Heatmap: Cluster_66 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d003168 (GRMZM2G135018)
-5.99 -4.29 -2.55 -2.71 -2.96 -3.22 -4.21 -3.45 - -4.86 -1.38 -3.56 - -1.81 -3.84 -1.53 -2.14 -0.48 -2.57 -6.66 -2.06 -0.73 - 0.09 -1.77 - -1.89 0.6 - 4.86 -2.08 - -2.7 -2.17 -4.32 -2.63 -2.98
Zm00001d004105 (GRMZM2G015859)
- -5.02 - -0.78 -1.74 -1.33 -4.57 - - -4.89 -3.51 -3.29 - -0.97 -4.71 -1.61 -0.87 -0.63 -0.5 - -1.46 -1.32 - -0.89 -5.12 -3.29 - -2.88 - 4.53 -1.99 - -2.42 -5.69 2.86 -3.57 -2.22
-2.71 -1.03 -0.51 - -1.32 -4.23 - 0.0 -1.89 -1.35 -2.06 -1.75 -2.32 - -1.59 0.02 -0.85 -0.53 0.01 -7.06 1.65 -0.54 -1.15 -0.04 -0.81 -1.71 -0.78 -1.17 - 4.22 0.56 - -0.72 -0.74 -2.49 -0.88 -
- - - - -2.13 -1.83 -4.83 - - - -0.0 -3.57 - - - -0.91 - - -0.48 -3.44 - - 1.05 - -10.81 1.15 - - - 4.74 1.48 - -3.1 - - -5.53 -7.91
Zm00001d007101 (GRMZM2G030194)
- - - -1.02 -4.7 - -4.9 -1.39 - - - -3.05 - -1.67 - -1.94 - - -3.54 -6.51 - - - -4.84 - 0.42 - -2.28 2.47 4.55 1.79 - -2.77 - -2.78 -4.54 -0.04
- - - - -3.17 0.23 - 0.04 - - -2.85 -1.28 - - - -2.79 -2.85 - -0.21 - -2.52 -2.87 - - -6.38 -1.67 - -2.01 - 4.93 -1.58 - -4.79 - 0.08 -2.74 -5.1
- - - - -6.45 - - - - - - -2.72 - - - -4.06 - - - - -3.36 - - - - - - - - 5.14 - - - -0.86 - -0.15 -
- - - - -1.58 2.95 0.42 - - - - 0.02 - - - -1.52 1.44 - 2.09 - - - - - -0.41 - - - - 4.12 - - - - - 0.21 -
- - -6.63 - -3.36 - - - - - - -8.6 - - -8.0 -2.06 - - -7.05 -8.81 - - 1.0 - - - - -3.72 -0.81 5.03 -2.24 -0.07 -3.1 -3.39 -9.51 -8.63 -
-5.9 -1.58 -1.28 2.47 -1.95 -2.2 -1.69 -0.75 -3.27 -3.09 -1.37 -2.08 -1.5 -0.31 -1.76 -0.02 0.59 -1.07 0.18 -3.48 -0.56 -1.26 -2.23 -1.16 -2.04 -1.28 -1.43 -1.53 - 4.08 -0.66 - -1.96 -0.59 -1.06 -1.05 -1.78
- - - - -3.19 - - 0.69 - - - -3.03 - - - -2.39 - - -0.71 -1.56 - - - - -0.53 - - - - 5.04 - - - - - -1.55 -
- - - - -3.88 - - - - - - -2.76 - - - -2.49 - - -0.21 - - - - -1.57 -2.94 - - - - 5.09 - - -3.99 - -1.07 - -0.66
Zm00001d013063 (GRMZM2G123063)
- - - -0.7 -2.79 -3.03 -7.28 -5.82 - - -6.61 -5.49 - -0.15 -8.72 -1.42 -4.52 1.17 1.18 -6.57 1.07 0.46 - -1.15 -1.27 -2.43 -6.19 0.21 - 4.57 -4.13 - -4.82 -1.09 -8.18 -6.13 -2.32
Zm00001d013525 (GRMZM2G379348)
- - - - -8.64 - - - - - - - - - - -8.1 - - - - - - - - - - - - - 4.87 2.95 - - - - - -
- - - - -4.55 0.32 - - - - - -3.04 - - - -3.48 - - - -2.75 0.38 - - - - - - - - 4.95 -0.89 - - - -2.47 -0.78 0.8
