Heatmap: Cluster_312 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d000124 (GRMZM2G016749)
-0.25 0.03 0.73 0.3 0.14 0.53 1.24 0.21 -0.17 0.04 0.69 0.17 -0.98 -0.42 -0.95 -0.12 -0.6 -0.03 0.12 -3.84 -1.55 -1.43 1.67 -0.48 -0.47 0.03 0.77 -0.23 -1.85 0.48 -0.17 -5.03 -1.02 -0.29 0.43 -0.1 -0.07
Zm00001d002589 (GRMZM2G164318)
-1.6 -2.91 -3.44 -1.99 -2.09 2.71 1.98 0.07 1.43 1.71 -0.91 1.24 -2.83 -2.58 0.58 -1.71 -1.46 -1.41 -1.88 -5.3 0.08 -1.13 0.48 -1.32 -0.33 -3.35 -1.31 -2.18 0.2 -2.75 -1.47 -0.05 -3.13 -2.27 -2.97 1.3 1.04
Zm00001d003044 (GRMZM5G845736)
-2.67 -3.13 -0.44 -1.13 -1.39 0.98 1.0 0.2 0.37 1.22 -1.07 0.97 -2.13 -1.14 -0.77 -0.97 -0.96 2.67 0.92 -4.65 -1.97 -0.84 -0.98 -0.41 0.12 1.66 -1.49 -0.42 -2.65 -2.36 -0.39 - -4.55 -1.0 -0.56 1.68 -1.19
Zm00001d003848 (GRMZM2G023946)
1.39 0.88 0.66 1.05 0.82 1.08 0.93 -0.32 0.58 0.69 0.12 0.56 -0.87 1.39 -0.19 0.47 -1.66 0.44 0.08 -3.45 -2.78 -2.36 1.07 -1.91 -0.39 -1.09 0.04 -0.83 - -7.3 -1.81 -4.36 -3.8 -1.94 -1.56 0.12 -0.38
Zm00001d006069 (GRMZM2G013781)
-1.35 -0.05 -4.28 0.6 -0.19 0.72 -1.03 - 0.38 0.43 1.14 1.54 - - -0.5 -4.0 -6.27 -0.68 -2.52 - -2.93 - 3.6 -4.15 -2.44 0.76 0.32 -0.27 - - -4.95 -0.38 -6.67 -3.66 -4.58 1.57 0.62
Zm00001d006446 (GRMZM2G180283)
-8.42 - -2.07 -3.37 -3.3 2.13 1.15 1.11 0.75 1.46 -5.36 1.26 -5.62 -2.0 0.85 -0.65 -2.01 1.42 1.02 -5.34 -2.17 -4.4 -3.05 -4.71 -0.8 2.63 -1.69 -2.21 - -3.44 -0.93 -5.45 -6.83 -3.92 0.8 1.21 -0.38
Zm00001d007403 (GRMZM2G151227)
- - -2.81 -3.39 -2.08 0.96 0.07 0.86 1.45 0.58 -4.88 2.07 - -3.59 -0.97 -2.65 - 2.81 2.9 -5.23 -3.56 -2.35 -3.07 - 0.52 1.91 - -3.74 -2.2 - -8.22 - -7.12 -6.87 -2.81 0.71 -1.8
Zm00001d009156 (GRMZM2G003417)
-0.37 0.49 -0.42 0.9 -0.49 0.94 1.21 0.12 -0.29 0.03 -0.01 0.27 -0.32 -1.23 -0.49 -0.74 -0.03 0.94 0.23 -1.18 -0.58 -1.11 0.72 -0.2 -0.28 -1.12 0.67 -0.23 -0.31 0.2 -0.32 -0.25 -0.53 -0.76 -0.6 0.21 0.01
Zm00001d010230 (GRMZM2G164797)
0.33 -0.06 1.04 0.08 0.1 -0.06 0.65 0.08 0.42 0.53 -0.24 0.06 -0.46 -0.25 -0.15 0.49 -0.37 -0.28 -0.16 -8.62 -0.88 -1.1 0.21 -0.72 -0.35 -0.6 0.26 0.55 -1.78 0.44 -0.01 -0.27 -0.11 0.41 0.01 0.51 -0.07
