Heatmap: Cluster_224 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Sterile Frond
Fertile Frond
Young Stem with Root
Mature Stem with Root
Root
-1.43 0.15 - 1.77 -3.24
-0.24 -1.26 - 1.75 -1.4
-1.52 -0.05 -5.76 1.81 -2.55
-1.35 -0.8 - 1.96 -2.75
Ppi_g11724 (CAT1)
-1.61 -0.73 - 1.95 -2.33
- -0.19 -1.9 1.92 -4.09
Ppi_g14050 (UBC30)
-1.5 -0.53 -5.48 1.72 -0.64
-0.4 -0.12 - 1.67 -2.93
-2.97 -0.28 - 2.0 -4.18
- -0.18 -2.63 1.92 -2.52
-0.7 -0.19 - 1.76 -2.93
-1.1 -0.32 - 1.81 -2.18
-0.82 -0.49 -4.52 1.63 -0.78
- 0.26 -4.34 1.87 -3.22
-3.02 -0.02 - 1.87 -2.11
- 0.43 - 1.83 -3.39
-1.04 -0.45 - 1.8 -1.7
-2.8 -0.21 - 1.86 -1.52
-1.51 -0.39 - 1.93 -3.54
Ppi_g21462 (CEN2)
- -0.02 -3.5 1.82 -1.38
- 0.04 - 1.86 -1.59
-3.45 0.05 - 1.94 -5.1
-1.18 -0.97 - 1.84 -1.06
Ppi_g21906 (UBQ11)
-0.92 -0.25 -6.92 1.7 -1.46
-1.24 -1.07 - 1.94 -1.99
Ppi_g22192 (HSP70)
-1.0 -0.33 -3.34 1.58 -0.68
- -0.63 - 1.85 -0.41
- 0.04 - 1.92 -2.43
Ppi_g23068 (GRF2)
-0.89 -0.75 -6.04 1.64 -0.44
-1.52 -0.42 -2.88 1.75 -1.35
-1.29 -1.15 - 2.01 -2.98
-0.49 -0.9 - 1.74 -1.28
- -0.03 - 1.87 -1.4
- -0.26 -1.51 1.82 -1.79
- 0.07 - 1.98 -
-1.41 -0.41 - 1.79 -1.24
-0.85 -1.27 -4.41 1.69 -0.42
Ppi_g25242 (RCI1)
-0.72 -1.73 -1.92 1.61 -0.37
-1.37 -0.56 -3.45 1.69 -0.71
- 0.16 -3.78 1.83 -1.99
- -0.34 -1.76 1.97 -
Ppi_g27079 (ATP1)
-0.62 -0.42 - 1.65 -1.07
- 0.18 -1.7 1.76 -2.6
- -0.11 - 1.99 -3.42
Ppi_g27796 (CAB3)
-4.4 -0.23 -1.93 1.79 -1.4
Ppi_g27843 (AAC3)
- -0.0 -5.23 1.81 -1.08
- 0.02 -3.34 1.93 -3.82
- 0.07 -2.22 1.77 -1.66
-1.66 -0.24 - 1.87 -2.38
Ppi_g28475 (CYTC-2)
-0.84 -0.47 -1.61 1.56 -1.16
Ppi_g28519 (MSD1)
-1.12 -0.95 - 1.96 -3.04
-0.72 -1.25 - 1.92 -2.31
- 0.08 - 1.86 -1.73
Ppi_g29244 (CRT1b)
- 0.14 -3.14 1.68 -0.81
Ppi_g33779 (ATG8F)
- 0.12 - 1.93 -3.18
-1.3 -1.3 - 2.03 -3.44
-2.18 0.37 - 1.75 -3.1
-0.69 -0.06 - 1.61 -1.48
-0.96 -0.38 -8.13 1.83 -2.64
Ppi_g55062 (mMDH2)
-1.1 -1.1 -1.49 1.55 -0.36
Ppi_g57739 (CSD1)
-1.71 -0.65 - 1.97 -2.79
-2.04 0.33 -6.89 1.77 -3.46
-0.85 -0.69 - 1.88 -2.77
- 0.48 -3.21 1.78 -3.88

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.