Heatmap: Cluster_132 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
Pp3c10_19860V3.1 (Pp3c10_19860)
- - - - - - - - - - - - - - - - 2.84 - - - - - - - - 4.85 - - 3.6 - - - - - - - - - - - - - - - - - - -
Pp3c10_4591V3.1 (Pp3c10_4591)
- -1.08 -1.11 - -4.57 1.3 0.47 1.4 0.83 -0.9 -0.91 0.47 0.27 -2.14 -1.56 - -0.26 - - -1.38 -0.44 -1.73 -2.55 - -0.64 3.1 2.93 -3.05 -2.29 0.6 -1.63 -1.35 -3.49 - - - - 1.34 - 0.53 0.72 -0.15 -0.05 1.06 -3.49 1.07 -0.45 -2.76
Pp3c11_24770V3.1 (Pp3c11_24770)
- - - -3.78 - -0.37 -0.41 -2.47 -1.26 -2.51 -3.5 -0.88 -3.95 - -1.91 - -1.69 0.49 - - - -3.12 - - 2.37 3.09 4.39 -3.09 -1.22 -0.86 -1.49 -3.8 -2.18 - - -0.02 -2.94 -0.76 -2.69 0.22 -0.32 -2.29 -2.21 -3.01 -2.41 -0.61 - 0.35
Pp3c11_9490V3.1 (Pp3c11_9490)
- - - - - - - - - - - - - - - - 3.46 - - - - - - - - 5.21 - - - - - - - - - - - - - - - - - - - - - -
Pp3c14_10090V3.1 (Pp3c14_10090)
-1.16 -2.29 -1.33 -2.92 -5.14 -3.65 -3.12 -2.93 -1.21 -6.37 -8.05 -6.89 -5.83 -7.92 -7.35 0.41 -1.56 -1.32 -3.68 -3.66 -3.72 -5.4 -4.77 0.33 2.44 3.98 4.4 -9.12 -8.07 -9.63 -11.39 -7.46 - - -8.43 -8.71 -11.79 -10.9 -12.55 -9.95 -11.2 -12.33 -10.88 -10.94 -13.74 -11.08 -13.3 -13.54
Pp3c14_20782V3.1 (Pp3c14_20782)
- - - - 4.14 - - - - - - - - - - - - 3.55 - - - - - - - 4.22 - - - - - - - - - - - - - - - - - - - - - -
Pp3c14_4790V3.1 (Pp3c14_4790)
-0.56 0.32 0.25 -1.45 1.34 -0.01 -0.08 -0.42 -0.12 0.38 -4.76 -5.43 -0.11 -2.03 0.98 -0.71 -0.71 -2.8 -0.7 -1.15 -1.69 -0.99 -0.89 -3.41 1.77 3.02 4.03 -6.06 -5.55 -4.51 -5.44 -5.51 -6.22 -6.98 -4.8 -7.42 -6.27 -1.84 -6.14 -1.73 -6.15 -4.39 -0.93 -1.71 -5.4 -1.63 -5.62 -5.74
Pp3c14_7910V3.1 (Pp3c14_7910)
- - 0.54 2.22 1.09 - - - - - - - - - - 3.27 3.52 2.07 - - - - - - - 3.84 - - - -3.01 - - - - - - - - - - - - - - - - - -
Pp3c15_11370V3.1 (Pp3c15_11370)
- - -8.14 - - -4.61 -5.25 - - -1.61 -0.89 -1.23 -0.24 -3.06 -0.76 - -5.07 -6.06 - -4.75 - - - -8.91 1.44 3.17 4.16 -0.15 -4.97 0.58 0.1 2.11 -1.84 -1.98 -0.0 -2.48 -1.03 -3.09 - -1.39 0.12 -0.39 -1.78 -0.54 -3.83 -2.39 -0.4 -0.0
Pp3c15_11490V3.1 (Pp3c15_11490)
- 3.98 - - - - - - - - - - - - -2.05 - - - - - - - - - - 4.37 - 2.44 - - - - - - - - - - - - - 2.55 - - - - - -
Pp3c16_20740V3.1 (Pp3c16_20740)
-2.85 -4.43 -3.46 -1.55 -4.9 -5.7 -7.25 -6.18 -2.05 -5.95 0.19 0.29 -5.07 -5.37 -8.54 -4.26 -5.83 -8.03 -4.17 -4.91 -5.37 -7.37 -3.58 -8.9 1.81 3.89 4.55 -9.65 -7.59 -5.42 -13.35 1.37 -9.88 - -8.3 -8.41 - -9.82 - -8.67 -9.84 -11.08 -12.34 -12.62 -8.44 -9.91 - -7.18
Pp3c18_13471V3.1 (Pp3c18_13471)