Zm00001d014117 (GRMZM2G046438)
- - - -4.07 -6.65 - -7.9 -5.6 - - - -7.72 - - - -3.96 -1.84 -2.16 -1.55 - -0.72 -1.29 - -0.26 -0.07 3.06 -2.98 1.11 - 4.41 -3.07 -1.79 -5.42 -0.18 -5.6 -5.57 -6.2
- - - - - - - - - - - -2.48 - - - -0.48 - - 0.99 - - - - - - - - - - 4.94 1.43 - -0.3 - - - -
Zm00001d015381 (GRMZM2G130382)
-7.86 -9.36 -5.69 - -6.91 -9.19 - - - - - -9.62 - - -12.24 -7.02 - - -8.57 -8.71 -3.21 -2.25 -4.8 - -1.12 - -9.22 1.97 1.82 4.71 - -1.2 -3.49 0.96 -10.65 -13.02 -9.48
Zm00001d016235 (GRMZM5G899985)
- - - 1.72 -1.17 -1.71 - - - - - -5.32 - - - -0.68 -1.39 - 0.08 - - - -1.08 - - - - -2.15 - 4.72 1.71 - -5.87 - -5.08 -1.8 -1.97
- - -1.24 - - - - - - - 0.9 -6.64 - - - -1.68 - - - -5.35 - - - - - - 0.81 -4.83 - 4.92 0.68 - -1.32 -2.06 - - -
- - -1.43 - -7.26 - - - - - 1.13 -3.16 - - - -0.46 - - - - - - - - - - 0.01 - - 4.93 -0.38 - 0.06 -2.28 - - -
- - -4.86 1.76 -1.19 -1.41 - -2.7 - - - -3.16 - 0.56 -1.6 -0.35 - - -0.26 -6.2 - - - - - -1.61 -2.2 -1.58 - 4.57 0.45 - -2.55 - 1.51 -7.55 -
Zm00001d017903 (GRMZM2G494600)
- - - - -1.74 - - - - - - -2.82 - - - -1.18 - - -0.92 -1.11 - - - - - - - - - 5.07 -0.47 - - - -0.21 - -
Zm00001d018000 (GRMZM2G331474)
- - - - - - - - - - - - - - - -2.96 - - - - -1.78 - - - - - - - - 5.01 1.63 - - - -3.12 - 0.15
Zm00001d018091 (GRMZM2G062142)
- - -3.33 -3.94 -5.37 -6.12 -7.82 - - - - -4.84 - - - -2.29 -7.07 - -1.7 - - - - - - - -1.42 -3.09 - 5.06 1.2 - -7.85 - -4.79 -9.58 -3.89
Zm00001d018340 (GRMZM2G080843)
-3.91 -1.73 -5.79 -1.26 -2.43 -6.26 -2.87 -5.31 -7.61 -8.76 -3.39 -2.86 -6.72 -6.0 -5.01 -5.73 -4.7 -0.4 1.1 -4.64 -7.14 -3.54 - -4.1 0.42 - -4.86 1.04 - 4.68 -0.13 -3.97 -0.94 0.67 -5.19 -2.22 -3.99
- - - - - 0.88 - - - - - -2.14 - - - -1.62 - - - -0.86 - - - 2.06 - - - - - 4.52 - - - - - -1.29 2.71
- - - - -10.27 - - -4.85 - - - -10.55 - - - -10.95 -3.81 - - -8.27 -0.77 - - - -5.81 0.31 - 2.05 - 4.94 - - -2.61 -5.45 - - -7.46
Zm00001d019380 (GRMZM5G821968)
- - - - -5.72 - - -2.22 - - -3.05 -4.41 1.58 - - -2.43 -1.92 -1.09 1.24 -3.71 -0.73 -1.7 - 0.37 -1.97 -0.62 - 0.86 - 4.6 -3.94 - -1.09 -0.86 - -8.26 -
- - - - -1.74 - - - - - - 0.15 - - - -3.14 - - - -0.24 - - - - - - - - - 5.11 - - - - - - -
-5.47 -2.86 -3.86 - -2.24 - -5.14 -3.3 - -3.09 - -4.19 - - -7.67 -1.74 - -2.01 -4.1 -5.98 2.56 - 3.22 -3.4 -3.62 - - -5.87 - 4.32 -5.21 - -3.82 -5.15 -7.62 -4.15 -4.35
