Heatmap: Cluster_125 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d001929 (GRMZM2G070287)
-5.39 -7.23 -0.63 1.55 2.36 -4.13 -2.95 -4.85 -0.58 -0.97 -3.35 -3.18 - 3.73 -1.4 -1.16 -4.38 1.43 -3.57 -8.37 -2.61 -2.09 -1.66 -2.05 0.28 - -4.83 -0.69 2.34 - -5.65 -4.33 -3.43 -1.17 -2.98 -0.84 -0.89
- - - - -4.73 -0.77 - - - - - 0.43 - 4.69 - -0.32 - - 1.62 0.12 -0.93 - - 1.33 - - - -0.4 - - - - -1.41 - - -2.73 -
- - 0.6 -1.67 -0.22 -0.84 -3.36 -3.49 3.22 1.89 - -0.25 - 3.24 0.96 -2.54 - 1.9 - -8.2 - - - - -4.94 - - -7.82 - - - - -5.42 -3.24 -0.43 1.35 -0.09
- - -0.21 -1.1 1.19 -1.02 -1.62 - -0.08 -1.82 -0.9 -1.95 - 3.59 -0.16 0.16 -4.63 -0.16 -5.27 - - - -1.91 - -3.59 2.2 -0.68 1.21 - 1.02 - 1.1 -1.95 -0.81 0.78 -0.61 -1.85
-1.92 - 1.88 2.67 0.9 -1.86 -2.27 -4.84 1.61 -0.68 -3.45 -0.59 -0.9 2.99 1.32 0.86 -6.15 0.04 -4.41 -8.19 -3.54 -4.03 -6.09 -6.79 -2.36 -1.5 0.2 -1.25 -0.63 - -5.5 -2.71 -3.99 -3.15 -1.62 0.44 -0.03
- - - 4.39 - - - - - - - -5.79 - 3.88 - -1.51 - - -2.12 - - - - - - - - - - - - - -1.29 -1.92 - -6.59 -
- - - - - - - - - - - -1.64 - 5.18 - -2.39 - - - - - - - - - - - - - - - - - - -1.98 - -
Zm00001d011853 (GRMZM2G016657)
- - - - -4.22 1.31 -5.07 -5.91 1.44 0.29 - -1.07 0.27 3.93 1.22 -3.29 - 0.48 -2.22 -3.3 - - - - 0.86 - - -2.53 1.16 -2.37 -1.08 - -4.16 -2.4 -3.0 0.91 1.21
Zm00001d012278 (GRMZM2G341166)
- - - - 0.89 - - - - - - - - 4.26 - -3.49 - - - 0.91 - - - - - - - - - - 2.77 - 2.84 - - - -
Zm00001d014139 (GRMZM2G135513)
-0.08 1.05 3.04 -1.08 1.35 -2.32 -1.41 - -0.26 -0.09 - -0.3 -1.18 3.05 1.06 0.32 -3.41 0.55 -2.9 - -2.38 -2.23 - - -3.18 -3.07 0.77 -3.09 - - - - -5.74 -3.38 -0.86 1.07 -0.76
Zm00001d016027 (GRMZM2G088791)
- 3.26 - - 1.36 - - - - - - - - 3.89 - - - - - - - - - - - - 3.08 - - - - - - - - 0.64 -
Zm00001d016558 (GRMZM2G004856)
- - -4.9 2.62 2.93 -2.02 -2.0 -2.82 -3.89 - 0.86 0.97 - -2.16 -0.76 -2.02 -4.28 -2.68 -3.04 - -0.45 -1.03 -0.85 -0.91 -0.66 -2.16 -1.77 -1.91 0.61 - -0.11 -1.48 -3.76 -5.14 -7.72 1.18 3.08
Zm00001d017274 (GRMZM2G074604)
-0.69 -2.73 1.31 1.57 1.58 -2.13 -3.2 -2.92 -0.36 -1.26 -5.1 -1.35 0.36 3.33 0.01 0.12 -2.08 1.09 -1.47 -8.14 -3.22 -1.92 -2.69 -3.36 -1.16 0.77 -0.08 -1.11 -2.17 -1.95 -3.04 -4.35 -4.0 -1.14 -1.44 0.54 1.23
Zm00001d017536 (GRMZM2G165530)
