Heatmap: Cluster_84 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
Pp3c10_17004V3.1 (Pp3c10_17004)
- -0.73 0.23 -0.08 -2.17 -1.3 -1.8 -2.36 -1.26 -0.46 -7.5 - -1.61 -2.61 0.1 - 0.25 -1.6 -1.44 -0.67 -3.23 -1.64 -3.41 -3.38 4.47 2.37 3.4 -5.24 -8.05 -6.37 -6.49 -7.65 - -7.68 -7.84 -7.64 -6.58 -2.37 - -7.73 - - - - -7.06 -2.25 -6.28 -
Pp3c10_22860V3.1 (Pp3c10_22860)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c11_11710V3.1 (Pp3c11_11710)
- - - - - - - - - - - - - - - - - - 2.99 0.99 2.07 - 1.77 - 4.93 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c11_14310V3.1 (Pp3c11_14310)
-4.08 -1.82 -1.3 -3.4 -3.55 -0.18 -1.01 -0.48 -0.46 -3.12 -7.42 -5.54 -2.69 -2.07 -2.54 1.13 0.1 2.33 -2.15 0.75 2.21 3.73 -6.95 1.14 2.25 -4.18 -1.55 -1.65 -2.73 -1.75 -0.1 -8.33 -2.17 -1.7 -2.23 -3.15 -2.67 -3.6 -4.72 0.04 0.03 0.14 -0.75 -2.61 -4.81 -3.68 -2.07 -0.04
- 3.08 - - - -0.27 -1.47 - - -2.8 - -1.37 -3.0 - -3.41 -1.97 - -1.27 - - 0.66 - - 1.38 4.75 -1.51 2.2 -2.46 - -4.75 - - -4.55 -2.34 - - - - - - -2.18 - - - - -2.68 - -
Pp3c11_2260V3.1 (Pp3c11_2260)
- - - - - - - - - - - - - - - - - - - - - - - 2.25 5.43 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c12_11480V3.1 (Pp3c12_11480)
- -5.59 -4.44 -4.02 -5.95 - - - - 0.15 -0.3 -0.47 0.2 -0.12 -1.41 0.02 -4.4 -1.74 - -3.26 -3.14 1.12 - -1.13 4.98 -1.24 2.21 - - -7.46 -4.32 -3.33 -6.56 - - - - -1.5 -5.19 -1.42 - -5.51 -1.1 -2.66 -4.29 -1.62 -4.52 -
Pp3c12_17400V3.1 (Pp3c12_17400)
- 2.52 - - - - - - - - - - - - - - - - - - - - - 3.22 5.04 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c12_18880V3.1 (Pp3c12_18880)
- - - - - - - - - - - - - - - - - - - - - - - - 4.81 - - - 3.29 - - - - - - - - - - - - - - - - 3.35 - -
Pp3c12_25810V3.1 (Pp3c12_25810)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c12_6100V3.1 (Pp3c12_6100)
-2.08 -0.92 0.75 -0.98 0.35 1.02 1.62 2.32 - 0.79 -1.2 2.06 0.78 -0.33 -1.15 - - -0.19 - -0.78 -1.75 - - 0.74 0.83 -2.11 1.84 -0.16 0.22 -0.64 0.12 -0.26 -1.11 -0.84 -0.91 -1.99 -2.15 0.43 - -0.28 1.55 0.15 -1.77 -0.41 - -0.21 - -0.78
Pp3c13_18840V3.1 (Pp3c13_18840)
- - - - - - - - -0.77 -0.61 -0.66 - - - - - -0.2 0.81 - - - - - 2.03 4.01 1.37 3.08 - 1.11 -1.05 - 0.16 -1.36 - -0.84 - -0.39 -0.13 - - -0.16 - 0.76 - -0.91 -0.66 -0.18 0.26
