 -1.88 - - - 4.64 - - - - - - - - - - - - - - - - - - - - - - - - - - 0.02 - - - -3.43 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.