-3.66 -2.42 1.41 0.42 0.38 -1.25 -1.03 -1.9 0.32 -0.87 -1.73 -1.21 -1.46 2.78 0.18 1.06 -1.68 2.41 -2.24 -0.17 -0.75 -1.23 -4.16 -1.91 -1.12 0.06 -1.46 0.19 - -1.34 -0.55 -0.5 -2.19 0.85 0.15 -0.09 -1.57
Zm00001d017590 (GRMZM2G135175)
-0.31 1.95 -1.21 2.3 1.96 -1.82 -2.82 -0.33 0.53 -0.85 - -0.44 - 2.32 0.91 -0.27 -2.04 -4.98 -3.16 -7.48 -3.21 -1.76 0.31 -1.43 -4.85 -2.13 1.3 -0.84 - - -0.91 - -4.87 -5.97 0.64 -0.29 1.47
Zm00001d018801 (GRMZM2G031504)
-6.85 -8.29 0.02 1.33 2.04 0.06 -0.84 -0.45 1.06 0.28 -1.84 0.38 - 3.32 1.29 0.08 -7.77 -0.41 -7.31 - -7.6 -4.94 0.55 -4.96 -3.22 1.29 -7.15 -3.11 - - - - -1.4 -1.28 -0.45 0.25 -0.09
Zm00001d020059 (GRMZM2G325938)
- - -4.48 - 1.21 -4.59 - - -4.52 - - 0.32 - 4.78 -6.62 1.47 -3.86 -5.59 -1.75 - -4.86 -4.01 - -5.1 -4.15 -2.67 - -6.32 - - -6.17 - -3.47 -5.88 -0.62 -0.19 -0.74
- - - - 1.91 - - - - - - -0.73 - 4.9 - 1.52 - - - - - - - - - - - - - - - - - - - - -
Zm00001d020651 (GRMZM2G128233)
-2.17 -8.71 0.26 -0.38 -0.65 -1.7 -6.24 -4.99 -1.55 -2.66 -4.95 -3.04 -1.49 4.87 -1.1 0.49 -7.72 -2.41 -7.07 -9.98 -2.6 -2.93 - -6.94 -3.71 -4.5 -3.92 -2.88 - - -8.25 - -7.58 -3.57 -1.87 -1.46 -3.87
Zm00001d022555 (GRMZM2G435261)
- - - - -2.1 - - - - - - -1.85 - 4.47 - -3.07 - - 2.45 - - - - - 0.51 - - - - 2.71 - - - - -0.47 -4.02 -
Zm00001d023950 (GRMZM2G073943)
-0.42 -2.09 1.98 2.02 1.22 -1.64 -4.06 -2.95 -0.47 -1.24 -2.1 -0.64 -1.05 3.29 0.29 0.08 -2.03 0.02 -4.71 -5.09 -2.2 -3.03 -2.9 -1.1 -1.42 0.28 1.03 -1.65 -1.16 -3.27 -1.77 0.11 -2.86 -1.66 -0.21 -0.29 -1.54
Zm00001d025861 (GRMZM2G043813)
-4.45 - -0.5 0.09 0.49 -0.89 -6.94 -6.2 -7.07 -7.34 -3.35 -4.89 -3.3 4.07 -1.68 -1.72 -5.87 -1.86 -2.31 -3.56 -4.19 -5.35 - -7.64 -5.95 - -2.97 1.16 -0.71 -4.33 -2.44 2.84 1.31 0.06 -1.47 -1.09 -2.88
Zm00001d026268 (GRMZM2G156004)
-10.02 - -0.48 -0.28 0.33 -2.08 -4.53 - 0.09 -0.62 -3.68 -2.21 - 4.67 -1.09 1.07 - 0.71 -9.6 -9.45 -8.05 -4.97 - - -4.13 - - -5.8 -1.89 - - - -4.15 -5.84 -3.14 0.14 -0.79
- - - - -0.91 - - - - - - -3.53 - 4.98 - -1.61 - - - - -0.42 - - - - - - 0.91 - - - - - - -1.16 - 0.51
Zm00001d027673 (GRMZM2G150925)
-2.12 -5.86 1.06 1.63 0.17 -2.46 -4.04 - 0.75 -2.03 -3.65 -0.48 -1.37 2.61 1.12 0.49 -5.14 -0.14 0.07 -2.43 -2.02 -2.74 - - -1.37 -1.24 -1.68 1.03 - -1.72 -4.69 -0.14 2.52 -0.73 0.73 0.66 -0.17
Zm00001d029718 (GRMZM2G039312)