- - -6.28 -9.55 -4.0 -2.49 -7.18 -3.08 -1.67 -0.98 -3.51 -3.02 -2.2 -1.95 -6.04 -3.03 0.3 2.7 1.46 1.49 1.1 3.36 -1.03 1.51 3.75 -1.2 -0.4 -9.17 -9.45 -1.49 -8.11 -6.46 -9.72 - -9.1 -8.3 -9.35 -0.23 - -8.52 -3.69 -5.3 -6.0 -4.81 -8.83 -0.2 -4.92 -7.56
Pp3c13_6110V3.1 (Pp3c13_6110)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c15_22270V3.1 (Pp3c15_22270)
- - - - - - - - - - - - - - - - - - - - - - - 3.45 5.21 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c15_22540V3.1 (Pp3c15_22540)
-3.16 -1.28 -1.2 -2.71 -1.47 -1.08 -1.04 -1.24 -0.93 -2.03 -8.57 -7.69 -1.93 -1.73 -1.65 -2.63 0.02 1.99 -1.02 0.71 1.37 3.68 -1.43 -0.16 3.27 -0.98 -0.41 -1.65 -0.56 -0.37 -1.79 -4.97 -1.57 -0.37 -2.15 -1.25 -2.64 -0.69 -1.11 -1.11 -1.88 -1.15 -1.95 -2.0 -1.11 -0.74 -1.26 -1.36
Pp3c16_11650V3.1 (Pp3c16_11650)
- - - 0.4 - - - - - - - - - - - - 1.56 0.97 - - - - - 0.68 5.33 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c18_16221V3.1 (Pp3c18_16221)
- - 2.39 - - - - - - - - -0.18 - - - - 0.44 - - - - - - 2.68 4.84 2.11 - - - - - - - - - - - 0.17 - - - - - - - - - -
Pp3c19_14240V3.1 (Pp3c19_14240)
- -5.36 - -5.64 -7.89 -7.62 -9.56 -7.79 - -7.71 -9.52 -8.97 -10.77 -11.61 -10.75 -5.37 -4.3 0.73 -2.44 -3.79 -3.69 -3.17 -6.31 -2.38 5.02 2.76 2.61 -6.81 -7.46 -3.22 -12.91 -7.95 -8.87 - -9.95 -6.8 -7.09 -10.36 -11.22 -9.52 - - -10.9 -7.34 - -10.33 -9.62 -
Pp3c19_3939V3.1 (Pp3c19_3939)
-3.05 -0.58 -2.3 -0.76 -2.89 -0.65 -2.59 0.58 - -2.17 -3.04 - -0.94 -2.76 -2.37 1.14 -0.39 -0.62 - - - - - -1.78 4.8 0.92 3.14 - -3.46 -4.3 - - - -3.09 - - - - - - - - - - - - - -4.61
Pp3c19_9990V3.1 (Pp3c19_9990)
- - - - - - - - - - - - - - - - - - - - - - - - 5.28 - 3.21 - - - - - - - - - - - - - - - - - - - - -
Pp3c1_11610V3.1 (Pp3c1_11610)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_12640V3.1 (Pp3c1_12640)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_12650V3.1 (Pp3c1_12650)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
- 1.95 -0.41 - 0.51 -2.62 -3.16 -2.36 - -1.42 - -1.48 -2.48 -1.89 -1.27 - 0.35 1.38 -1.54 0.05 -0.56 -0.09 - -1.17 4.09 0.77 2.66 -2.45 -0.67 -2.33 -2.21 -2.48 -1.71 -1.25 -1.9 -1.85 -1.97 -1.56 -3.43 -1.38 -1.31 0.36 -1.29 -1.88 -1.19 -1.62 -2.18 -1.19
Pp3c1_6630V3.1 (Pp3c1_6630)
- - -1.02 -1.76 - - - -0.68 - -3.49 -0.37 -0.17 -1.96 - -2.68 - - -0.1 - - -0.43 -1.29 - -2.31 4.49 1.19 3.56 -2.15 - -3.21 -2.44 - -3.33 - - - - - - -0.23 -1.92 -0.51 -2.0 0.3 0.3 - -1.08 -
Pp3c22_1050V3.1 (Pp3c22_1050)
