Heatmap: Cluster_15 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- 4.86 - 3.17 - - - - - - - - - - 2.49 - - - - - - - 1.32 - - 0.88 - - - - - - - - - - - - - - - - - - - - - -
Pp3c10_3960V3.1 (Pp3c10_3960)
- 0.85 1.42 -2.47 -2.11 0.35 0.95 - - -0.36 - -1.3 -0.09 -0.86 0.2 - 1.14 0.45 - 1.11 0.73 0.31 2.64 0.2 0.6 2.3 -0.02 -0.31 - -0.8 -1.38 0.4 -0.22 0.02 -1.06 -0.83 -0.64 - - 0.47 -0.33 -1.79 -0.72 -2.42 0.43 -0.57 -1.94 -1.06
Pp3c11_17181V3.1 (Pp3c11_17181)
- - 0.41 - - 0.81 0.47 - - -0.41 0.87 2.11 1.18 -1.17 1.58 - 2.27 1.92 0.5 0.59 -1.31 1.37 - -0.32 -1.46 0.06 -0.58 - 0.3 -1.7 - - -2.04 - 0.73 -0.44 - -1.56 0.19 0.63 0.73 0.18 0.02 -0.82 -1.18 -1.78 - 0.29
Pp3c12_16113V3.1 (Pp3c12_16113)
- -2.55 -1.39 -0.33 -1.18 -0.26 - -2.32 - 0.33 0.85 1.66 0.22 0.37 0.85 - - -2.32 - -2.32 - -1.04 2.99 -1.97 -1.94 -0.45 0.53 -1.45 0.56 -0.05 -0.33 -0.67 0.4 0.22 0.77 0.72 0.47 0.61 -0.09 -0.93 0.56 0.21 0.21 -0.25 -1.43 0.87 0.49 -1.06
Pp3c13_2780V3.1 (Pp3c13_2780)
- 1.08 1.21 0.73 -2.96 -0.11 -0.78 1.64 - 1.49 0.03 0.55 -0.83 -1.66 -0.63 0.02 -1.13 -0.88 - 0.5 -1.14 1.05 - 0.04 0.25 -1.37 -0.19 -0.6 - -0.48 -0.02 1.01 -0.67 -0.6 -1.16 0.37 0.83 1.22 -0.21 -1.41 0.57 -0.69 -0.26 - -1.43 0.34 0.98 0.66
Pp3c14_3311V3.1 (Pp3c14_3311)
- - 2.61 - - - - - - - - 1.55 0.34 - 3.62 - - - - - - 2.87 - - - - 2.21 - - - - - 1.25 - 2.92 - - - - - - - - - - - - 1.82
Pp3c15_1281V3.1 (Pp3c15_1281)
- - -1.53 - - - 2.0 - - -0.7 - - 0.84 - 0.52 2.16 0.6 0.66 - -0.23 -0.62 -0.55 0.48 - 2.15 0.54 0.31 -0.83 1.52 0.95 0.86 - 0.87 0.1 - -0.3 0.34 0.05 - -0.16 0.44 - - -1.35 -0.96 0.56 - 1.9
Pp3c15_20200V3.1 (Pp3c15_20200)
-0.21 0.32 0.47 -2.17 0.21 0.07 -0.9 -0.07 0.16 1.46 -0.07 0.18 -0.64 -1.09 -0.08 0.66 0.57 -0.26 0.05 -0.23 0.63 1.12 -1.88 -1.71 -0.63 -1.1 -1.19 -0.15 -1.2 0.63 -0.36 0.47 0.32 -0.29 -2.33 -0.43 0.08 1.03 -2.4 0.26 -0.22 -0.39 0.56 0.06 -0.09 1.11 -1.0 -0.64
-3.31 -2.23 -3.07 0.38 -0.88 -0.45 -1.13 -0.92 -3.21 2.6 -0.12 -0.07 -2.17 -1.03 -3.01 -2.29 0.05 -1.84 -1.54 0.76 1.22 1.22 -1.66 -2.3 -1.8 -1.25 -2.14 -1.24 -3.07 1.2 -1.44 0.01 0.71 -0.89 -1.46 -3.5 -3.64 2.2 -2.96 0.36 0.74 0.95 0.83 0.09 -1.41 2.22 -1.79 -0.37