-1.39 -2.37 1.14 2.82 1.27 1.32 -0.3 -1.3 1.16 0.47 -5.62 -0.26 -1.08 1.21 0.34 1.19 -1.72 -0.92 -1.49 -6.95 -0.25 -0.97 - -5.75 -2.44 -3.93 1.09 -3.37 - -2.3 -2.72 -2.14 -6.01 -3.07 -0.85 1.27 0.56
Zm00001d029814 (GRMZM2G113761)
-5.12 -8.21 -0.34 -0.05 1.46 1.03 1.01 -2.51 -0.08 0.19 -3.03 -1.08 0.28 3.28 1.47 1.62 -6.61 -1.22 -3.74 -9.27 -7.93 -4.97 -8.94 -3.44 -0.35 -4.86 1.05 -1.64 -3.48 -5.19 -10.83 -1.85 -5.44 -2.61 1.45 0.12 -0.91
Zm00001d030529 (GRMZM2G167584)
-3.08 -1.0 1.75 -2.76 1.28 -3.38 -3.35 -1.61 1.1 -1.01 -2.6 -1.84 -0.57 2.46 0.86 -0.17 -1.54 0.77 -1.16 -5.76 -1.09 0.33 -2.53 -2.0 1.18 -1.41 -4.75 0.97 1.31 0.33 -4.36 - 0.55 -0.13 0.46 -0.49 -1.36
-4.3 -6.81 -0.65 3.27 2.18 -0.98 -2.58 -2.76 -2.61 -4.25 -0.88 -0.02 -4.64 2.99 -0.73 -0.68 -4.11 -1.04 -4.43 - 0.97 -1.76 0.18 0.59 1.22 - -1.46 -2.32 - -3.58 -4.26 -0.77 -4.09 -3.43 -3.72 -0.65 -1.48
Zm00001d030942 (GRMZM2G038893)
-2.49 -4.09 -0.62 2.85 1.76 -1.16 -2.88 -4.37 -3.85 -3.61 -1.62 0.09 -3.89 2.71 -0.59 -0.2 -3.57 -0.08 0.35 -6.89 1.14 -1.56 0.23 -0.09 0.68 0.33 0.14 -0.82 0.44 -3.46 -2.9 -1.78 -2.85 -2.06 -3.05 -0.47 -0.76
Zm00001d031760 (GRMZM2G050556)
1.09 -2.74 0.0 0.58 1.46 -4.64 -7.4 -2.21 -3.64 -4.8 -2.11 -3.91 -0.59 2.06 -0.1 1.25 -1.99 2.08 -1.5 0.95 0.61 2.12 - -0.82 1.26 - -1.78 -0.29 - -0.43 -2.65 - -3.79 -0.17 0.07 -1.2 -0.85
Zm00001d031971 (GRMZM2G456217)
-11.06 - -7.55 0.34 -0.43 -3.17 -4.46 -3.72 -3.08 -3.84 -3.82 -2.6 -6.35 3.28 -0.82 -6.45 -9.57 -0.65 -4.02 -5.06 -2.27 -0.51 -6.96 -11.36 -1.5 -9.34 -4.56 1.81 3.28 -5.56 -5.19 0.78 0.03 2.43 -4.18 -1.42 -2.39
Zm00001d032339 (GRMZM2G321010)
-2.88 -4.35 2.03 0.72 1.06 -4.59 -4.91 -4.65 1.13 -1.13 -3.22 -1.34 -1.41 2.99 0.88 -0.3 -2.4 0.34 -1.66 - -0.95 -1.82 -6.39 -3.43 -1.43 -2.77 -1.85 0.91 -1.48 -4.01 -2.27 0.27 1.86 0.48 -0.21 0.15 -0.77
Zm00001d032788 (GRMZM2G116360)
-3.26 - -7.11 3.9 -1.55 - - -4.55 -1.51 -3.46 - -2.92 -0.79 2.89 0.74 -4.15 - 1.36 -0.54 -9.34 -4.37 - - - 0.25 - - 1.36 - - -3.45 - -1.15 0.93 -4.0 -0.8 0.2
Zm00001d033292 (GRMZM2G070252)
-1.71 -4.44 1.63 2.01 1.78 -1.2 -2.45 -1.95 -0.31 -0.57 -1.96 -0.38 1.57 2.64 0.53 -0.25 -2.27 0.29 -0.02 -9.11 0.5 -0.18 -1.4 -2.56 -0.5 -0.97 -2.77 -1.68 -3.86 -3.44 -4.18 -4.19 -3.64 -1.99 0.19 0.51 0.17
Zm00001d033877 (GRMZM2G089118)
- -4.73 - 0.33 -0.21 -2.26 -4.11 -1.69 0.93 0.05 - -0.76 -3.73 3.97 1.03 -2.4 -4.91 0.67 -2.07 -4.03 -0.95 -2.29 - -0.65 -1.94 -3.61 -4.3 -0.1 - -0.17 -0.79 1.14 -0.53 -1.46 0.95 -0.29 -0.63