-5.32 - -1.23 -3.82 -0.98 1.23 2.03 -0.04 0.11 1.38 0.54 1.72 - -6.15 0.24 -6.51 -9.32 1.5 -0.57 -6.79 -7.01 -7.24 1.07 - 0.85 1.89 -1.32 -2.08 -0.6 -3.85 -5.53 -2.95 -5.93 -1.76 0.23 1.68 0.68
Zm00001d012780 (GRMZM2G044070)
1.55 -3.86 -6.32 1.78 1.05 0.91 1.93 0.96 -1.1 -2.67 -4.46 1.59 - -5.16 -0.3 -4.52 - -2.14 -1.5 -4.98 -7.86 - -3.23 - -0.31 3.46 -1.85 -6.14 - - -4.34 - -8.69 -4.24 -0.19 0.41 0.25
Zm00001d012884 (GRMZM2G134270)
-1.84 -0.07 0.21 0.23 -0.31 0.62 1.29 0.7 -0.16 0.23 -0.03 0.42 -0.95 -1.44 -1.16 0.08 0.9 -0.07 0.72 -3.04 -0.43 -0.45 0.3 0.01 -0.11 -0.07 0.44 -0.06 -1.71 0.15 0.43 -1.07 -0.63 -0.36 -0.51 0.23 0.22
Zm00001d014367 (GRMZM2G014508)
0.14 0.98 -0.22 0.72 0.21 0.41 0.7 0.45 -0.47 -0.21 0.35 0.39 -0.03 -0.47 -0.61 0.13 0.38 -0.4 -0.2 -5.43 -0.5 -1.14 0.28 0.03 -0.18 -0.26 0.83 -0.18 -2.18 0.14 0.4 -0.72 -0.7 -0.02 -0.39 0.13 -0.16
Zm00001d016841 (GRMZM5G836353)
-1.67 -2.19 0.23 3.28 0.16 -3.36 0.59 -1.1 1.29 1.07 -5.1 1.43 -7.59 -4.07 1.11 -3.32 -7.66 0.89 -2.79 -5.49 -2.58 -5.21 0.49 -8.93 -2.16 -2.74 1.23 0.39 -0.07 - -8.01 -1.76 -0.19 -1.64 -1.87 1.07 -1.65
Zm00001d017387 (GRMZM2G066851)
-5.67 -3.47 1.11 -6.0 0.64 0.55 1.56 -0.51 -1.12 -0.59 0.63 0.59 -0.4 -4.35 -0.49 -0.42 -0.85 0.55 -0.56 -6.99 0.4 -0.25 0.65 0.3 0.83 2.21 -0.7 -1.45 0.8 -0.17 -0.62 -1.84 -3.29 -0.01 -2.21 -0.11 -0.48
Zm00001d018325 (GRMZM2G008242)
-1.27 -0.29 -0.49 -1.01 -0.47 0.79 2.24 0.51 -0.28 0.03 0.69 0.76 -1.95 -1.4 -1.59 0.43 0.04 0.07 -0.44 -5.97 -0.74 -0.26 0.45 -1.07 0.09 -0.81 -0.84 -0.8 -1.71 1.44 0.83 -2.85 -2.15 0.13 -0.85 0.92 -0.12
-3.43 -2.1 0.53 - -2.67 0.83 0.63 1.14 1.75 3.41 - 1.0 - - 0.18 -0.8 -0.31 - -1.33 - -1.09 - 0.02 -0.35 0.0 - -0.82 -2.16 - - -1.12 - -3.52 -2.81 -1.62 1.78 1.08
Zm00001d020770 (GRMZM2G140559)
0.23 -1.16 0.57 -0.73 0.38 -0.94 0.33 -0.21 -0.16 -0.24 0.28 0.12 0.62 0.35 0.14 0.59 -0.29 0.27 -0.46 -4.65 -0.84 -0.73 -0.23 0.02 0.01 0.75 0.9 -0.38 0.97 -1.39 -0.26 -1.7 -1.31 0.35 0.49 0.44 -0.28
-2.81 -2.39 0.54 -0.15 0.2 -0.55 -1.02 -0.56 -0.74 -0.59 -0.26 -0.04 -1.05 0.75 -1.35 0.81 0.13 0.21 0.21 -5.8 -1.22 0.17 1.34 0.07 0.61 1.07 -0.68 -0.04 0.15 1.13 0.9 -1.22 -1.81 0.36 0.18 -0.01 -0.18
