Heatmap: Cluster_173 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d001842 (GRMZM2G436214)
-1.33 -0.17 -0.48 0.73 -0.44 - -4.16 -0.29 -4.08 -4.71 -2.94 -0.84 -0.08 -1.59 -1.08 -0.01 0.84 0.38 1.49 -7.08 0.73 1.72 -0.7 1.95 0.93 -0.38 -0.15 -0.41 - 1.68 0.1 0.56 -1.97 -0.81 0.03 -1.35 -0.91
Zm00001d001845 (GRMZM2G137566)
0.13 0.93 -0.36 0.38 -0.17 -4.39 -4.67 -0.32 -3.7 -4.44 -2.63 -1.61 1.09 -0.19 -1.07 0.29 0.83 0.62 0.27 -2.96 0.12 1.56 -4.43 1.63 0.28 -0.48 0.29 0.14 - 1.16 0.05 0.08 -0.46 -0.39 1.1 -1.14 -1.67
Zm00001d001869 (GRMZM2G145816)
-1.41 -0.15 -0.77 -0.29 -0.57 -1.78 -1.82 0.09 -3.12 -2.61 -1.23 -0.58 0.11 0.02 -1.29 -0.18 0.81 0.01 0.87 -0.27 -0.39 1.06 0.18 1.65 0.71 0.14 -0.55 -0.24 0.32 0.88 -0.15 0.13 0.15 0.11 1.07 -1.11 -0.68
Zm00001d001994 (GRMZM2G029113)
-1.46 -0.13 -1.03 0.29 -0.61 -1.59 -0.97 0.41 -1.45 -1.43 -1.7 -0.83 1.51 -0.42 -0.67 0.5 1.06 -0.1 -0.04 -0.25 1.15 1.31 -0.1 1.46 0.41 -1.03 -0.75 -0.32 - 0.42 0.02 -2.65 -1.31 -1.01 1.44 -0.67 -0.36
Zm00001d002968 (GRMZM2G474929)
-1.61 0.52 -0.3 0.59 0.05 -2.39 -7.25 0.06 -3.74 -3.77 -1.54 -1.1 -0.16 -0.02 -1.19 0.1 1.4 1.0 1.79 -2.31 -0.03 0.23 -3.62 1.89 0.46 0.1 0.34 -0.16 -0.89 1.49 -0.21 -2.73 -0.79 -0.84 0.05 -1.32 -1.01
Zm00001d004983 (GRMZM2G131820)
-1.67 0.96 0.33 -0.53 -0.45 -2.19 -2.18 -0.04 -0.88 -1.01 -0.82 -0.39 -0.43 -0.98 -0.52 -0.23 0.76 0.54 0.54 -4.9 -1.04 -0.03 -0.29 1.65 -0.29 0.21 -0.3 0.15 0.78 0.46 0.43 -1.2 -0.42 -0.31 1.85 -0.22 -0.65
Zm00001d006255 (GRMZM2G108981)
-1.68 0.83 -1.05 0.81 -0.59 -8.14 -5.71 0.6 -6.35 -5.69 -2.63 -1.58 0.9 -0.59 -1.52 -0.22 1.49 -0.05 -0.15 -5.97 0.76 1.06 -2.17 2.14 0.04 -0.78 -0.06 0.36 -0.9 1.58 0.39 -3.73 -0.18 -0.07 0.84 -1.47 -1.52
Zm00001d006822 (GRMZM2G021567)
-0.81 0.55 0.0 0.91 -0.22 -2.85 -2.47 -0.67 -1.94 -2.1 -2.65 -1.13 0.3 -0.81 -1.35 -0.06 0.69 -0.19 0.4 -4.65 -0.16 0.28 0.35 1.18 -0.64 1.06 -0.01 0.15 -2.4 1.29 0.27 -0.92 -0.74 -0.95 2.41 -1.1 -1.23
Zm00001d007100 (GRMZM2G030148)