-2.06 -0.59 0.79 1.57 1.92 2.2 1.75 2.18 -1.11 2.16 -0.66 -0.28 -3.86 -4.22 -4.84 -2.57 0.01 -0.37 0.93 1.18 -0.03 -0.52 -1.45 -0.1 0.89 -0.08 0.9 -4.82 -5.65 -0.69 -5.67 -5.39 -2.37 -6.48 - -8.9 -9.06 1.3 -8.44 -5.06 -5.79 -5.26 -4.19 -4.98 -5.41 1.13 -5.67 -5.47
Pp3c17_6780V3.1 (Pp3c17_6780)
- - - - - - - - - 0.69 1.16 -0.35 - - 1.22 - - -0.39 - - - 0.79 - - 2.79 - 3.61 - - -1.45 2.12 -0.34 -5.66 - -0.84 - - - -1.26 -18.39 - - 2.42 2.37 -0.43 -2.96 0.58 -
Pp3c18_8070V3.1 (Pp3c18_8070)
-4.98 -1.64 0.13 -2.68 0.57 0.95 0.02 -0.54 -0.25 1.71 -0.55 -0.01 -0.55 -1.78 0.14 -2.24 -0.37 0.7 0.67 0.71 -0.4 0.08 -2.5 -4.36 0.24 -3.98 -3.39 1.32 0.47 1.03 0.46 0.47 0.33 -0.61 -0.4 1.04 0.83 0.88 -2.09 0.08 -3.59 -3.64 0.28 -0.83 -0.76 0.7 -0.91 0.23
- - -1.46 -5.12 0.17 1.51 0.23 -0.96 -1.01 2.79 0.64 0.56 -0.87 -0.4 -1.88 0.08 -1.78 -2.08 -0.9 1.6 -0.18 0.83 - -4.38 1.98 -0.75 0.54 -4.69 -1.35 1.24 -0.34 -4.13 -1.2 -5.19 - -4.76 -1.93 1.81 -4.29 -1.41 -0.87 -2.04 0.7 -1.94 -2.07 1.85 -2.18 -0.05
Pp3c1_430V3.1 (Pp3c1_430)
-2.89 -1.51 -0.95 -0.4 1.31 1.2 -1.4 0.69 -1.6 3.17 -0.36 0.13 -1.34 -3.79 -0.48 -2.23 -0.7 -0.94 -1.55 -1.66 -1.66 -0.78 -2.6 -3.06 -0.6 -0.65 -0.41 -0.94 -4.32 0.43 -0.96 -3.16 -0.36 -3.46 -8.53 -1.65 -2.63 1.72 -4.47 -0.78 1.55 1.71 0.08 0.69 -3.56 1.71 0.28 -0.84
Pp3c20_14540V3.1 (Pp3c20_14540)
- 1.62 - 1.71 - -0.14 3.25 3.65 - -21.11 -2.11 -1.78 -0.64 -0.64 2.27 - 1.07 - -0.98 -0.89 -2.29 -0.89 - -2.78 - - 0.3 - 0.23 -0.61 -5.94 - -1.53 - - - -1.46 0.39 -1.79 -5.99 - - - - -2.27 -5.61 0.08 0.4
Pp3c20_15460V3.1 (Pp3c20_15460)
-0.82 - - -1.38 0.3 - - - - - - - - - 4.88 4.04 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 1.71 1.66 3.36 - 0.64 0.26 -0.43 0.73 1.41 -0.3 - - - - - - - - - -1.47 - - 0.15 2.0 0.77 0.87 -2.74 0.72 2.05 - 1.94 1.25 - - -2.92 - 0.48 - - - - - -
Pp3c21_21430V3.1 (Pp3c21_21430)
- -1.29 - -2.89 - 2.01 -2.3 2.49 - -0.71 0.58 1.54 -2.87 - 2.39 - 1.88 - - - - 1.16 - - -0.93 -0.23 -0.51 0.01 0.62 0.02 - - -1.45 -0.2 - -2.57 - -0.55 0.12 - 0.95 1.66 -0.13 1.41 0.8 0.71 - -1.21
