Heatmap: Cluster_104 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002176 (GRMZM2G175321)
- - - - -4.55 - - - - -4.9 - -4.78 - - -5.3 -5.86 - 4.55 3.29 1.3 - -2.58 - - -7.55 - - -3.52 - - - -0.39 -6.86 -7.3 -4.53 -3.4 -
Zm00001d003060 (GRMZM2G382747)
- - - - -0.13 - -2.09 0.15 - - -1.13 -2.71 - - - -4.6 - 3.31 3.94 -0.58 -3.96 - - - -1.22 - -0.4 0.11 - - 0.55 - 0.42 0.01 -1.53 0.58 -2.65
Zm00001d004691 (GRMZM2G132154)
- - -2.96 - -4.15 -8.12 - 2.01 -5.34 -7.49 - -3.05 - -3.54 -2.25 -3.04 2.35 3.25 1.8 -1.63 -0.74 -2.66 - 0.49 -1.44 -5.89 -4.05 0.39 -0.19 0.31 -3.08 1.74 0.32 1.12 -0.93 -2.2 -2.84
Zm00001d006050 (GRMZM2G014526)
- - - - -10.24 -5.89 -7.72 - -6.31 -5.02 - -5.32 - - -2.7 -5.34 -8.23 4.49 3.5 -8.84 -6.52 0.01 - - -10.56 - -4.71 -5.11 - - -7.0 0.39 -4.49 -7.76 -2.47 -3.16 -3.16
- - -1.15 - -3.32 -2.58 - - - 0.03 - -1.75 - - -3.11 -2.53 - 3.69 4.35 - - - - - - - -0.82 - - - -2.1 - - - -3.41 -0.97 -
- - - - - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - 3.35 4.46 2.29 - - - - - - - - - - - - - - - - -
Zm00001d010584 (GRMZM2G179728)
- - - - -5.37 - -2.08 - - - - -6.91 -3.02 -0.73 - -3.46 - 3.18 3.54 0.23 -3.49 - - -1.86 -2.97 - 3.28 1.59 - - - - -3.84 -0.68 - -4.08 -4.86
Zm00001d011442 (GRMZM2G070913)
- 0.51 - - 0.93 - - - - - - -7.27 - - -7.57 -2.99 - 2.57 3.42 -5.96 -6.18 - - - -2.47 -0.28 -3.43 -0.06 3.32 - -6.7 1.98 -7.55 -0.49 -6.62 -3.51 -4.23
Zm00001d011940 (GRMZM2G460581)
- - - - -12.64 - - - - - - -14.13 - - - -4.57 - 3.55 4.64 - - -3.8 - - -11.56 - - -8.95 - - - -2.59 -7.99 -9.6 - -10.59 -
- - - - - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - -
Zm00001d012366 (GRMZM2G700784)
- - - - - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - -
Zm00001d012371 (GRMZM5G809262)
- - - - - - - - - - - - - - - - - - 4.89 2.26 - - - - - - - - - - - - - 0.69 -0.26 - -
Zm00001d012375 (GRMZM2G470249)
- - - - -0.75 - - - - - - - - - - - - 2.31 4.45 1.92 2.54 - - - - - - - - - - - - - - - -
Zm00001d014931 (GRMZM2G040311)
-0.73 -2.87 - - -2.43 - - - - -4.99 - -5.77 -1.95 -0.5 -4.44 -2.86 -4.13 4.01 3.98 -3.5 -5.76 0.18 - -5.54 -3.09 -3.84 - -2.69 - - -3.31 - -2.6 -6.49 -0.42 -4.41 -2.44
Zm00001d016620 (GRMZM2G504595)
- - - - -11.86 - - - - - - - - - - -4.35 - 2.88 4.89 -10.34 - - - - - - - - - - - - - - - - -
- - - - -3.9 - -4.3 - - - - -3.28 - - -4.75 -5.29 - 3.73 4.23 0.16 -3.88 - -2.39 - -4.21 - -2.68 -3.01 - 0.96 -2.5 - - - - -1.68 -0.78
Zm00001d019373 (GRMZM5G805697)
- - - -1.11 -3.59 - - - - - - -6.87 - - - -5.21 - 4.3 3.88 -0.53 - -2.26 - - - - - - - - -1.23 -1.15 -5.77 -2.86 -5.33 - -
Zm00001d020346 (GRMZM2G150832)