-1.44 0.35 0.27 -0.28 -0.57 -4.55 -6.38 0.01 -3.75 -3.6 -0.58 -0.9 0.07 -0.45 -0.53 -0.17 0.65 0.73 0.18 -2.58 0.5 0.94 0.3 1.8 0.7 1.3 -0.06 -1.07 -0.09 0.84 0.59 - -1.03 -0.91 0.82 -0.24 -0.12
Zm00001d008327 (GRMZM2G044128)
-1.25 1.0 -1.17 1.57 -0.14 -6.88 -3.11 0.48 -3.67 -3.55 -3.32 -1.75 0.83 -0.38 -0.73 -0.39 1.27 -0.3 -0.39 -7.21 0.91 0.49 -0.29 2.15 -0.34 -2.24 -0.51 -0.4 -1.79 0.49 0.3 -1.76 -0.9 -0.77 2.08 -1.45 -1.55
Zm00001d009391 (GRMZM2G167422)
-1.87 0.37 -0.04 0.42 -0.32 -2.9 -3.94 0.25 -3.48 -3.12 -1.39 -0.56 0.08 -0.26 -1.14 -0.05 1.03 0.05 0.67 -6.64 0.77 1.49 -4.56 1.81 0.24 -1.47 0.19 0.25 -0.1 1.59 0.81 -1.13 -0.52 -0.31 0.13 -0.99 -1.01
Zm00001d009517 (GRMZM2G083738)
-0.76 0.49 -0.48 0.44 -0.37 -3.0 -2.51 0.27 -2.37 -2.44 -2.08 -0.86 0.78 0.28 -0.6 0.05 0.72 -0.23 0.57 -4.97 0.4 0.21 -0.19 1.49 0.06 -0.19 -0.15 0.12 -0.36 1.18 0.57 -0.58 -0.48 -0.05 1.43 -0.98 -0.51
Zm00001d012606 (GRMZM2G139141)
-0.15 1.14 -0.5 0.28 -0.2 -5.81 -2.72 0.15 -1.44 -1.71 -1.42 -0.97 1.44 -1.37 -0.59 0.21 1.2 -0.08 0.11 -6.08 0.55 0.58 -0.66 1.48 0.45 -2.31 0.0 0.03 -2.1 0.59 0.78 -2.02 -0.32 -0.56 1.59 -1.02 -1.58
Zm00001d012961 (GRMZM2G144071)
-0.94 1.25 0.03 0.95 -0.07 -4.59 -7.28 -0.16 -3.2 -2.63 -2.29 -1.59 0.76 -1.17 -1.02 -0.12 1.51 -0.03 1.14 -7.34 -0.66 1.26 0.03 1.92 -0.09 -1.38 0.12 -0.13 - 1.07 0.9 -3.47 -0.91 -0.41 0.5 -0.98 -1.12
Zm00001d014599 (GRMZM2G177845)
-2.01 0.25 -0.48 -0.01 -0.59 -3.45 -3.18 -0.24 -2.8 -2.49 -1.77 -0.83 -0.72 -0.44 -1.15 -0.62 0.96 0.13 1.03 -5.63 0.47 1.03 -0.01 2.21 0.57 -0.11 -0.63 -0.06 - 1.29 0.86 -3.93 -1.25 -0.58 2.02 -1.51 -0.98
Zm00001d014966 (GRMZM2G074805)
-0.34 1.13 -0.19 0.74 0.1 -3.54 -2.95 0.17 -2.07 -2.06 -0.86 -1.0 0.84 -0.35 -0.47 -0.14 0.86 0.28 0.4 -2.65 0.19 0.36 -1.56 1.62 0.08 -0.49 0.0 0.1 -1.33 0.38 0.59 -1.85 -0.31 -0.48 1.65 -1.15 -0.9
Zm00001d016798 (GRMZM2G114241)
-1.2 0.58 -0.15 -0.03 -0.44 -4.07 -2.69 -0.05 -2.21 -2.14 -1.05 -0.81 0.48 -0.21 -0.72 0.23 1.11 0.44 1.09 -2.58 -0.17 0.51 -1.37 1.65 0.16 -0.5 0.07 0.42 0.08 0.77 0.67 - -0.03 0.34 1.07 -0.72 -0.81