0.24 1.9 1.34 -1.59 -2.78 -2.93 -2.3 -2.52 -5.85 -5.21 -2.51 -2.12 -2.63 -4.37 -5.0 0.37 -1.6 2.16 -2.91 -3.54 -4.32 - 2.11 0.37 0.66 4.2 1.58 - -2.78 -0.91 -3.09 -3.84 -3.02 -4.39 -5.45 -5.18 -2.84 -3.31 -4.07 -1.42 -5.25 -4.49 0.3 -1.51 -3.46 -2.09 -2.51 -3.25
Pp3c19_6229V3.1 (Pp3c19_6229)
-10.58 - -8.05 -7.57 -13.31 -11.41 - -12.12 -13.39 -12.86 - -13.44 -5.84 -9.32 -13.01 - -9.53 -10.27 - - - - -11.74 - -2.4 5.4 2.49 -11.33 -9.25 -11.97 -11.78 -9.4 -12.36 - -10.91 -10.71 -12.12 - - -13.38 - -12.95 -13.29 - - - - -13.33
Pp3c19_6230V3.1 (Pp3c19_6230)
- - - - - - - - - - - - - - - - 2.96 - - - - - - - - 5.33 - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_10611V3.1 (Pp3c1_10611)
- 2.53 - - - - - - - - - - - - - - 2.72 - - - - - - - - 5.16 - - - - - - - - - - - - - - - - - - - - - -
Pp3c1_20151V3.1 (Pp3c1_20151)
- - -1.63 - -2.69 -2.87 - -2.17 - -1.53 -3.5 -2.34 -2.94 -2.19 -2.26 - -2.52 - - - - -1.92 -2.59 -2.44 -0.09 3.08 2.27 -2.09 0.17 1.06 -0.57 -3.8 -4.5 -1.81 -3.84 - - 0.57 -1.18 2.41 2.97 2.42 1.48 -0.58 -1.77 -0.31 -1.28 -0.03
Pp3c1_27670V3.1 (Pp3c1_27670)
- -0.55 -2.31 -1.46 -1.24 -0.21 -0.66 0.38 -4.08 -4.28 -4.77 -3.47 -1.9 -4.63 -3.85 -0.6 1.24 0.17 -0.68 1.22 2.62 0.94 -1.14 -4.41 2.5 3.37 3.37 - -4.55 -2.67 - -3.87 -6.15 - -5.05 - -5.8 -3.29 - -3.46 -5.34 -3.96 -3.45 -3.11 - -4.85 - -
Pp3c1_28680V3.1 (Pp3c1_28680)
-6.79 - -8.86 -6.16 -7.12 -5.78 -7.21 -5.93 -5.3 -3.11 -0.91 -0.22 0.17 -1.47 -3.54 -9.44 -4.27 -2.39 -5.1 -5.23 - -9.56 -6.87 -4.22 2.54 3.51 4.5 -7.89 -7.75 -0.83 -8.14 0.41 -7.52 -7.9 -7.92 -8.32 -8.3 -5.89 -6.34 -2.28 0.93 -1.42 -5.23 -5.4 -7.64 -5.68 -9.29 -3.4
Pp3c1_36690V3.1 (Pp3c1_36690)
- - - - - - - - - - - - - - - - 2.91 - - - - - - - - 5.34 - - - - - - - - - - - - - - - - - - - - - -
Pp3c20_7670V3.1 (Pp3c20_7670)
- - - - 4.55 - - - - - - - - - - - - - - - - - - - - 4.62 - - - - - - - - - - - - - - - - - - - - - -
Pp3c21_14110V3.1 (Pp3c21_14110)
- -3.06 2.04 - -1.76 - 0.43 -0.59 -0.26 -0.64 -2.1 -1.58 -2.41 -1.31 -3.48 2.11 0.79 -0.65 -1.24 -1.43 -0.9 -2.09 -0.49 3.26 0.28 3.72 - -1.86 -1.97 -0.69 -1.05 -8.81 -2.72 -2.24 -3.55 -1.98 - -0.64 -2.66 -0.22 - -3.79 -9.02 -6.25 -3.77 0.58 -4.13 -3.21
Pp3c22_20760V3.1 (Pp3c22_20760)
-2.17 -2.57 -1.8 1.9 -0.05 0.22 0.17 0.45 -1.36 -5.25 -0.07 -0.39 -2.34 -4.94 -8.47 -4.21 -4.66 -0.85 -4.66 -4.66 -6.53 -3.49 -7.99 -6.31 2.38 3.51 4.25 -8.99 -8.18 -6.57 -8.25 -6.57 -9.87 -11.17 -9.18 -8.47 - -6.42 -10.18 -7.06 -4.63 -8.56 -7.32 -7.77 -11.02 -6.84 -7.48 -7.52