Zm00001d021979 (GRMZM2G057023)
-0.46 -0.08 0.42 -0.78 -0.29 1.09 2.37 0.14 -0.38 -0.08 -0.57 0.29 -0.74 -0.68 -1.1 -0.11 0.33 -0.38 -0.0 -2.88 -0.84 -0.78 0.51 0.01 -0.35 -0.26 -0.01 0.37 -3.44 0.44 0.31 -2.26 0.06 -0.05 -0.55 0.03 -0.52
Zm00001d022512 (GRMZM2G136794)
-0.24 -0.23 1.47 -1.99 -1.19 0.88 1.89 0.84 1.27 1.96 -0.13 0.86 -2.75 1.1 -1.01 0.36 -0.26 -1.0 -1.5 -10.85 -1.46 -1.93 -1.07 -1.15 0.33 -1.4 -1.48 -2.37 - -0.55 -0.07 -3.07 -4.0 -1.52 -1.56 1.47 -0.5
Zm00001d023277 (GRMZM2G151903)
-1.31 -0.77 0.48 -2.93 -0.69 0.13 2.1 0.51 0.79 1.29 -0.86 1.16 -1.33 -1.29 0.12 0.0 -0.21 0.4 -0.72 -4.36 -1.1 -1.7 1.02 0.75 0.54 -0.69 -0.56 -0.76 -0.9 -0.62 -1.37 -1.15 -2.06 -1.05 -0.63 0.96 0.27
Zm00001d023430 (GRMZM2G113228)
-0.63 -2.08 1.84 0.73 -0.7 0.81 1.08 0.64 -0.62 -0.14 0.06 0.64 -2.26 0.08 -1.82 -0.05 1.43 -0.81 0.56 -6.03 -1.14 -0.65 0.44 -0.81 0.12 1.07 -0.82 -0.4 - 0.88 -1.7 -1.48 -1.78 -3.02 -0.51 0.21 0.12
Zm00001d024702 (GRMZM2G005024)
-0.76 0.72 -1.07 0.57 0.16 0.39 0.68 0.06 0.35 0.55 -1.6 0.19 0.12 -0.83 -0.25 -0.94 -0.87 0.28 -0.41 -4.17 -0.77 -1.86 1.28 -0.8 -0.19 -3.67 1.9 0.27 - -0.08 0.44 -1.43 0.22 -0.62 0.15 0.17 0.54
Zm00001d026056 (GRMZM2G152135)
-5.68 -6.81 -3.91 -1.3 0.32 1.64 -0.04 1.23 0.17 0.32 -1.68 0.84 -2.64 -1.06 0.68 -1.74 -3.76 -0.23 -2.05 -8.15 -1.38 -2.4 -0.47 -2.92 -0.67 0.17 1.79 0.9 0.02 -1.12 1.12 -0.26 1.05 -0.62 0.45 0.47 1.11
Zm00001d027536 (GRMZM2G048740)
-2.47 -0.89 0.74 0.7 -0.46 1.17 1.58 0.47 -0.34 -0.08 0.45 0.35 -3.37 -0.59 -1.13 -0.21 -0.34 -0.53 -0.01 -2.51 -1.13 -1.79 1.85 -0.75 -0.55 -0.63 1.33 0.07 -2.12 -0.43 -0.4 -2.51 -0.5 -0.2 -0.08 -0.24 0.5
Zm00001d028054 (GRMZM2G004397)
0.39 -0.62 1.24 0.59 0.52 -0.16 0.84 -0.05 -0.34 -0.4 0.51 -0.08 -1.13 0.9 -0.36 0.26 -0.78 -0.41 0.06 0.4 -2.21 -1.75 0.9 -1.2 -0.79 0.07 -0.06 -0.44 -2.81 0.31 -0.04 -2.13 -0.64 -0.12 0.52 0.45 0.15
Zm00001d029324 (GRMZM2G075153)
-0.79 0.73 1.3 0.59 0.33 1.16 1.31 0.07 0.39 0.46 -0.27 0.56 -0.57 -0.33 -0.71 0.58 -0.23 -0.48 -0.32 -2.85 -0.07 -1.23 0.87 -0.99 -0.35 -1.44 0.33 -0.41 -1.07 0.21 -0.74 -1.36 -1.53 -1.31 -1.58 0.09 0.08
