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Heatmap: Cluster_47 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
-0.53 -0.67 -1.06 0.82 0.51
-1.56 -1.62 -0.16 0.53 1.0
-5.56 -3.24 - 1.29 1.28
-1.31 -1.27 -1.85 1.43 0.26
Ppi_g11478 (LHCB2)
 -2.89 -1.18 -4.0 1.64 0.32
-2.67 -0.96 -5.77 1.06 1.16
- -2.8 -2.36 1.31 1.13
- -1.34 - 1.03 1.36
Ppi_g21237 (ACT8)
 -3.18 - - 1.6 0.89
Ppi_g21268 (RCA)
 -3.21 -0.78 -2.91 1.63 0.1
-2.6 -1.02 -2.86 1.08 1.06
- - - 1.87 0.44
- - - 1.87 0.42
-3.56 -2.83 - 1.26 1.25
-3.15 -1.31 -1.07 0.7 1.26
Ppi_g21915 (UBQ11)
 -4.77 -3.02 -4.84 1.24 1.29
-2.93 -1.75 -5.22 1.27 1.09
- -3.82 -2.34 1.72 0.53
- - - 1.49 1.13
- - - 0.66 1.78
- - - 1.59 1.0
-3.53 - -2.47 1.66 0.66
-3.74 -2.16 -1.16 1.1 1.08
- -3.27 - 1.48 1.07
- - -1.52 0.56 1.67
- - - 1.63 0.93
-0.75 -2.35 -3.04 1.6 0.09
Ppi_g23054 (HTB1)
 - -3.34 - 1.34 1.25
Ppi_g23088 (FD1)
 -4.44 -0.96 -4.56 1.61 0.43
- -2.68 -3.97 1.45 1.03
- -2.16 -2.64 1.04 1.36
-2.75 -0.74 -3.85 0.88 1.23
- - - 1.87 0.44
Ppi_g23439 (HTA11)
 - -2.09 - 1.46 1.01
-3.43 -1.66 -1.55 1.45 0.59
Ppi_g23658 (HTB4)
 - - -4.33 0.86 1.65
- -1.48 -1.61 1.73 -0.0
- - - 1.85 0.47
- - - 1.06 1.54
Ppi_g23863 (CPN10)
 - -2.4 - 1.77 0.49
- -0.83 - 1.67 0.32
- -4.58 -3.29 1.33 1.22
- -2.76 - 1.24 1.32
- -1.73 - 1.57 0.8
-4.73 -1.62 - 1.62 0.65
Ppi_g24317 (ACT11)
 -1.33 -4.18 -3.52 1.44 0.8
- - - 1.55 1.05
- -2.92 - 1.38 1.18
-3.49 -0.47 -5.36 1.22 0.87
- -2.97 -1.78 1.33 1.04
-3.46 -3.3 -3.4 1.45 0.99
- - - 1.55 1.05
Ppi_g25062 (EIF5A)
 - - - 1.77 0.67
Ppi_g25161 (RAC3)
 - -1.57 - 1.45 0.95
- - - 1.54 1.07
- -3.51 -2.58 0.94 1.5
- -2.28 -3.48 1.89 0.01
- - - 1.25 1.39
Ppi_g25446 (LHCB2)
 -4.09 -6.16 -6.3 1.33 1.26
-4.58 -4.58 -3.85 1.06 1.47
- - - 1.78 0.65
-2.07 -2.31 -4.74 1.27 1.08
- - - 1.62 0.94
- - - 1.83 0.52
- - - 1.37 1.27
- - - 1.52 1.1
- - -1.41 1.14 1.27
- - - 1.59 0.99
Ppi_g26943 (ACT8)
 -4.57 -0.84 -7.0 1.23 1.04
-2.82 -2.8 - 1.3 1.17
-1.42 -0.66 - 1.07 0.93
-2.04 -2.65 -3.08 1.04 1.28
Ppi_g27284 (ACT11)
 -2.31 -1.25 -3.57 1.15 1.05
- - - 1.51 1.1
- -1.8 - 1.71 0.52
- -2.88 -2.0 0.99 1.39
- -2.38 -3.49 1.81 0.28
- -3.16 - 1.37 1.2
-3.87 -2.54 -2.42 1.5 0.8
- -1.58 -2.72 1.53 0.69
Ppi_g28190 (RD19)
 - - - 1.61 0.96
- -3.8 - 1.67 0.8
- -2.21 -1.78 1.6 0.55
- - - 1.51 1.1
-1.58 -3.66 -2.77 1.09 1.21
- - - 1.36 1.28
-3.66 -0.41 -3.67 1.42 0.49
-2.91 - - 1.43 1.12
-3.26 -0.84 -4.12 1.27 0.9
Ppi_g28559 (TUB6)