- - - - -3.72 - - - - - - -8.44 - - - -4.28 - 3.61 4.57 - - - -0.57 - - - - - - - -2.68 - - - - - -
Zm00001d020875 (GRMZM2G078779)
- - - - -7.81 -10.58 -12.46 - - - - -9.24 - -7.52 -12.59 -5.4 -7.63 3.18 4.74 -6.01 -4.17 -2.43 - -13.24 -5.56 -10.13 -5.89 -7.06 -6.1 - -0.51 - -2.32 -6.06 - -8.53 -8.14
Zm00001d021357 (GRMZM2G058208)
-1.27 - 0.07 - -0.83 -5.63 - - - - -4.39 -2.99 -1.66 -2.81 -4.43 -3.38 - 4.02 4.04 -3.59 -5.86 -2.71 -2.81 - -5.35 -2.09 - -4.4 - -2.6 -3.69 - -5.49 -4.74 -3.34 -1.69 -4.94
Zm00001d024286 (GRMZM2G079965)
- - - - -12.8 -5.66 - - - - -3.95 -4.29 - - - -4.38 -5.66 3.79 4.42 -1.53 - - - - -7.25 -4.12 - - -0.1 - -3.67 - - - -8.81 -5.09 -5.97
Zm00001d024915 (GRMZM2G077951)
- - - - - - - - - - - -3.6 - - - -4.01 - 3.42 4.46 -0.75 - - - - - - - - - 1.38 - - -0.6 - - - -1.97
Zm00001d025871 (GRMZM2G005284)
-0.8 -0.81 -1.05 - -1.01 - -4.19 -3.88 - - - -1.53 - - -3.25 -1.6 -1.72 1.64 4.05 -2.58 0.47 -0.75 1.18 -1.66 0.72 -2.43 - 0.73 2.04 - -3.06 - -4.85 -0.93 -3.49 -2.37 -0.71
Zm00001d027490 (GRMZM2G008122)
- - - - - - - - - - - -0.97 - - -5.72 -2.22 - 4.15 3.77 0.66 -3.18 -2.16 - - -5.11 - - - 1.48 - - - - - - -6.11 -2.77
Zm00001d027496 (GRMZM2G137374)
- - - - -4.4 - - 1.51 - - - -4.45 - - -3.72 -0.99 -0.58 2.99 2.73 1.37 -1.69 - 3.78 - - - 0.36 -2.33 - - - - -4.26 - -3.94 - -
Zm00001d029341 (GRMZM2G100452)
-7.65 -4.93 -7.5 - -1.44 -7.95 -5.98 -8.1 -5.51 -6.08 -5.31 -2.68 - - -3.01 -5.39 -2.95 4.04 3.68 -2.56 -1.82 -0.51 - -1.64 -2.64 -4.66 0.51 -1.04 - -1.18 -4.43 -0.4 0.04 -0.38 -4.34 -3.34 -5.31
Zm00001d031312 (GRMZM2G113229)
- - -10.09 - -7.39 -7.64 - -5.53 - - - -7.28 - -7.98 -7.84 -4.7 -2.35 3.03 4.78 -10.17 -3.61 -1.83 - -4.97 -4.13 - -8.75 -5.89 -2.46 -2.0 -7.84 -4.98 -6.2 -6.68 -11.84 -4.57 -5.13
Zm00001d031855 (GRMZM2G148867)
-8.04 - -7.02 - -6.13 -7.01 -7.25 - - -7.02 - -4.56 -2.38 -4.76 -2.72 -4.54 -5.27 3.5 4.25 -8.4 -5.53 - -8.07 -5.26 -3.68 -8.22 -4.66 -2.97 2.29 -4.37 -5.15 -0.94 -5.43 -3.35 -5.95 -2.47 -4.71
- - - - - - - - - - - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - -
-0.22 - - - 2.01 - - -0.25 - - 0.48 -1.12 - - - -0.43 - 2.39 4.26 -2.16 -0.97 - 1.5 - -0.82 - - - - - - - -3.38 - - -3.6 -
- - - - - - - - - - - -7.28 - - - -5.79 - 3.28 4.32 -5.78 -3.88 - - - - - - 0.45 - - - 1.03 1.78 -1.9 - -9.29 -6.26
Zm00001d039845 (GRMZM2G162622)
- - -7.97 - -6.86 -7.57 -5.93 1.18 - -7.2 - -6.23 - - -5.71 -4.62 - 3.6 4.33 - -8.08 -0.51 - - - - - -3.28 0.44 - - - -2.2 -5.24 -8.5 -8.03 -
Zm00001d039875 (GRMZM2G384128)
-4.81 - -2.72 -0.74 -4.11 -1.22 -1.76 - -0.15 -2.89 -1.8 -2.07 - - -2.05 -3.03 - 2.63 3.66 1.56 -3.53 -2.22 - - -4.54 - - -0.58 - - 0.56 2.86 -3.88 0.42 -4.85 -1.0 -3.51
Zm00001d040502 (GRMZM2G085504)