Zm00001d035084 (GRMZM2G092465)
-0.13 -3.98 2.69 1.58 1.32 -4.64 -4.84 -4.61 -3.02 -2.71 - -3.57 1.48 3.61 -0.48 0.43 -7.39 1.47 -2.91 - -4.2 -2.67 - - -0.26 - -5.51 -6.19 - - - - -9.5 -1.42 -2.09 -0.09 -0.07
Zm00001d035131 (GRMZM2G365053)
- - - 0.66 - - - - - - - -7.21 - 4.49 - -1.9 - -2.97 - -1.45 - - - - - - - -2.45 3.17 - - 1.33 -1.27 - - -6.73 -
Zm00001d039958 (GRMZM2G031004)
-2.75 - -2.37 -4.11 -2.37 -3.69 -4.66 -7.55 -6.1 - -4.78 -4.39 -4.22 5.07 -4.37 -1.79 -8.25 -4.62 -5.32 -3.15 -3.41 -6.18 -3.41 - -0.77 -0.13 -3.99 -6.82 - - -6.7 - -8.78 -5.47 -3.78 -3.74 -6.05
- - - - 0.16 - - - - - - - - 4.82 - 0.37 - - - - 2.66 - - - - - - - - - - - - - - - -
- - - 3.58 -6.69 - - - -1.38 -0.67 - -5.41 - 4.02 -2.79 -2.1 - -1.24 -2.98 -3.0 - - - - - - -2.52 -0.73 - - -0.29 0.56 0.98 0.57 - -3.13 -
Zm00001d041709 (GRMZM2G155998)
-1.24 -3.91 -0.37 0.85 0.28 -0.9 -0.84 - 1.5 -0.53 -1.31 0.19 -4.55 3.02 1.6 -1.03 -4.97 0.64 0.04 -6.35 -6.19 -4.59 -0.5 -7.09 -2.58 0.07 -3.11 -1.45 -0.95 - -2.96 2.56 -0.83 -1.44 -1.93 0.46 -0.55
- - -0.91 - 1.11 - -2.14 - - - - -1.75 - 3.81 0.33 0.56 -1.33 - 1.64 - - 0.59 - - -1.42 - - 2.71 - - - - 1.91 -1.54 - 0.04 -
- - - - - - - - - - - -5.4 - 5.21 - - - - - - - - - - - - - - - - - - - - - - -
- - - - -3.17 -2.45 -2.92 - - - - -3.11 - 5.06 - -3.53 -2.59 - -3.0 - - -0.52 - - - 0.43 - - - - - - - - -0.92 -4.3 -
-5.34 - -1.21 -1.33 -2.04 -3.75 -3.46 - -5.74 -6.01 -4.7 -2.98 - 5.01 -4.91 -0.59 -4.96 -4.38 -5.98 -5.51 -2.52 - - -3.46 -1.93 -4.4 -4.99 -1.76 - - -4.35 - -8.06 -4.73 -2.44 -4.43 0.43
Zm00001d045582 (GRMZM2G135044)
-2.47 -2.86 0.99 0.1 0.27 -2.93 -3.27 -3.67 -0.89 -2.37 -4.86 -1.86 -1.1 3.46 0.73 0.68 -3.08 -0.21 -2.87 -7.01 -1.07 -0.97 -3.66 -1.56 -0.85 -0.53 -0.48 -0.71 -1.33 -3.49 2.97 -1.83 -3.41 -0.65 -1.01 -0.0 -1.24
Zm00001d046149 (GRMZM5G812126)
-0.93 -4.46 1.55 1.9 2.23 -1.86 -3.02 -5.31 1.27 -0.94 -2.54 -0.8 -0.98 3.35 1.36 -0.35 -5.24 0.28 -1.31 -8.91 -3.98 -1.86 -1.96 -6.29 -2.47 -1.1 -1.29 -1.66 -0.17 - -7.97 - -3.78 -1.34 -3.21 0.3 -0.8
- - - - 1.74 - - - - - - - - 4.97 - -0.2 - - - 0.58 - - - - - - - - - - - - - - - - -
Zm00001d047420 (GRMZM2G313529)
-6.66 -7.61 0.18 1.03 0.03 -2.65 -2.08 -1.42 0.72 -0.65 -2.62 -0.25 -1.91 3.36 0.69 -0.09 -4.45 -0.69 -2.96 -3.13 -1.43 -1.13 -2.37 -4.89 -2.15 -1.12 -5.49 0.68 2.12 -6.8 -3.42 0.65 1.66 -1.05 -4.17 0.01 -0.49