Pp3c21_5480V3.1 (Pp3c21_5480)
- 1.81 2.15 3.4 - - - - - - - - - - 4.55 - - 1.59 - - - - - - - 0.12 - - - -3.87 - - - - - - - - - - - - - - - -0.74 - 0.39
Pp3c22_1240V3.1 (Pp3c22_1240)
- - -3.06 - - 1.14 -2.25 0.57 - 4.95 -1.24 -0.67 - - - - - - - - - - - -2.89 - -4.15 - - - 2.32 - - -1.72 - - - - 1.62 - -3.96 - - -3.47 - - 1.75 - -
Pp3c22_5419V3.1 (Pp3c22_5419)
- 1.88 -0.64 -2.64 -0.2 - - - - 0.96 -1.35 0.07 1.16 0.0 2.18 - 0.07 0.74 -0.23 -0.6 -2.04 -0.34 0.99 -1.29 -0.83 1.4 1.37 0.11 0.8 -0.28 -0.99 -1.51 -3.03 -1.32 -0.92 - - 0.45 -1.54 -1.58 0.61 1.39 0.27 0.65 -0.2 1.05 - -0.84
Pp3c23_10250V3.1 (Pp3c23_10250)
- - 1.98 - - - - - - - - - - - 3.47 - - - - - - 3.02 - - - 4.21 2.68 - - - - - - - - - - - - - - - - - - - - -
-2.13 -0.74 -2.59 1.19 0.83 -0.08 1.77 1.52 0.13 0.7 -7.76 1.02 -0.05 0.94 0.25 -0.9 -0.23 -0.41 -11.0 -0.2 -1.52 0.56 -12.52 -2.59 1.72 1.98 1.22 -1.73 -2.01 -2.77 -1.4 -1.05 -1.2 -2.0 -10.73 -0.97 0.15 0.92 0.29 -0.72 -1.44 -0.14 -0.49 -2.23 -10.4 1.0 -1.76 -1.95
Pp3c24_11180V3.1 (Pp3c24_11180)
- 1.8 1.62 1.38 0.59 - - - 2.42 - - - 1.52 - 1.25 - 2.21 0.04 - 2.67 - 0.75 - 1.2 - 0.63 - - - -1.2 0.2 - 0.08 - - - 2.12 - - - - - 1.12 - - - - -
Pp3c24_14500V3.1 (Pp3c24_14500)
- - - -2.28 - - - -15.61 0.39 - - - - - 3.54 - - - 4.89 -1.39 0.71 - - 0.31 - - - - - -2.21 - - - - - - - - - - - - - - - - - 0.83
Pp3c24_4310V3.1 (Pp3c24_4310)
- -0.41 -0.78 1.72 -1.01 1.67 -1.54 -0.33 - 1.36 -0.89 -1.12 - -1.65 1.73 - 0.49 -0.84 - 0.52 - -3.71 2.07 - 0.71 -0.69 - - -0.19 0.51 1.24 -0.06 1.0 -1.22 0.18 1.53 0.52 0.68 0.12 0.05 - - -0.33 -1.96 -0.08 -0.64 -0.82 -0.0
Pp3c24_5873V3.1 (Pp3c24_5873)
- - - - - - - - - - 2.55 - - -2.43 3.33 - 2.71 2.04 - - - - - - - - - - - -2.2 3.34 - 1.93 - - - - - - - - - - 1.45 1.23 - 1.01 -
Pp3c25_11093V3.1 (Pp3c25_11093)
- - -2.5 - - -0.93 -0.7 - - 2.99 - - 1.79 2.31 0.41 - 0.96 -2.5 - - - - - - - 0.45 - - -1.97 0.79 0.04 - 0.28 0.9 - - - 2.14 3.08 -0.19 - - - -1.2 -0.15 0.65 1.09 -0.59
Pp3c26_12949V3.1 (Pp3c26_12949)