Zm00001d017250 (GRMZM2G332843)
-0.83 0.85 0.07 0.46 -0.41 -4.63 -4.47 0.31 -4.64 -4.95 -1.39 -1.81 0.83 0.16 -1.58 -0.11 0.94 0.55 0.68 -1.15 -0.62 -0.19 -1.95 2.1 -0.18 0.01 0.16 -0.31 -1.99 1.42 1.06 -0.88 -0.76 -0.37 1.04 -1.27 -0.96
Zm00001d017317 (GRMZM2G165290)
-0.15 1.12 -0.04 0.95 0.07 -4.08 -3.28 -0.2 -2.28 -2.49 -2.92 -0.97 1.08 -0.31 -1.05 -0.2 1.08 0.25 1.07 -5.23 0.48 0.77 -1.79 1.59 -0.33 -0.15 0.56 0.05 -1.28 0.02 0.56 -1.48 -0.31 -0.85 1.18 -1.33 -1.57
-0.86 0.68 -0.52 0.85 -0.13 -4.52 -3.61 0.15 -2.46 -2.63 -1.78 -1.01 1.69 -0.27 -0.83 0.21 1.16 -0.13 0.49 -6.19 0.78 0.85 -1.31 1.43 0.14 -0.86 -0.08 0.02 -3.52 0.67 0.76 -2.29 -0.47 -0.66 1.48 -1.3 -1.47
Zm00001d019206 (GRMZM2G410033)
-1.51 0.86 -1.45 0.55 -0.2 -2.34 -1.48 0.44 -5.11 -4.46 -2.36 -0.93 1.82 -0.78 -1.49 0.03 1.72 0.16 0.35 -7.94 0.18 0.91 -2.14 2.04 0.27 -2.88 -0.35 -0.36 0.11 1.57 -0.28 -3.2 -1.85 -1.32 0.38 -1.44 -0.56
Zm00001d019452 (GRMZM2G399877)
-1.13 0.81 0.52 0.01 -0.32 -3.22 -3.87 0.0 -1.3 -1.39 -3.5 -0.95 0.42 -2.41 -0.69 0.04 0.5 0.25 1.0 -5.02 -0.61 0.05 -3.11 1.86 0.07 0.86 0.19 -0.04 - 1.62 0.9 -1.47 -0.73 -0.4 1.14 -0.63 0.29
Zm00001d020435 (GRMZM2G367234)
-2.05 0.4 -0.52 -1.48 -0.39 -4.35 -5.83 0.0 -2.55 -3.11 -1.24 -0.12 0.67 0.22 -0.94 0.3 1.11 0.0 1.01 -5.02 1.01 1.36 -4.87 2.17 0.45 0.33 -0.19 -0.41 - 1.4 0.75 - -1.42 -1.21 0.55 -0.91 -0.49
Zm00001d020526 (GRMZM2G160364)
-5.54 -1.14 -2.33 -1.06 -2.28 -4.42 -3.77 0.88 -6.21 -5.03 - -4.12 0.24 -0.62 -3.02 0.24 1.05 1.28 2.14 0.06 1.37 -1.02 - 2.7 0.73 -2.17 -1.17 -0.21 -2.35 1.2 1.36 - -2.24 -0.04 -0.05 -3.1 -1.48
Zm00001d021294 (GRMZM2G100058)
-1.71 -0.03 -1.05 0.28 -0.81 -2.73 -2.85 -0.59 -1.73 -2.28 -2.91 -0.37 0.17 -0.68 -1.05 -0.49 0.64 0.3 1.34 -6.09 0.56 0.74 -1.95 1.93 -0.09 -0.11 0.48 0.36 -0.06 1.48 0.43 -0.51 -0.16 -0.24 1.09 -0.73 -0.39
Zm00001d021704 (GRMZM2G058013)
