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Heatmap: Cluster_80 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
1.58 0.42 -4.47 -4.37 -0.77
Ppi_g03906 (RCD3)
 1.08 0.36 -0.38 -0.74 -2.04
1.83 0.18 -2.67 - -2.75
Ppi_g04422 (HB-4)
 0.93 0.38 -0.84 -0.38 -1.14
1.3 0.76 -1.39 -2.22 -1.97
1.16 0.69 -1.33 -1.23 -1.63
Ppi_g06039 (SSADH)
 1.47 0.22 -1.53 -2.78 -0.8
1.82 0.57 - - -
1.49 0.65 -1.51 -1.95 -
0.61 0.38 -0.22 -0.65 -0.56
1.5 -0.46 -1.08 -1.98 -0.49
1.72 0.61 -2.56 - -
1.75 0.56 -3.6 -3.85 -8.16
1.82 -0.15 -2.44 -3.2 -1.87
1.34 1.3 -6.84 -10.27 -9.03
1.34 0.3 -1.17 -1.48 -1.2
1.97 -0.29 -3.53 -3.54 -3.6
2.06 -0.56 - -3.33 -4.25
1.58 0.5 -3.67 -1.39 -2.75
1.21 0.63 -1.66 -1.25 -1.29
1.3 1.06 -2.44 -2.01 -5.17
1.73 0.68 -3.72 - -
1.6 0.65 -4.41 -1.88 -3.84
1.98 -0.92 -4.93 -3.9 -1.2
1.87 -0.36 -2.3 -2.08 -2.87
Ppi_g14199 (CYTC-1)
 1.59 0.41 - -2.33 -1.11
Ppi_g14340 (SIS7)
 1.47 0.36 -1.02 -1.6 -2.95
1.2 0.01 -0.36 -0.81 -1.53
1.14 0.63 -0.96 -0.9 -2.39
1.48 0.35 -2.14 -0.76 -3.0
1.73 0.5 -4.56 -2.48 -4.74
1.54 0.94 -3.65 -4.35 -4.31
1.62 0.84 -3.29 - -5.14
1.66 -0.21 -4.13 -1.48 -0.82
1.23 0.89 -0.63 -2.62 -
1.68 0.33 -2.84 -2.02 -2.78
2.02 -0.4 -3.37 - -3.45
1.91 -0.71 -2.5 -2.67 -1.79
Ppi_g18836 (DOX1)
 1.37 0.91 -1.2 -3.43 -6.54
2.09 -0.41 - - -
1.55 0.94 - -2.57 -
1.58 0.86 - -2.48 -
1.93 -0.39 -2.51 -3.24 -2.91
Ppi_g22256 (KP1)
 0.66 0.41 -0.62 -0.35 -0.61
1.09 0.29 -0.53 -1.02 -1.13
1.89 -0.23 -3.34 -2.02 -3.27
1.58 0.31 -0.88 -3.32 -3.07
Ppi_g30153 (PSY)
 0.95 0.55 -0.79 -0.93 -1.0
Ppi_g30771 (NDH-M)
 1.26 1.0 -2.47 -2.04 -2.54
0.99 0.22 -1.07 -0.68 -0.41
Ppi_g33590 (STH2)
 1.33 0.42 -0.7 -1.07 -4.37
2.18 -2.06 - -2.7 -3.64
1.39 1.08 -3.04 -3.74 -3.73
1.76 -1.44 -2.32 -1.63 -0.47
1.45 0.02 -0.1 -2.94 -2.35
1.02 0.53 -0.38 -1.19 -1.64
2.0 -1.88 - - -0.48
1.07 0.62 -1.07 -1.26 -1.08
1.22 0.47 -0.98 -0.56 -3.31
1.85 -0.81 - - -0.26
1.93 -0.46 -3.08 -3.03 -2.18
1.85 -0.47 - -1.93 -1.27
1.96 -0.15 - - -2.3