Zm00001d032391 (GRMZM2G006019)
- - - - - - - - - - - 3.05 - - 1.58 0.18 1.79 - -0.79 - - - - 3.26 -0.54 - - - - - - - - -0.85 -2.1 3.25 -
Zm00001d037382 (GRMZM2G162783)
-1.13 -6.66 -3.46 1.6 0.42 -0.36 0.81 0.65 -0.68 0.17 -2.56 0.23 -2.04 -1.16 -0.49 0.02 -1.49 0.35 1.22 0.74 0.95 1.1 - 0.02 0.8 0.97 -1.89 -0.01 - -1.88 -1.85 - -4.52 -2.11 1.05 0.67 1.19
Zm00001d037383 (GRMZM2G162755)
-6.22 -10.81 - -3.39 -2.01 1.11 1.07 1.84 1.15 1.61 -5.49 1.01 -8.64 - 1.72 -6.3 - 2.04 0.47 -7.15 -4.62 -4.95 -1.34 - -0.9 1.79 -3.71 -4.0 - -7.67 -7.81 - -8.85 -2.9 2.1 1.1 0.59
Zm00001d039141 (GRMZM2G163861)
0.46 -0.04 1.5 0.18 0.05 0.92 0.38 -0.27 -0.01 0.04 0.11 -0.33 -0.3 -0.17 -0.63 0.44 -0.4 0.01 0.04 -2.31 -0.97 -1.17 1.59 -0.47 -0.42 -0.99 -0.39 -0.07 -2.2 0.45 -0.05 -2.58 -0.5 -0.21 -0.57 0.54 -0.02
Zm00001d041341 (GRMZM2G129403)
- - - - -1.88 - 1.47 2.18 1.35 2.45 - 1.6 - - 0.56 -5.39 - - - - - - - - - - - -0.51 - - - - -1.68 -3.57 2.87 3.09 -
Zm00001d041763 (GRMZM2G083130)
-9.16 -7.15 -3.57 -3.31 -4.61 1.64 1.47 1.51 0.7 1.13 -1.17 2.41 -2.12 -2.65 1.15 -1.71 -5.95 -0.53 1.27 -7.07 -5.11 -5.65 2.51 -4.77 -1.07 0.05 -4.31 -2.32 - -6.01 -8.6 -4.23 -4.04 -3.84 0.87 0.83 0.14
Zm00001d043147 (GRMZM2G035709)
-1.37 -0.91 0.73 0.07 0.02 -0.01 1.02 -0.18 1.15 1.11 -0.01 0.68 0.25 -0.35 0.16 -0.01 -0.27 -0.21 0.55 -0.32 -1.44 -2.34 0.77 -0.88 -0.07 0.48 -0.72 -0.07 -1.76 -1.01 -0.99 -2.27 -0.42 -0.74 -0.04 0.7 0.36
Zm00001d043432 (GRMZM2G055857)
-1.84 -0.53 -0.52 0.57 -0.62 0.35 1.27 0.65 -0.29 -0.06 0.23 0.52 -0.52 -0.76 -0.59 -0.38 0.17 0.84 -0.1 -2.51 -0.12 -0.59 1.14 -0.43 0.48 0.12 0.45 -1.03 -1.64 0.21 0.24 -1.66 -2.25 -1.07 0.77 0.03 0.64
Zm00001d044339 (GRMZM2G071021)
0.19 -0.9 -3.29 2.28 0.7 -0.18 0.31 0.74 -0.08 -0.01 -4.94 -0.15 0.6 -1.25 0.56 -0.11 0.14 1.44 0.18 -9.38 0.11 -0.18 0.25 0.39 1.19 -0.47 -0.41 -0.8 -0.86 -2.73 -0.66 -4.99 -4.25 -1.3 -1.96 0.4 -0.69
Zm00001d044465 (GRMZM2G022279)
0.71 -0.16 -0.25 -0.32 -0.01 1.76 0.57 1.98 -0.05 0.37 0.65 0.39 0.5 -1.14 0.0 0.02 -0.37 0.19 -0.81 -1.84 -1.43 -1.25 1.88 -1.08 -1.17 -0.85 -0.51 -1.54 -3.31 -0.52 -1.85 -1.99 -2.13 -2.28 -0.35 -0.29 -0.23