Pp3c22_579V3.1 (Pp3c22_579)
- -0.47 -1.81 - - -0.35 -3.35 1.78 1.07 -0.51 -1.71 -0.74 -1.19 -1.84 -0.08 0.73 1.46 -1.19 - -2.43 -1.66 -0.66 - - 0.49 3.52 3.52 -1.59 -1.13 -0.4 - -3.33 -4.17 -1.63 -0.82 - -3.0 0.16 -1.27 -1.36 -1.89 -3.32 -1.68 -2.24 -6.67 -0.61 -1.91 -0.93
Pp3c22_8978V3.1 (Pp3c22_8978)
- - -5.01 -4.58 - -1.0 - 1.45 - 0.21 -2.03 - 0.11 -0.9 -0.15 0.21 0.83 0.52 - -2.22 - -0.63 -2.88 -1.95 0.66 3.12 1.98 -0.69 0.71 0.87 -1.08 -2.86 -0.53 -0.36 -2.49 -1.9 -1.22 1.06 -3.75 0.43 0.93 0.71 0.4 -0.68 -0.8 0.44 -0.6 1.21
Pp3c23_12070V3.1 (Pp3c23_12070)
- - - 1.72 - - - - - - - - - - - 4.1 4.45 - - - - - - - - 2.48 - - - -2.37 - - - - - - - - - - - - - - - - - -
Pp3c23_13020V3.1 (Pp3c23_13020)
- - - - 2.36 - - - - - - - - - - - - - - - - 2.86 - 2.92 - 4.48 2.52 - - - - - - - - - - - - - - - - - - - - -
Pp3c23_13040V3.1 (Pp3c23_13040)
- - -2.22 -5.33 -5.52 -2.96 - -4.63 0.26 -1.79 - -4.8 -2.32 -4.16 -2.42 - -0.58 -2.3 -2.51 - -5.75 1.28 - -2.45 1.35 3.21 4.38 1.82 -3.79 -5.46 -0.68 -3.19 -2.85 -5.0 -2.82 -4.44 -1.12 - -2.87 -5.58 1.02 0.17 -3.14 -5.16 -4.99 -4.33 -5.89 -0.93
Pp3c24_17970V3.1 (Pp3c24_17970)
- - - - - - - - - - - - - - 0.68 0.94 -3.34 - - - - - - - -0.16 5.09 2.93 - - -2.69 - - - - - - - - - - - - 0.22 - - - - -1.35
Pp3c25_11640V3.1 (Pp3c25_11640)
- - 3.56 - - - - - - - - - - - - - - - - - - - - 2.59 - 4.88 - - - -0.41 - - - - - - - - - - - - - - - - - -
-7.08 - -3.39 -4.16 -5.18 -6.18 -7.84 -6.87 -6.05 -6.34 -3.77 -3.31 -3.21 -4.72 -11.24 -6.32 -5.07 -2.33 -7.08 -5.25 -7.14 -6.9 -0.76 -5.14 2.99 3.94 4.53 -9.38 -7.13 -7.75 -11.67 -6.56 - -9.03 -8.06 -9.56 -8.61 -8.69 -7.84 -6.01 -7.08 - -6.85 -10.04 -9.56 -10.18 -8.88 -11.58
Pp3c27_2220V3.1 (Pp3c27_2220)
- 1.71 -0.18 2.14 0.86 - - - - - - - - - - 3.73 3.3 - - - - - - 0.55 - 3.7 - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_10560V3.1 (Pp3c2_10560)
- -2.4 -2.37 -5.93 -1.07 -2.33 -1.81 -3.18 -3.02 -1.05 -1.86 -1.75 -0.28 -1.27 -1.24 -5.19 -0.83 -0.85 0.13 -0.12 -0.91 -1.29 -1.66 -3.68 1.94 3.32 4.11 -1.47 -3.36 -1.29 -2.05 -1.4 -2.35 -2.88 -4.2 -2.99 -2.37 -0.36 -1.77 -0.23 -0.41 -1.12 -0.63 -1.29 -2.51 -0.41 -1.93 -1.1
Pp3c2_26140V3.1 (Pp3c2_26140)
0.37 2.52 - 0.09 - - - - - - - - - - -1.75 3.47 4.12 1.26 - - - - - 0.37 - 2.83 - - - -1.52 - - - - - - - - - - - - - - - - - -
Pp3c2_37350V3.1 (Pp3c2_37350)
- - 0.55 - - - - - - - - - - - - - - - - - - - - - 2.12 4.27 4.51 - - - - - - - - - - - - - - - - - - - - -
Pp3c2_4291V3.1 (Pp3c2_4291)