- - -6.18 - -1.63 - 0.37 -1.86 - - -1.01 -1.79 - 0.4 -8.7 -0.7 - - -1.83 -9.03 -0.8 -0.78 -0.24 -7.23 -5.58 0.29 - -6.78 - 4.73 0.28 - -1.72 -3.48 -9.75 -5.7 -0.5
- - - - -4.32 -0.48 -1.12 - - - - -3.46 - - - -1.14 -0.15 - -3.59 - -3.72 2.26 - - -3.5 - - -1.24 - 4.77 -1.48 - - - -1.88 -2.0 -0.76
- - - - - 0.29 - - - - - -1.08 - - - -1.96 - 1.68 1.09 0.64 - - - - - - - - - 4.6 1.79 - - - - -1.18 -
- -0.3 -0.37 - - - 0.1 - - - - -3.53 - - - -1.68 2.02 - -1.23 - - - - - - - - - - 4.83 - - - - -0.09 - -
Zm00001d024444 (GRMZM2G107616)
-1.94 -1.14 -0.91 1.42 -1.97 -0.75 -3.99 - - - - -1.76 - - -1.2 -0.74 0.36 0.76 0.55 -5.8 -0.1 2.0 - 0.87 0.39 - - -0.1 - 3.78 -0.86 - -4.8 -2.29 0.59 -1.4 -0.05
- - - - -2.73 -1.52 - - - - -2.24 -5.65 - - - -2.27 - - -4.34 -4.25 - - - - - - - -3.06 - 5.11 -0.14 - -4.77 - -5.07 -1.16 -
Zm00001d024902 (GRMZM2G048697)
- - - - - - - - - - - -2.4 - - - -5.24 - 0.25 0.15 - - 0.67 - - - - - 1.53 - 4.89 - - -2.89 -1.66 - - -
- - - - -5.51 -5.28 - - - - - -5.86 - - - -3.71 - - -5.14 - - 2.17 - - -3.62 - - - - 4.99 -4.47 - - - -2.6 -2.55 -
- -5.58 - - -5.26 -5.74 - - - - - -5.71 - - -4.69 -4.95 -5.44 - -4.43 - -4.63 - - - - - - -8.4 - 5.08 1.23 - - - - -4.71 -1.23
Zm00001d028204 (GRMZM2G395121)
-5.09 -3.17 -1.31 -1.67 -2.24 -3.8 -2.7 -1.45 -1.99 -2.09 -1.88 -2.08 -1.69 -0.54 -2.7 -0.9 0.96 0.04 1.01 -5.87 0.17 -0.24 -2.27 0.12 -0.55 1.9 -1.48 0.89 -2.62 3.81 -1.08 -1.44 -0.34 0.1 -2.24 -1.59 -1.9
- - - 1.79 -2.07 - -1.66 - - - - -3.25 - - - -2.82 - - -3.58 - - 0.51 - - - - - - - 4.94 - - - - - -3.65 -1.31
- - - - -3.31 -1.17 - - - - - -0.61 - - -0.81 -1.47 -2.99 - -1.52 - -2.84 -0.16 1.44 - - -0.81 - -5.83 - 4.83 -0.64 - -6.6 - -2.28 -0.65 -2.22
- - - - -1.73 -2.45 - - - - - -4.12 - - - -1.4 - - - - - - - - - - - - - 5.12 0.31 - - - - - -
Zm00001d030001 (GRMZM2G444715)
- - - - - - 1.06 - - - - -0.43 - - - -0.1 1.8 - 0.09 - - - - - - - - - - 4.8 - - - - -0.28 - -
Zm00001d030914 (GRMZM2G335438)
- - -5.93 - -4.1 - -6.33 - - - -2.84 -1.13 - - -0.89 -0.85 - 0.04 -0.53 -1.03 -2.59 - 1.29 -7.41 - - -3.26 -2.46 - 4.68 1.4 - -0.26 -3.08 -3.89 -0.4 -
Zm00001d032015 (GRMZM2G373447)
- - - - -1.41 - - - - - - - - - - -4.08 - - - - - - - - - - - - - 5.15 - - -0.87 - - -1.07 -
- - - - -2.72 -2.0 - -0.8 - - -0.64 -0.73 - -2.33 -5.1 0.27 - -5.03 - -5.15 -2.08 - - - -5.77 - - -0.24 - 4.77 2.0 - -2.21 - -5.36 -3.07 -0.68
- - - - - - - - - - - -2.7 - - - -4.65 - - - - - 1.95 - - - - - - - 5.01 - - - - -0.68 - -
