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Heatmap: Cluster_262 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
0.43 1.64 - -1.8 -2.04
0.75 1.73 - - -
0.74 1.56 - -2.72 -2.13
0.41 1.75 -4.64 -1.85 -
0.53 1.83 - -6.71 -
0.5 1.84 - - -
0.63 1.72 - - -2.75
0.53 1.78 - -4.11 -4.03
0.67 1.59 -3.61 - -1.68
0.79 1.62 - -2.62 -5.0
0.3 1.85 - - -2.55
0.71 1.7 - - -2.98
0.63 1.76 -6.15 -5.16 -5.68
0.51 1.58 -3.05 -2.39 -1.84
0.52 1.57 -3.7 -3.7 -1.19
0.6 1.72 -6.69 -2.78 -4.7
0.7 1.68 - -4.46 -3.08
0.41 1.7 -6.68 -1.62 -3.55
0.55 1.71 -7.22 -2.71 -3.22
0.82 1.7 - - -
0.9 1.65 - - -
0.53 1.7 -5.94 -1.89 -5.46
0.86 1.56 -3.17 -2.97 -
0.71 1.3 - -1.3 -1.02
Ppi_g07576 (HA6)
 0.5 1.54 -5.12 -1.74 -1.47
0.77 1.72 - - -
0.54 1.58 - -1.14 -3.34
0.61 1.44 -3.88 -1.5 -1.56
0.83 1.64 - -4.27 -4.26
0.36 1.84 -4.8 -6.33 -3.7
0.23 1.82 -5.05 -3.48 -2.54
Ppi_g09888 (mMDH2)
 0.41 1.52 -1.71 -2.06 -1.91
0.18 1.83 - -2.71 -2.78
0.52 1.82 - -6.02 -5.74
0.46 1.86 - - -
0.52 1.56 -4.6 -1.71 -1.87
Ppi_g11215 (GLY2)
 0.8 1.62 - -2.59 -5.33
0.8 1.69 - -4.91 -
0.34 1.85 - - -3.0
0.44 1.77 -4.03 -4.03 -3.36
0.59 1.81 - - -
0.88 1.63 - - -4.28
0.55 1.66 - - -1.4
0.82 1.69 - - -
0.45 1.81 -6.84 -3.17 -5.91
0.79 1.71 - - -
Ppi_g13388 (MSRB3)
 0.52 1.7 -3.15 -5.42 -2.55
0.2 1.72 - -2.08 -1.63
0.59 1.63 -5.73 -2.21 -2.66
0.59 1.59 -2.79 -2.57 -2.59
0.63 1.67 -5.86 -2.31 -4.35
Ppi_g14081 (SAG24)
 0.22 1.47 -5.35 -1.03 -0.87
0.71 1.64 -2.99 -4.06 -4.06
Ppi_g14163 (PER1)
 0.52 1.54 -3.19 -1.01 -4.6
0.41 1.78 -5.09 -3.19 -3.35
0.75 1.56 -3.57 -2.07 -4.65
0.77 1.68 - -3.52 -
0.6 1.8 - - -
0.63 1.71 -5.75 -3.32 -3.83
0.83 1.67 - -4.71 -
0.73 1.51 - -3.63 -1.3
Ppi_g15811 (CAM6)
 0.78 1.49 - -2.43 -1.78
0.64 1.62 -3.1 -2.02 -
0.42 1.83 -3.91 -6.42 -5.0
0.61 1.77 - -3.88 -
0.16 1.67 -3.49 -2.06 -1.44
Ppi_g16263 (CYTC-1)
 0.56 1.63 -4.36 -2.18 -2.63
0.67 1.6 - -2.04 -2.98
Ppi_g16332 (CSD1)
 0.33 1.73 -4.72 -1.8 -3.22
0.73 1.65 - -2.72 -4.29
Ppi_g16445 (RPS15)
 0.61 1.44 -5.18 -1.27 -1.67
0.74 1.67 -5.76 -3.1 -5.85
0.49 1.68 -5.57 -3.19 -1.95
Ppi_g16803 (APA1)
 0.61 1.76 -6.21 -4.11 -5.29
0.32 1.85 - - -2.84
0.82 1.43 - - -0.89
0.92 1.63 - -5.54 -
Ppi_g17904 (NAD7)
 0.14 1.73 -3.39 -2.32 -1.84
0.61 1.79 - - -
0.73 1.69 -5.53 -3.86 -5.62
0.78 1.6 - -2.2 -5.13
0.56 1.73 -4.45 -2.87 -4.78
0.47 1.85 - - -
0.34 1.84 - -3.27 -4.27
0.64 1.63 - -1.51 -
0.29 1.84 - - -2.26
0.63 1.68 - -3.38 -2.76
Ppi_g20090 (CPN10)
 0.18 1.73 - -1.45 -2.37
0.56 1.5 - -1.55 -1.52
0.79 1.71 - - -
0.44 1.63 -3.34 -1.9 -2.42
Ppi_g20498 (RPL27A)
 0.86 1.43 - - -1.02
0.6 1.59 - -2.06 -2.14
0.55 1.53 -4.54 -0.88 -4.25
0.33 1.69 - -1.28 -3.31
0.5 1.7 - -2.08 -3.5
0.6 1.78 -5.09 -5.18 -
Ppi_g53358 (CAT1)
 0.72 1.7 - -3.59 -5.21
Ppi_g53830 (ALDH2)
 0.65 1.63 -5.05 -3.01 -2.45
0.67 1.77 - - -
Ppi_g54375 (ACS)
 0.8 1.54 -4.51 -2.17 -3.59
0.49 1.76 - -2.44 -5.63
0.46 1.86 - - -
0.58 1.81 - - -
0.29 1.79 -8.24 -2.34 -3.2
0.66 1.74 -6.37 -4.72 -4.91
0.61 1.68 - -2.38 -3.54
0.64 1.68 -5.08 -2.19 -
0.41 1.84 -6.52 -5.34 -4.15
0.79 1.68 - - -3.89
0.54 1.78 - -2.99 -
Ppi_g58691 (MLS)
 0.52 1.72 - -2.4 -3.62

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.