- - - - - - - - - - - - - - - - - - - - - - - - 4.68 4.48 - - - - - - - - - - - - - - - - - - - - - -
Pp3c22_12990V3.1 (Pp3c22_12990)
-1.44 0.19 -2.02 -1.69 0.06 -0.71 0.73 0.39 -0.7 -2.08 -3.88 - - -2.6 -3.07 -0.59 -0.65 -3.87 - -2.62 - -3.75 - -0.96 4.9 1.22 1.61 -2.49 -1.47 -3.21 -2.59 -2.91 -4.79 - -2.5 - -2.84 -1.68 - -3.37 - -3.72 -3.89 -4.16 - -1.19 -2.1 -2.45
Pp3c22_13039V3.1 (Pp3c22_13039)
- - - - - - -3.2 - - -6.38 - -3.93 -3.06 - -8.13 - - - - -4.07 - - - - 5.4 0.22 1.95 - - -5.45 -4.71 -5.25 -8.09 - - - - - - -4.75 - - -4.13 -4.98 - -5.49 -4.87 -6.84
Pp3c22_3662V3.1 (Pp3c22_3662)
- -1.75 -1.3 -1.38 -5.79 1.01 0.36 - -2.43 - - - - - -7.82 0.45 0.11 -2.35 - - - - - -4.22 4.62 0.37 3.85 - - -7.2 - -4.97 -5.67 - - - - - - - - - -1.87 - - - - -
Pp3c22_7590V3.1 (Pp3c22_7590)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c23_14080V3.1 (Pp3c23_14080)
- - - - -1.6 - - - - -2.2 - - - - - - - -3.17 -1.34 0.72 -2.25 -0.46 - 1.79 4.68 -2.58 3.88 - - - - - - - - - - - - - - - - - - -2.59 -2.4 -
Pp3c23_16850V3.1 (Pp3c23_16850)
- - - 2.24 - - 3.31 - - - - - - - - - 3.52 - - - - - - - 3.68 - - - - -0.12 - 3.03 - - - - - - - - - - - - - - - -
Pp3c25_11420V3.1 (Pp3c25_11420)
-3.74 - - - -4.7 - - - - - - - - - - - - 2.52 - 0.96 2.02 2.71 - 1.59 4.71 - -1.45 - - - - - - - - - - - - - - - - - - - - -
Pp3c25_13070V3.1 (Pp3c25_13070)
- -0.0 -2.69 -2.99 -3.4 1.28 -0.88 -0.52 - -0.38 -3.35 -3.1 -0.66 -1.87 -1.12 - -2.79 1.82 1.87 -1.42 -1.19 0.35 - 0.98 4.29 -2.33 -1.48 -4.19 -0.61 -1.55 -2.61 - -1.71 -2.94 -0.84 -3.11 -2.63 -0.02 -1.75 -2.34 0.5 0.01 -2.41 -0.25 -2.06 -0.02 -2.64 -1.73
Pp3c26_5450V3.1 (Pp3c26_5450)
-6.4 - -3.02 - -8.51 -4.59 -5.68 -1.97 -7.15 -6.15 -1.95 -1.64 -6.84 -5.54 -4.61 -1.08 0.66 0.93 2.4 3.05 2.18 3.75 -0.09 -3.73 2.68 -0.94 0.33 -3.1 -3.46 -3.58 -3.11 -2.32 -4.06 -3.65 -0.5 -3.41 -3.38 -5.81 -4.85 -5.63 -5.43 - - -5.85 -7.42 -4.81 -5.03 -1.59
Pp3c26_9808V3.1 (Pp3c26_9808)
- - - - - - - - - - - - - - - - - - - - - 2.37 - - 4.83 2.56 3.1 - - - - - - - - - - - - - - - - - - - - -
Pp3c2_2900V3.1 (Pp3c2_2900)
- 2.55 0.24 1.08 -4.49 - - - - -3.57 - - -0.16 -0.22 -5.94 - -0.72 -3.5 - 1.16 -0.08 2.56 - - 4.49 -0.84 1.64 - - - - - - - - - - - - - - - - - - - - 0.06
Pp3c2_32300V3.1 (Pp3c2_32300)
- - - - - - - - - - - - -0.01 -0.52 -3.43 - - - - - - - - - 5.35 0.86 - - - -1.99 - - -2.35 - - - -1.11 - - - -1.3 - -1.81 - - - - 0.93