-0.08 0.65 -0.2 1.06 -0.2 -1.57 -1.14 0.15 -1.73 -2.53 -1.23 -1.08 -0.38 -0.02 -1.29 0.32 1.08 -0.61 0.02 -5.13 0.92 -0.42 1.17 0.8 -0.35 -0.58 0.81 0.27 -2.57 -0.28 1.12 -1.93 -0.41 -0.14 1.47 -1.18 -0.31
Zm00001d022265 (GRMZM2G082365)
-0.94 1.1 -1.21 1.24 -0.03 -5.68 -4.68 0.74 -4.14 -3.94 -3.02 -2.1 1.89 -0.55 -0.62 -0.08 0.31 -0.37 -0.04 -6.87 0.5 0.45 -0.77 2.07 0.05 -2.33 -0.74 0.3 -0.84 1.17 0.1 -0.65 -0.23 -0.07 0.81 -1.53 -1.59
-0.41 0.06 1.36 0.19 0.2 -3.59 -2.91 -0.45 -1.91 -1.96 -2.6 -0.43 -0.18 -0.8 -0.85 0.26 0.81 -0.01 1.11 -5.93 1.07 0.71 -5.44 1.91 0.81 -0.45 0.21 0.28 - 1.31 -0.32 - -0.97 -0.45 0.99 -1.3 -0.78
Zm00001d026495 (GRMZM2G101179)
-1.11 0.36 -0.66 0.48 -0.33 -2.31 -1.81 0.5 -1.61 -1.7 -1.06 -1.02 0.98 -0.51 -0.65 0.17 1.13 -0.09 -0.04 -4.73 0.93 1.03 0.07 1.54 0.43 -0.43 -0.35 -0.12 -2.44 0.61 0.8 -1.57 -0.87 -0.45 1.37 -0.97 -0.98
Zm00001d027371 (GRMZM2G085909)
0.15 1.18 -0.26 0.73 0.11 -3.6 -2.59 0.38 -2.36 -2.73 -2.4 -1.02 1.26 -0.37 -0.75 0.15 0.96 0.16 0.25 -6.57 0.6 0.98 -1.79 1.3 -0.09 -0.41 0.13 0.47 -0.68 0.27 0.44 -1.55 0.0 -0.23 0.61 -1.05 -0.81
Zm00001d028275 (GRMZM2G040828)
-1.32 -0.05 -0.17 0.34 -0.4 -2.19 -5.09 -0.2 -5.04 -3.6 -2.29 -1.47 -0.43 0.77 -1.62 0.05 0.41 -0.35 0.37 -4.98 -0.72 0.6 -0.72 1.62 0.87 0.4 -0.43 -0.27 -1.05 1.81 1.54 - -0.91 -0.68 2.02 -1.32 -0.66
-0.55 1.39 -0.78 1.15 0.08 -4.16 -3.77 0.67 -3.18 -2.75 -2.94 -1.35 0.85 -0.22 -1.12 -0.23 0.93 0.47 -0.27 -4.22 0.7 1.35 -2.58 1.64 -0.02 -1.2 0.17 0.12 -0.99 0.56 0.78 -1.16 -0.26 -0.58 0.69 -1.39 -1.16
Zm00001d029764 (GRMZM2G383854)
-2.0 0.58 0.08 0.6 -0.56 -1.34 -4.78 0.56 -2.6 -1.6 -1.08 -0.63 0.85 -1.04 -0.92 -0.14 1.67 0.08 1.44 -5.85 0.26 1.21 -3.21 2.2 0.23 -0.99 -1.32 0.23 - 1.27 -0.56 -2.31 -0.88 -0.75 0.05 -1.01 -1.43
Zm00001d032661 (GRMZM2G380665)
-0.45 0.99 -0.21 0.82 -0.24 -3.53 -2.97 0.48 -2.22 -2.16 -2.95 -1.14 0.98 0.26 -1.26 -0.03 1.11 0.12 -0.57 -3.14 0.7 1.08 -1.41 1.81 -0.05 -0.7 -0.01 -0.15 -2.76 0.4 0.51 -2.1 -0.44 -1.11 1.66 -1.08 -0.89
Zm00001d032945 (GRMZM2G056989)