1.97 -1.47 -2.89 -1.9 -1.6
1.84 -1.07 -1.23 -1.95 -1.89
1.92 0.05 - - -2.54
2.26 -4.09 -3.22 -4.23 -
1.9 -0.57 -2.83 -2.95 -1.63
1.54 0.52 -1.63 -1.56 -
2.03 -1.26 -2.34 - -1.77
1.26 0.19 0.21 -2.67 -2.71
1.68 0.53 -2.5 -2.73 -5.04
1.32 0.54 -0.86 -1.13 -5.17
Ppi_g53714 (FDH)
 1.45 -0.18 -1.47 -2.81 -0.19
Ppi_g53779 (CSI1)
 1.62 0.67 -2.62 -2.44 -
1.55 -0.42 -1.56 -1.76 -0.54
2.05 -1.21 -1.97 -2.73 -5.06
2.08 -1.99 - -0.92 -
2.32 - - - -
0.95 0.87 -0.41 -1.55 -2.78
2.07 -1.8 -2.52 -2.54 -2.59
2.17 -1.91 -2.09 - -
1.35 0.68 -1.79 - -0.87
1.86 0.46 - - -
2.11 -0.58 - - -
1.87 -0.76 - -0.79 -2.49
2.28 -2.73 - - -
1.77 0.48 - - -2.33
Ppi_g54716 (PGP3)
 1.61 -0.76 -0.92 -2.66 -0.58
1.75 -0.67 -1.38 -0.68 -
2.03 -1.34 -2.58 -3.87 -1.78
1.22 0.38 -1.36 -1.06 -0.98
2.06 -0.71 - -2.23 -
Ppi_g55227 (HWI1)
 1.5 0.75 -2.31 -4.4 -2.07
1.14 -0.17 -0.95 -0.48 -0.59
1.63 0.9 -6.85 -5.08 -
2.25 -2.03 - - -
2.19 -1.24 - - -
1.84 -0.16 -2.41 -4.07 -1.91
1.92 -0.27 -3.02 -4.76 -2.1
2.08 -0.39 - - -
1.85 -0.3 -0.78 - -
2.07 -1.31 -5.16 -1.8 -3.65
2.08 -1.2 - -2.53 -2.55
1.62 0.26 -1.39 -1.64 -5.46
2.1 -0.46 - - -
1.47 1.14 -5.05 - -
2.32 - - - -
2.32 - - - -
1.9 -0.76 -2.2 -2.49 -1.86
1.54 0.92 -3.22 - -3.3
1.22 0.16 -0.8 -1.21 -0.86
1.49 0.87 -2.87 -2.6 -4.06
1.8 0.14 -1.35 - -4.89
1.21 0.84 -1.63 -0.79 -
1.73 -0.64 -2.38 -1.36 -1.13
1.72 0.16 -1.73 -2.85 -2.64
1.4 -0.01 -0.08 -1.3 -5.95
1.43 0.97 -2.39 -3.06 -4.92
2.2 -2.37 -3.16 - -3.24
Ppi_g57627 (PDR6)
 1.53 0.8 -2.27 -2.64 -8.16
2.15 -2.03 -4.47 -4.44 -2.23
2.08 -0.63 -4.45 -3.9 -
1.85 -1.11 -3.23 -2.34 -0.65
1.84 -0.48 -2.2 -1.02 -
2.05 -1.34 -1.09 - -
1.91 -0.59 -3.09 -2.59 -1.76
2.05 -0.6 -2.29 - -
2.01 -0.04 - - -
2.32 - - - -
1.59 0.66 -1.54 -3.81 -
1.89 -0.01 -1.71 - -
1.88 -0.41 -2.26 -4.14 -1.71
1.54 -1.32 -0.27 -0.66 -2.1
1.37 0.62 -0.98 - -1.43
1.59 0.79 -2.52 -4.15 -4.76
2.07 -1.65 -2.7 -2.03 -3.77
1.48 0.06 -0.97 -0.99 -2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.