- - - - -2.85 -0.71 0.72 -0.05 - - - -0.26 -1.33 - -0.49 -2.84 - 3.36 3.7 1.52 0.4 - - - - - - -3.41 - - - 1.31 -3.76 - -6.65 0.45 -3.61
- - - - - - - - - - - 0.18 - - - - - - 5.16 - - - - - - - - - - - - - - - - - -
Zm00001d043393 (GRMZM2G162238)
-3.66 - -1.91 - -2.56 -6.75 - - - - - -3.33 - -2.08 -3.84 -3.23 - 3.67 4.28 -2.36 -7.47 - - -5.57 -5.43 - -3.07 -5.27 - - 1.17 - -1.79 -3.81 -8.3 -3.49 -0.54
Zm00001d044245 (GRMZM2G022440)
-1.97 -3.55 - - -5.96 -1.76 - - - - - -7.19 - - -9.82 -4.58 - 4.44 3.77 -0.56 - -4.4 - - - - - -5.05 - - - - -8.67 -8.4 - -6.83 -2.02
Zm00001d044374 (GRMZM2G122762)
- - - - -7.24 -0.67 -0.61 0.52 -0.97 -0.51 -6.65 -2.31 -5.81 -5.67 -4.75 -2.85 - 4.21 3.65 -1.44 -7.73 -0.81 -1.33 -9.89 -7.59 -2.85 - -4.43 - - -8.92 -4.95 -8.09 -5.88 -10.22 -4.2 -7.35
Zm00001d046143 (GRMZM2G040236)
- - - - -2.81 - -2.3 - - - - -2.44 - - - -4.04 - 3.15 4.62 - -3.43 - - - - - - -0.87 - - - - 0.93 - - -1.69 -
Zm00001d046772 (GRMZM2G146523)
- - - -1.56 -8.45 - - -3.11 - -4.7 - -5.23 - -2.95 -7.83 -4.07 - 3.81 4.33 -0.78 -1.83 -2.71 - -4.14 -3.37 - - -2.6 - -1.65 -2.15 - -3.73 - - -6.34 -2.67
Zm00001d047417 (GRMZM2G148969)
- - - - -6.75 - - - - -7.14 -4.27 -6.85 - -6.18 -7.98 -4.85 - 4.29 3.99 -4.7 - -3.57 -1.19 - - - - -1.97 -1.51 - - - -4.4 -4.5 -5.93 -9.08 -4.7
Zm00001d049393 (GRMZM2G012251)
- - - - - - - - - - - -6.36 - - - -5.42 - 3.91 4.25 -1.11 - - - - -0.29 0.39 - -3.02 - - - - -3.81 -4.09 - - -
Zm00001d050303 (GRMZM2G103186)
-0.32 - - - 0.14 - - - - - - -3.43 - - -3.51 -2.63 - 3.44 3.86 -1.26 - - - - - - 1.24 -1.83 - - -3.45 2.53 -1.77 -3.74 - -3.32 -
Zm00001d050603 (GRMZM2G043460)
-7.46 - - - -7.44 - - - - - - - - - -8.23 -4.19 - 2.19 5.02 -9.82 - - - - - - - - - - - - -9.07 - - - -
Zm00001d051696 (GRMZM2G124667)
- - - - - - - - - - - -7.12 - - - -6.52 -3.83 4.46 3.74 -0.25 - -0.73 - -5.73 - - - - - - - - - - - - -
Zm00001d052158 (GRMZM2G356046)
- - - - -6.06 - - - - - - -6.12 - - - -4.06 - 2.82 4.79 -6.21 -2.13 - - - - - 0.76 -2.83 - - - - - - - -3.31 -3.64
Zm00001d052592 (GRMZM2G094716)
-3.14 - - - -6.13 - - - - - - - - - - -5.4 - 4.0 4.21 -2.78 -6.48 -2.71 - - - - - -7.45 0.93 - - - -6.27 -6.66 -7.99 -7.49 -
Zm00001d052966 (GRMZM2G076858)
- -1.93 - - -2.41 - - - - - - -3.6 - -1.33 -1.36 -2.75 - 3.55 4.21 -1.03 - - - - - - - -0.45 - - - 1.67 -4.72 -2.33 -5.19 - -0.54
Zm00001d053216 (GRMZM2G163801)
- - - - - - - - - - - -3.3 - - - -3.82 - 3.7 4.5 0.22 - - - - - - - - - - - - - - - - -
Zm00001d053599 (GRMZM2G078862)
- - - - - - - - - - - -9.35 - - -8.84 -4.59 - 4.2 4.19 - - -1.6 - - - - - -6.27 - - - - -9.03 -7.14 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.