Zm00001d047252 (GRMZM2G314769)
-1.73 -5.37 -5.04 0.63 -1.55 -0.11 0.17 1.02 0.46 0.71 -1.54 0.85 -6.64 - -0.01 -3.73 - 1.08 1.38 -7.08 -3.87 -5.28 -1.04 -11.57 1.03 3.74 -1.21 -1.8 -4.05 -6.67 -7.66 -5.16 -7.77 -3.8 0.42 0.15 -1.5
Zm00001d047452 (GRMZM2G167336)
-5.91 - -1.1 1.16 0.68 0.64 1.48 1.14 0.83 1.72 -2.79 1.86 -1.89 -4.32 1.69 -1.23 -8.79 0.15 0.23 -4.43 -4.33 -2.83 -0.69 -8.93 -1.17 2.28 -3.8 -3.63 - - -2.17 - -8.69 -5.65 0.72 1.02 -0.34
Zm00001d047749 (GRMZM2G118979)
0.23 -0.78 -0.46 -0.61 -0.75 1.09 1.29 0.1 0.18 0.24 -0.38 0.18 -2.04 -0.46 -0.04 -0.96 -0.8 -0.16 -0.83 -7.52 -0.88 -1.2 1.54 -1.22 -0.02 -0.37 -0.25 0.05 0.84 0.59 0.65 -1.01 -0.22 0.08 0.07 0.51 0.27
Zm00001d048907 (GRMZM2G456471)
0.39 0.69 -0.74 -0.12 0.22 0.67 1.09 0.32 -0.39 -0.35 -3.44 0.02 -0.03 -0.04 -0.47 -0.19 -0.47 1.14 0.61 -0.97 -1.09 -0.62 -1.09 -1.55 0.05 1.3 0.05 -0.49 -3.06 -0.32 0.77 -1.15 -2.36 0.53 -0.55 0.43 0.42
Zm00001d049092 (GRMZM2G104147)
1.02 -0.69 0.96 -0.21 -0.09 1.65 1.42 -0.05 -0.01 0.12 0.29 -0.11 -0.9 -0.78 0.03 0.29 -0.39 -0.2 -0.09 -8.42 -1.92 -1.6 0.66 -1.24 -0.31 -0.3 0.15 -0.34 - 0.73 -0.6 0.24 -2.39 -0.07 -1.52 0.92 -0.65
Zm00001d049910 (GRMZM5G801875)
-2.57 -2.75 -3.34 -0.27 -1.84 0.96 0.38 0.25 -0.48 -0.06 -0.38 0.81 -1.61 -0.62 -0.52 -0.33 0.16 1.38 2.08 -8.21 -1.65 -2.49 1.21 0.46 0.24 2.59 -1.96 -0.81 -0.55 -3.07 -3.26 -2.03 -4.02 -1.76 -0.85 0.24 -0.06
Zm00001d050955 (GRMZM2G313750)
-1.62 -0.09 -0.97 - -1.4 -2.9 -0.17 0.35 0.43 1.46 -1.57 0.33 -0.72 - -0.22 -1.2 0.05 0.51 1.49 1.64 -2.17 -0.51 1.69 0.97 -0.35 - -0.87 -0.61 1.96 - -1.83 1.02 -1.49 -0.9 -3.76 -0.09 -1.42
Zm00001d051529 (GRMZM2G054013)
1.37 -0.02 -1.04 -1.39 -0.3 1.13 1.23 0.53 -0.08 0.37 -3.45 0.47 0.81 -1.01 0.36 -0.92 -0.72 0.68 1.77 -2.55 1.02 0.16 -0.01 0.77 0.19 0.7 -0.02 -1.99 -3.6 -4.98 -1.44 -2.86 -6.41 -3.57 -3.31 0.05 -0.97
Zm00001d052673 (GRMZM2G422750)
-7.11 - -0.72 -0.82 -1.03 1.89 1.14 0.64 1.85 1.6 -1.99 1.51 -6.72 -0.58 0.86 -3.43 -7.94 1.13 0.99 -6.86 -4.22 -5.41 0.38 -6.12 -1.86 2.12 -1.08 -2.03 -4.91 -8.21 -4.41 -8.43 -7.23 -2.61 -2.04 1.62 0.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.