 -4.84 -0.38 -2.94 1.12 0.92
- - - 1.56 1.03
Ppi_g28923 (LHCB3)
 -4.09 -2.14 -3.77 1.19 1.24
- - - 1.39 1.26
Ppi_g29257 (ACT11)
 -1.75 -2.18 -4.47 1.45 0.77
Ppi_g29347 (OEE1)
 -4.98 -2.4 -5.09 1.32 1.18
Ppi_g29513 (REF1)
 - - - 0.76 1.73
- - - 1.62 0.94
- - - 1.28 1.36
- -1.2 - 1.83 0.02
-3.54 -1.9 -4.2 1.35 1.04
Ppi_g30609 (SAP10)
 -1.99 -1.7 - 0.97 1.31
-4.07 -3.06 - 1.56 0.91
Ppi_g31548 (RBCS1A)
 -4.88 -0.89 - 1.67 0.31
- -4.37 -2.22 1.01 1.45
Ppi_g31701 (Hsp81.4)
 -2.55 -2.14 -4.59 1.22 1.16
-6.0 -1.82 -6.1 1.53 0.85
- -2.04 -1.65 0.97 1.31
Ppi_g32166 (RCA)
 -3.06 -1.55 -2.81 1.12 1.16
-1.62 -1.46 -1.79 1.01 1.0
- - - 1.93 0.26
- - -3.07 1.54 0.98
-1.5 -2.55 -0.53 0.86 0.98
- - - 1.39 1.25
- - - 1.69 0.82
- - - 1.94 0.22
-3.8 - -5.67 1.44 1.13
- - - 1.37 1.27
- - - 1.25 1.39
- -2.74 - 1.76 0.54
- -3.15 -3.25 1.5 0.97
-4.4 -2.28 -4.35 1.39 1.05
Ppi_g34252 (FER1)
 - - - 1.5 1.12
- -1.21 -2.9 1.28 1.01
- - - 1.42 1.21
- - - 1.5 1.12
- - - 1.41 1.23
- - -3.17 0.75 1.68
- -3.8 -5.09 1.82 0.46
- -1.85 - 1.09 1.37
- - -2.75 1.28 1.28
-4.86 - - 1.47 1.13
Ppi_g35059 (REF1)
 -5.42 -4.05 -2.3 1.18 1.29
-2.24 -4.78 - 1.18 1.31
- - - 1.26 1.39
- -2.94 - 0.88 1.6
-3.66 -1.34 - 1.19 1.17
- -2.04 -5.2 1.38 1.09
- - - 1.48 1.15
Ppi_g37079 (LHCB2)
 -3.62 -1.47 -2.79 1.03 1.24
- - - 1.52 1.09
-2.9 -2.11 - 1.2 1.22
- -1.13 - 1.36 0.98
- -2.89 - 1.15 1.4
Ppi_g37781 (UBQ11)
 -5.2 -1.49 -4.28 0.69 1.56
- - -3.24 1.32 1.26
-2.68 -1.77 - 1.27 1.1
- -2.1 -3.37 1.39 1.04
- -2.5 -4.34 0.53 1.74
- - - 1.62 0.94
- - - 1.64 0.92
-5.58 -1.99 -5.87 1.12 1.34
Ppi_g41554 (OLI5)
 - -5.58 -3.77 0.82 1.65
-6.94 - - 1.48 1.14
- -3.99 - 1.55 1.01
- -7.25 -4.18 1.4 1.2
-1.32 -1.55 -0.53 0.68 0.98
- -4.08 -3.18 1.22 1.32
- -5.69 - 1.27 1.36
- - - 0.85 1.68
- - - 1.59 0.99
- -3.28 -2.57 1.18 1.3
-3.8 - - 1.26 1.34
-2.93 -2.54 -3.46 1.15 1.26
-3.23 -2.45 -2.15 1.23 1.09
Ppi_g46955 (CRT1)
 - -7.11 -4.76 0.99 1.57
-2.9 -2.95 -1.12 0.24 1.63
-4.62 -1.44 - 1.25 1.14
- -1.74 -3.78 1.34 1.06
-5.33 - -2.38 1.24 1.28
- - -2.5 1.3 1.24
Ppi_g50211 (PRF5)
 - - - 1.49 1.13
- - - 1.45 1.18
-2.22 - -5.13 1.28 1.22
- - - 1.53 1.08
-1.18 - -1.86 1.41 0.71
Ppi_g51358 (Hsp81.4)
 - - -2.39 1.44 1.07
- - - 0.89 1.65
- -3.15 - 1.13 1.43
-1.24 -1.82 - 1.69 0.08
Ppi_g53971 (MEE24)
 -1.1 -1.24 -0.83 0.52 1.08
-2.42 -3.72 -3.27 1.57 0.74
-1.26 -1.31 -2.03 1.32 0.53
-1.87 -2.4 -0.38 0.73 1.07

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.