-1.31 0.54 -1.29 0.37 -0.63 -5.1 -2.1 0.76 -2.52 -2.69 -1.65 -1.36 1.15 -1.5 -0.85 0.17 1.18 -0.21 -0.13 -6.41 0.81 0.43 -1.73 1.97 0.27 1.38 -0.12 -1.11 - -0.76 1.17 -3.85 -1.1 -1.09 2.06 -1.37 -0.86
Zm00001d033916 (GRMZM2G147900)
-1.74 0.31 -0.17 0.3 -0.39 -4.58 -5.25 0.4 -2.87 -4.61 -3.6 -1.03 1.01 -0.8 -0.73 -0.15 1.33 -0.23 0.57 -8.14 0.87 1.62 - 1.95 0.6 0.02 0.04 -0.34 - 1.53 0.8 - -0.9 -0.19 0.55 -1.18 -1.12
Zm00001d035295 (GRMZM2G155252)
-0.73 -0.27 -0.27 -0.57 -0.58 -4.02 -3.17 0.26 -2.12 -1.77 -1.76 -1.33 0.81 -1.18 -1.16 0.04 1.11 0.68 1.74 -6.91 0.33 0.93 -1.05 2.12 0.76 -2.69 -0.51 -0.38 -0.22 2.18 -0.2 -1.29 -1.92 -0.41 -0.98 -1.67 -2.32
-1.72 0.54 -0.27 0.45 -0.41 -1.28 -0.64 0.39 -1.88 -2.05 -0.74 -0.34 0.09 0.51 -1.04 -0.48 0.66 0.1 1.0 -4.4 -0.71 -0.9 0.94 1.72 -0.43 0.45 -0.26 -0.36 -1.84 0.44 0.26 -2.14 -0.97 -0.6 2.07 -0.76 -0.94
-0.96 0.49 -1.23 0.38 -0.44 -4.18 -3.3 0.25 -2.81 -3.08 -2.32 -1.13 1.3 -0.38 -0.66 -0.04 0.47 -0.35 0.46 -5.83 0.31 0.15 0.26 2.08 0.68 -2.34 -0.08 0.03 -1.5 0.49 0.69 -1.18 -0.23 -0.14 2.0 -1.53 -0.94
Zm00001d039038 (GRMZM2G102779)
0.5 1.01 -0.17 1.24 -0.02 -2.07 -1.15 0.05 -0.88 -0.77 -1.79 -0.57 1.38 0.16 -0.21 -0.11 0.64 0.12 0.06 -5.54 -0.17 0.5 -0.51 0.66 -0.16 -0.74 0.06 0.2 -2.42 0.88 -0.25 -1.55 -0.13 -0.49 0.91 -0.54 -0.66
Zm00001d039179 (GRMZM2G073551)
-1.85 0.51 0.12 0.7 -0.21 -3.62 -3.18 0.04 -1.92 -2.27 -1.89 -0.62 0.14 0.51 -0.75 0.21 1.67 -0.09 0.27 -5.52 0.65 0.96 -2.82 1.32 -0.38 -0.43 -0.27 0.55 -1.31 1.32 0.34 -1.04 -0.12 -0.05 0.94 -0.73 -1.01
-1.74 1.2 -0.09 0.55 -0.1 -6.01 -4.84 0.11 -2.97 -3.22 -1.27 -0.84 -0.38 -0.94 -1.08 -0.19 0.68 0.3 0.26 -4.98 0.7 0.21 -3.44 2.32 1.14 0.13 0.24 0.22 - 1.47 0.02 0.21 -0.74 -0.17 0.49 -0.7 -3.64
Zm00001d040293 (GRMZM2G172956)
-1.5 0.81 -0.87 0.52 -0.2 -6.0 -3.58 0.63 -4.05 -3.83 -2.3 -1.64 1.25 -0.02 -1.15 -0.0 1.18 -0.6 -0.51 -7.7 1.13 0.41 -0.31 2.23 -0.31 -2.01 -0.33 -0.14 -2.61 0.89 0.74 -0.48 -0.59 -0.52 1.59 -1.56 -1.31