Zm00001d047507 (GRMZM2G055827)
2.47 -1.28 -2.01 2.99 3.23 - -3.71 -0.27 - - - 0.61 - - -2.29 -1.39 - -3.08 - - - - - -1.34 -1.97 - 2.02 -2.39 - - 1.07 - -0.22 -3.21 -2.3 -0.89 0.71
Zm00001d048590 (GRMZM2G058868)
2.16 0.73 -0.77 3.23 1.41 -3.88 -4.27 -6.06 -6.4 -6.97 - -5.68 -0.43 3.24 -2.02 -0.35 -2.7 -2.26 -4.09 - -1.84 -2.3 -2.96 -0.21 -0.16 - -0.24 -0.96 - -1.12 -2.9 - -4.84 -0.88 -0.14 -1.57 -1.84
Zm00001d048608 (GRMZM2G122073)
- -7.64 0.46 1.37 0.58 -1.94 -2.23 -1.49 1.99 0.29 - -0.98 -2.01 3.71 0.96 0.64 - 0.39 -6.67 -4.06 -7.26 -4.51 - - -5.58 -1.7 -4.74 -5.8 1.47 - -7.81 - -6.57 -3.09 -1.2 0.94 0.07
Zm00001d048985 (GRMZM2G127143)
2.1 -1.87 0.6 1.56 1.73 -0.09 -0.41 -2.68 -0.56 -0.6 -3.67 -1.25 0.71 3.42 0.73 -1.44 -4.72 -0.99 -6.12 -8.22 -4.23 -3.03 - -3.17 -2.12 -3.11 -1.55 0.04 -0.24 -5.57 -5.45 -1.96 -1.12 -1.32 -1.57 -0.04 -0.42
- - - 1.68 -5.65 - - - - - - -7.93 - 5.04 - -1.69 - - - - - - - - - - - - - - - - -0.67 - - -5.72 -
- - - - -0.45 - - - - - - - - 5.1 - 0.95 - - - - - - - - - - - - - - - - - - - - -
Zm00001d051161 (GRMZM2G160541)
-1.99 -5.43 1.05 2.54 1.49 -1.15 -2.99 -5.43 -0.99 -2.01 -5.81 -0.77 -3.19 3.82 -1.06 0.01 -3.81 0.0 -0.88 -10.4 -3.52 -2.67 -2.98 -6.74 -3.23 -3.14 0.22 -3.26 -6.32 -2.76 -3.51 -8.17 -4.75 -3.9 -1.38 0.86 1.2
Zm00001d052191 (GRMZM2G008819)
-1.4 -6.89 2.43 2.36 1.76 -2.12 -4.29 -9.45 -1.81 -2.49 - -2.9 -5.39 3.59 -1.96 -1.09 - 0.36 -3.73 -8.78 -1.89 -1.91 - -2.49 -1.75 -4.43 -0.09 -1.97 0.62 -5.91 -3.02 0.96 -2.26 -3.41 -1.26 -1.01 -0.7
Zm00001d052324 (GRMZM2G388587)
0.19 -5.37 2.2 0.41 0.22 -4.11 -7.2 -7.36 -5.76 -6.92 - -4.09 -1.97 4.53 -1.57 1.74 -9.33 -1.45 -4.14 -11.27 -9.11 -6.25 - - -4.71 - -2.37 -4.25 - -5.91 -8.0 - -9.24 -3.96 -2.14 -1.84 -2.01
Zm00001d052433 (GRMZM2G022799)
-4.99 - 0.46 0.51 0.71 -3.35 -4.01 -6.16 1.28 -0.92 -5.03 -0.65 -2.36 2.65 0.9 0.24 -4.91 0.45 -3.21 -6.7 -6.22 -1.71 -7.94 -8.03 -1.35 -1.68 -3.34 0.5 2.97 - -5.71 1.85 -2.8 -0.11 -0.46 0.34 -0.62
Zm00001d052793 (GRMZM2G343828)
0.77 -1.99 1.05 1.91 0.61 -1.98 - - -7.57 -8.73 -3.46 -3.01 -0.88 4.11 -0.9 -0.17 - 2.4 -7.06 -0.9 - -5.73 - - -1.95 -7.12 -1.89 -4.77 - -5.72 -6.93 - -4.71 -4.9 -0.44 -0.8 -2.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.