- -0.24 - 0.24 -3.33 -0.26 - - 2.61 - - - - - -4.93 - - -0.82 - - - - - 2.89 1.67 3.83 3.6 - -0.47 - - - - - - - - - - - - -0.72 - - - - - -
Pp3c2_5350V3.1 (Pp3c2_5350)
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_6890V3.1 (Pp3c2_6890)
- - - - - - - 4.07 - - - - - - - - - - - - - - - - - 4.96 - - - - - - - - - - - - - - - - - - - - - -
-3.48 -3.68 -2.25 -3.37 -4.94 -4.95 -5.67 -6.11 -5.39 -4.06 1.34 1.75 -1.26 -2.54 -5.95 -5.58 -3.07 -1.87 -3.85 -3.33 -3.36 -4.01 -4.1 0.98 2.19 3.85 4.18 -6.38 -7.39 -3.83 -7.44 -0.52 -7.7 -8.57 -8.2 -6.21 -7.01 -6.52 -6.3 -5.03 -4.33 -9.08 -6.69 -6.79 -8.54 -6.45 -7.84 -7.71
Pp3c3_24160V3.1 (Pp3c3_24160)
- - 2.04 -0.59 - - - - 2.04 - - - - - - 3.67 3.85 0.64 - - - - - - - 3.37 - - - -3.84 - - - - - - - - - - - - - - - - - -
Pp3c3_26830V3.1 (Pp3c3_26830)
- - - - - - - - - - - - - - - 3.94 3.9 - - - - - - - - 4.14 - - - - - - - - - - - - - - - - - - - - - -
-1.3 -2.22 -4.71 -2.9 0.65 -0.47 -0.14 -0.48 -1.24 -0.53 -1.16 -0.93 1.23 -0.25 -0.39 -1.9 0.17 -9.63 -0.16 -1.44 -6.07 -6.06 -0.77 -5.99 0.23 2.46 3.79 -1.97 0.35 -1.22 -0.98 -1.97 -3.59 -6.66 -2.87 -3.64 -2.49 -0.57 -5.17 0.77 0.74 -0.05 1.52 -0.23 -2.87 -0.73 -1.15 -1.78
Pp3c3_4490V3.1 (Pp3c3_4490)
- -5.37 - -0.64 -2.0 -6.65 - -7.23 -3.03 - - - -6.74 -4.37 -9.43 -5.36 1.72 -4.27 - - - -4.51 -5.61 - 1.56 3.93 4.61 -7.37 -3.35 -1.83 -7.07 -4.15 - - -3.74 -5.27 - -7.11 - - -2.79 -4.16 -5.33 - - - - -9.27
Pp3c5_12050V3.1 (Pp3c5_12050)
- - - - 3.23 - - - - - - - - - - - - - - - - - - - - 5.27 - - - - - - - - - - - - - - - - - - - - - -
Pp3c5_26115V3.1 (Pp3c5_26115)
- -4.8 -2.96 - -5.26 -1.88 - -2.17 - -6.29 - - -4.75 -4.01 - - -2.29 -2.8 - -1.22 - - -3.68 2.15 1.46 3.99 4.53 - - -7.46 -4.9 - - - - - - - - - -2.92 - - - - - - -6.54
Pp3c8_13920V3.1 (Pp3c8_13920)
- -2.45 -3.09 - -5.11 -2.54 -0.1 -0.45 - -2.71 -5.19 - -5.55 - -5.3 - -3.84 - -3.4 -2.69 -1.7 -3.58 - -5.66 0.28 3.65 3.29 2.29 -1.23 0.74 -1.93 -1.76 -0.03 2.28 -2.32 0.17 -0.46 0.26 -0.17 -2.3 -3.17 -3.21 -3.04 -2.23 -0.86 0.89 -2.58 -1.06
Pp3c8_8510V3.1 (Pp3c8_8510)
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
Pp3c8_8910V3.1 (Pp3c8_8910)
- - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - -
Pp3c9_20678V3.1 (Pp3c9_20678)
- 0.39 1.11 1.07 -2.94 0.19 0.64 -0.72 1.09 -0.57 -0.78 0.2 -0.21 -0.17 -0.75 0.31 0.01 0.99 -2.09 -0.6 -0.98 -1.81 -2.89 -1.66 0.5 2.57 2.7 -0.13 -1.13 -0.61 -0.66 -2.16 -0.88 -0.79 -2.8 -0.5 -0.59 -0.25 -2.18 -1.16 0.25 -0.84 -0.51 -0.77 -2.84 -0.7 -0.98 -0.81

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.