- -3.31 -0.54 - -3.21 - - - - - - -1.76 - - -2.52 -4.28 -0.17 -0.72 -3.84 -5.85 - - - -1.86 -3.37 - 0.84 -4.67 - 4.83 0.88 - -6.02 -0.31 -2.91 -0.9 -
-2.37 -6.88 -4.52 1.19 -1.75 -0.02 0.12 -1.1 -3.55 -4.54 -2.46 -0.84 -2.78 - -3.07 -0.91 -0.5 0.57 -0.55 -0.66 -1.42 0.33 -1.08 0.53 0.45 -4.11 -1.35 -0.73 -0.27 4.06 -0.33 -0.05 -1.51 -4.1 -3.33 -1.59 -1.2
- - - - - - - - - - - -2.17 - - - -2.04 - - - - - - - - 0.22 - - - - 5.01 1.5 - - - -2.43 -3.57 -
- - - - - -0.53 - - - - - -8.21 - - - -8.28 - - - - - - - - - - - - - 5.18 - - - - - - -
Zm00001d034116 (GRMZM2G159715)
- - -2.72 - -1.88 -6.05 1.97 -5.07 - - -2.86 -3.36 - 2.09 -9.35 -1.12 -2.15 - -2.35 -5.12 1.01 -3.12 - -4.61 -5.2 - -2.09 -2.45 - 4.5 0.42 - -5.58 -7.28 -5.44 -4.31 -1.1
- - - - -2.48 - - - - - - -4.6 - - - -3.34 - - - - - - - - - - - - - 5.19 - - - - -3.91 -2.18 -
- - - - - - -0.52 - - - - -2.86 - - - -4.44 -1.03 - - -4.98 - - 2.81 - - - - - - 4.83 - - - -4.13 - - -
- - - - -2.76 -0.31 - - - - - -0.89 - - - -5.92 - - - - - - - - - - - -0.27 - 5.01 1.07 - - - -1.51 - -
Zm00001d035490 (GRMZM2G101662)
- - - - -1.58 - 1.87 - - - - -4.4 - -2.77 - -1.25 - - - - 0.5 - - - - - - - - 4.84 1.14 - - - - - -2.35
- -5.32 -2.22 - -3.12 -2.09 -5.84 - - - - -3.83 - - -8.76 -0.39 -5.61 -2.16 -0.05 -3.33 1.81 -0.48 - - -6.16 - -1.51 -4.17 - 4.78 0.4 - -2.16 -6.7 -8.27 -0.89 -
- - - 2.22 -3.52 -1.11 -3.93 - - - - -5.86 - - - -1.57 -4.13 - -0.26 - -0.96 - 2.81 - - - - -2.92 - 4.44 -1.29 - -3.43 - -1.74 -1.48 -
Zm00001d036993 (GRMZM2G050917)
- - -4.63 - -2.03 - -0.28 - - - - -1.28 - -0.78 -9.51 -0.14 -6.3 -3.13 0.99 -6.57 -0.81 1.1 -0.94 - -4.7 - -5.37 -6.63 - 4.8 -1.15 - -2.83 -5.07 - -7.65 -5.39
- - - - -3.88 - - - - - - -3.47 - - - -2.12 1.56 - - - - - - - - - - - - 5.02 -0.53 - - - - -1.17 -
- - -2.25 - -1.78 - -3.06 - - - - -2.09 - - - -0.15 - - 1.16 - -0.41 - - -2.29 - -0.81 -1.4 - - 4.8 0.95 - -2.3 - - -5.31 0.12
- - - 1.97 -2.4 0.52 -1.79 - - - - -1.54 - - -3.42 -3.12 1.33 -0.37 -1.08 -6.1 -3.02 2.07 - 0.36 -0.35 -0.75 - -5.07 - 4.23 -1.02 - - -4.61 -2.38 -1.47 -
- - -0.66 - -2.03 -6.59 - - - - 0.51 -2.25 - - - -0.48 -6.97 - -9.9 - -9.89 0.46 -1.12 - -5.08 -5.14 0.69 -8.75 - 4.75 1.63 - -1.78 - -11.21 -10.92 -7.94
- - - - -3.51 - - - - - 0.62 -4.38 - - - -3.01 - - -0.52 - -2.62 - - - - - - - - 4.68 2.86 - 0.52 - - - -