-0.62 1.47 -0.39 0.85 -0.12 -3.68 -3.44 -0.34 -1.44 -1.4 -2.38 -0.74 1.09 -0.38 -0.73 -0.17 0.56 -0.04 0.65 -5.97 -0.41 0.41 0.38 1.24 -0.43 0.53 0.29 0.15 -5.42 0.42 0.1 -2.31 -0.22 -0.6 1.95 -0.93 -1.35
-1.52 0.7 -0.39 0.16 -0.29 -4.43 -7.58 -0.06 -4.13 -3.58 -2.14 -0.69 0.46 -0.01 -0.71 0.31 1.34 0.28 1.07 -4.87 0.4 1.03 - 2.24 0.06 -0.83 0.13 -0.36 - 1.26 0.47 -3.77 -1.05 -0.17 1.39 -1.1 -1.47
Zm00001d044005 (GRMZM2G432918)
-4.47 -1.14 -2.62 -2.94 -2.39 -4.21 -1.96 0.76 -0.66 -1.82 -1.48 -0.86 0.26 -3.66 -1.21 -0.1 1.27 -0.23 1.4 -3.2 1.32 1.31 -3.14 2.16 0.94 -2.75 0.37 -1.08 0.6 2.41 0.2 - -3.75 -0.74 -0.86 -0.75 -1.65
Zm00001d044388 (GRMZM2G074599)
-2.46 -0.15 -1.1 -0.15 -0.96 -4.26 -3.21 0.14 -0.4 -0.16 -0.24 0.32 0.53 -0.72 -0.44 -0.34 0.78 -0.05 1.11 -7.5 0.19 0.34 -0.02 1.87 -0.1 -0.03 -0.81 0.3 -1.27 1.12 0.09 -2.07 -0.35 -0.69 1.82 -0.55 -1.65
Zm00001d044944 (GRMZM2G160887)
-1.49 0.63 0.13 -0.13 -0.37 -2.31 -1.96 -0.27 -0.78 -0.77 -0.26 -0.63 0.38 -0.79 -0.24 -0.35 0.69 -0.06 0.81 -2.95 -0.83 -0.3 -3.99 1.03 -0.61 0.92 0.92 0.4 - 1.56 0.85 -3.4 -0.06 0.17 1.42 -0.3 -0.35
-0.17 0.66 0.0 0.46 0.07 -1.38 -1.2 -0.17 -1.52 -1.34 -0.72 -0.47 0.19 -0.46 -0.7 -0.0 1.03 -0.11 0.34 -3.23 0.44 0.68 0.04 1.33 -0.15 0.14 -0.15 0.13 -2.22 0.75 0.06 -2.5 -0.56 -0.46 1.57 -0.57 -0.23
Zm00001d049196 (GRMZM2G459532)
-0.83 0.1 -0.45 0.1 -0.58 -3.19 -3.0 -0.68 -3.67 -4.58 -2.55 -0.5 0.78 0.37 -0.41 -0.15 0.49 1.75 2.39 1.15 -0.39 -0.31 -3.86 1.14 -0.92 0.2 0.18 0.04 - 1.29 -0.27 -2.38 -1.02 -0.48 0.2 -1.09 -2.49
Zm00001d051742 (GRMZM2G122767)
-0.43 0.5 -0.57 0.33 -0.22 -2.67 -2.73 0.21 -2.2 -2.27 -1.87 -1.12 0.74 0.62 -0.84 0.16 1.03 0.25 0.36 -6.08 0.43 1.65 -1.58 1.57 0.25 -0.27 -0.24 -0.01 -1.88 1.1 0.3 -3.13 -1.06 0.05 1.04 -0.94 -0.96
Zm00001d052854 (GRMZM2G071405)
-1.72 0.49 -0.79 0.12 -0.54 -3.92 - -0.34 - -5.57 -4.26 -1.72 0.27 0.08 -1.36 0.58 0.96 0.57 0.76 -3.4 1.52 1.39 -0.14 2.18 0.87 -3.42 -0.66 -0.64 - 1.39 0.46 - -1.0 -0.64 0.76 -1.41 0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.