Pp3c2_37516V3.1 (Pp3c2_37516)
1.46 -1.82 1.13 -3.39 - - - - - -1.97 -3.1 -3.39 - - -1.71 3.69 0.96 2.23 - - - -2.09 - -1.65 4.26 0.28 - - - -4.01 - - -3.12 -3.28 -2.94 -1.08 - - - - - - -2.81 -1.93 - -3.26 - -4.93
- 1.19 -1.16 - -4.51 -3.5 -2.22 -1.93 - -4.48 - - -4.93 - -3.13 - -0.77 0.62 -2.58 - - -1.38 - -0.05 4.76 1.48 3.41 - -4.67 -4.29 -6.32 - - - -5.55 -5.63 - -4.19 - - - -5.49 - - -4.62 -5.36 - -5.87
Pp3c3_34390V3.1 (Pp3c3_34390)
0.24 -1.03 -4.8 -4.29 1.47 0.69 -0.43 0.08 0.53 -1.78 -2.27 -2.52 -2.46 -3.37 -2.36 1.15 -5.32 1.48 -4.54 -4.76 -4.72 -0.75 -8.84 1.26 4.62 -7.04 1.88 -7.72 -9.1 -3.88 -4.1 -2.93 -5.75 -10.81 -9.94 -6.85 -7.18 -3.24 -6.68 -3.89 -11.67 -8.08 -2.74 -3.7 -4.07 -2.98 -4.3 -7.86
Pp3c4_16620V3.1 (Pp3c4_16620)
- - - - 0.63 2.38 - 3.37 - - - - - - - - - - - - - 1.75 - - 4.62 - - - - - - - - - - - - 1.62 - - - - - - - - - -
Pp3c4_21900V3.1 (Pp3c4_21900)
- - - - - - - - - - - - -3.35 - - - - - - - - - - - 5.41 - 1.89 - - -6.27 -3.05 -2.13 - - - - -2.99 -1.94 - -2.53 - - - -1.37 -3.28 - -2.84 -
Pp3c4_2630V3.1 (Pp3c4_2630)
-0.65 0.12 0.07 -1.47 -0.52 0.72 0.04 0.8 -0.93 -0.08 -1.88 -1.69 -0.83 -0.62 -0.35 -0.31 0.23 -1.98 -1.46 -0.21 -0.09 -0.64 -2.54 -4.3 3.72 -1.17 -0.68 0.36 0.22 -0.88 -0.48 -0.35 -0.19 -0.25 -0.33 0.02 0.37 0.12 -1.32 -1.24 -1.42 -0.86 -0.97 -0.24 -0.5 -0.24 -1.01 -0.73
Pp3c4_390V3.1 (Pp3c4_390)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c4_7950V3.1 (Pp3c4_7950)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c5_20580V3.1 (Pp3c5_20580)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c5_25210V3.1 (Pp3c5_25210)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c6_14460V3.1 (Pp3c6_14460)
- - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c6_18060V3.1 (Pp3c6_18060)
- - - - - 2.31 2.54 3.28 - - - - - - - - - - - - - - - - 3.53 - - - 2.74 -0.29 - - 0.4 - - - - - - - 2.83 - - - - - - -
Pp3c6_18220V3.1 (Pp3c6_18220)
- - - - - 2.88 - - - - - - - - - - - 2.98 - - - 3.03 - 2.02 4.36 - - - - - - - - - - - - - - - - - - - - - - -
Pp3c6_26470V3.1 (Pp3c6_26470)
- - -5.05 -2.57 - -4.48 - - - -6.62 - - - - - - -5.35 0.89 - - - -3.75 - 2.96 5.0 2.31 -0.09 - -5.51 - - - - - - - - - - - - - - - - -5.48 - -5.31
Pp3c9_12840V3.1 (Pp3c9_12840)
- - 1.5 - - - - - - - - - - - - - - 3.31 - - - - - 3.64 4.51 - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.