- - - - -2.34 -3.22 - - - - - -2.1 - - -4.09 -2.6 -1.11 - -2.53 - -3.66 3.24 - -3.6 - - - -4.72 - 4.59 - - - - -1.05 -1.56 0.07
- - -2.45 -1.39 0.6 -2.48 2.11 -6.51 - - -2.31 -1.26 - 1.27 -3.53 0.28 -1.5 -5.48 -1.28 -2.22 -0.71 -0.91 - - -2.4 1.16 -5.05 -1.94 - 4.31 -2.91 - -3.01 -4.76 -2.65 -1.58 -0.89
Zm00001d041587 (GRMZM2G137289)
- - - - -5.18 - - - - - - -5.08 - - - -5.7 - - -3.35 - - - - -1.64 -3.71 - - -4.06 3.44 4.65 - - -3.71 -2.05 - -5.46 -
Zm00001d042598 (GRMZM2G155532)
-0.14 -0.71 -0.55 -0.04 -0.39 -1.29 -1.89 -1.35 -0.98 -0.86 -2.77 -1.41 -2.28 -0.09 -0.6 -0.94 -1.64 0.82 0.48 -7.69 -1.09 -0.92 -1.94 -1.25 -1.0 1.45 -0.36 0.55 -2.31 3.47 -0.49 -3.2 -1.21 0.44 -0.09 0.46 0.3
- - - - -2.3 0.48 - - - - -0.4 -1.02 - -0.67 - -3.15 -2.61 -1.41 -0.42 - -1.68 - - - - - - -3.1 - 4.77 0.08 - -4.12 - 0.22 -2.69 0.91
Zm00001d044326 (GRMZM2G082026)
- - -1.52 - -3.74 -0.57 -0.41 - - - -0.93 -3.35 - - -5.5 -2.0 0.35 - -2.76 -6.29 -0.43 0.54 - - -0.68 - -1.92 - - 4.85 -3.43 - -4.46 - -2.1 -2.24 -1.74
Zm00001d044543 (GRMZM2G065958)
- - - - -0.77 -1.65 - - - - - -1.62 - - - -2.61 - - -3.35 - -3.96 - - - -2.06 - - - - 5.04 1.27 - - - - - -
Zm00001d044661 (GRMZM2G054610)
- - - - - - - - - - - - - - - -8.18 - - -2.97 - - - - - - - - - - 5.15 0.4 - - - - - -
Zm00001d044714 (GRMZM2G389299)
- - - - -1.48 -3.91 - - - - - -8.22 - - - -2.9 - - -4.58 -3.92 3.17 - - - - - - -3.51 - 4.44 2.22 - -0.2 -5.7 - -7.48 -
- - - 2.63 -4.03 -1.22 - - - - - -2.64 - - - -4.48 - - -0.65 - - 2.5 - - -3.52 -1.27 - -5.94 - 4.54 - - - - -5.05 -4.6 -
- - - - -4.7 - - - - - - - - - - -8.09 - - - - - - - - - - - 0.06 - 5.06 1.35 - - - - - -
Zm00001d046172 (GRMZM5G821869)
- - - - - -6.39 -3.7 - -7.07 -4.93 - -3.25 - - -8.48 -1.68 - - -8.94 - -0.64 - -0.85 - - - -3.99 0.17 - 4.92 0.15 -0.98 0.08 0.01 -7.03 -6.35 -
Zm00001d047430 (GRMZM2G416791)
- - - - -2.26 - - - - - - -1.77 - - - -1.81 - - - - - - - - - - - -0.2 - 4.71 2.77 - - 1.29 - - -
- - -1.81 - - - - - - - - - - - - -1.37 - - - - -3.73 - - - - - - 1.95 - 4.26 0.12 2.81 1.37 0.88 - - -0.59
- - - - -3.53 - - - - - - -1.64 - - - -2.48 - -4.04 -0.63 -5.47 - - 2.9 - -4.97 - - - - 4.75 -1.55 - - - - -0.19 -
Zm00001d051324 (GRMZM2G178435)
- - - - - - -5.64 -5.48 -3.89 -4.04 - -6.57 - - - -7.11 0.95 -0.92 -2.27 - -2.15 - - -5.34 -2.61 0.03 -0.52 1.15 - 4.76 -4.34 0.14 -1.32 0.18 - -4.84 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.