- - - - - - - - - 1.38 -0.13 -0.54 -0.58 1.77 1.71 - -1.75 - - - - -0.34 - - - -0.84 -1.68 - - 0.63 -0.08 - -2.54 - - - - 2.33 - 3.17 1.72 1.8 1.78 0.5 1.28 1.86 - -3.23
Pp3c26_2080V3.1 (Pp3c26_2080)
- - - - - - - - 5.34 - - - - - 2.9 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c27_5790V3.1 (Pp3c27_5790)
- 1.01 1.11 -3.42 -1.25 -0.79 -1.1 -1.93 -5.94 1.56 -0.71 -0.41 -0.45 0.45 -0.22 -8.23 -1.91 -0.84 -1.6 0.22 0.87 2.0 -0.95 -8.74 -1.5 -1.95 -1.73 -1.66 -2.91 0.93 1.56 0.34 -0.08 -0.18 -2.05 -2.55 0.52 1.28 -0.84 -0.41 1.28 0.72 0.44 -0.68 -0.75 1.24 0.5 -0.43
Pp3c2_180V3.1 (Pp3c2_180)
-1.26 0.21 -0.43 -4.72 0.85 -0.1 -0.85 0.32 -1.45 2.5 -3.68 -3.64 1.38 -0.15 1.02 -1.89 -1.76 -0.76 -1.96 -1.1 -1.17 -0.36 -4.39 -5.27 -1.06 -2.1 -1.3 -4.63 -3.13 0.95 -0.5 -3.25 0.27 -0.59 -3.92 -0.4 0.4 1.67 -1.97 1.37 1.04 0.23 0.87 0.96 -0.54 1.77 -1.15 -0.72
Pp3c2_181V3.1 (Pp3c2_181)
- -0.74 -0.14 -1.04 2.76 2.27 -0.13 1.44 -1.8 2.2 -1.29 -2.41 0.7 -0.9 0.98 - -0.85 -0.48 -3.1 -3.78 -2.06 -1.51 - -2.2 -1.76 -1.29 -1.03 - -1.9 0.62 -1.19 -3.43 0.42 -0.42 - -0.93 0.65 -0.42 -1.88 0.82 1.0 0.25 -0.09 0.55 -2.0 0.94 -1.22 -1.96
Pp3c2_21930V3.1 (Pp3c2_21930)
- - 2.22 3.28 2.16 2.2 2.44 3.68 - - - - - - 0.28 - 1.22 - - - - - - 1.48 - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_7415V3.1 (Pp3c2_7415)
- - - - 3.05 0.35 - - - 1.61 -0.5 0.04 - - 1.22 - -0.62 -1.21 1.63 2.34 -0.29 2.29 0.91 - - 0.38 -0.9 - -0.68 0.67 -0.5 -0.8 -1.51 - 0.94 1.68 -0.58 - - -0.12 - - - - - -0.15 - 0.23
Pp3c3_10010V3.1 (Pp3c3_10010)
-0.2 - 2.75 -0.41 2.09 0.6 - 1.47 - -0.87 -2.37 - - 0.27 1.26 - 1.55 -2.21 - 0.55 - - 0.57 -27.96 - 2.33 - -1.13 0.27 -2.02 -0.02 -0.45 -5.61 -1.93 - -4.7 0.61 0.22 - - -1.25 - 2.57 -2.26 - -0.5 0.2 -0.83
- - - -1.07 - - - -1.09 - 0.58 - - -0.35 0.03 1.82 - 2.33 0.79 3.0 2.56 0.19 2.04 - 1.39 0.04 1.4 - - - -1.87 - - -2.16 - - - - 0.46 - 1.1 0.56 -0.9 - - - - 0.73 -1.6
Pp3c3_33290V3.1 (Pp3c3_33290)
-4.27 -1.38 - -10.22 - - - - - -1.03 -1.51 0.73 - -2.73 0.53 - -0.52 2.25 - -0.53 - - - - -4.89 -2.98 -0.1 2.0 -1.34 0.87 1.6 -0.16 1.85 0.8 -2.47 1.44 1.67 0.62 0.35 0.19 -1.06 -0.59 -0.35 1.07 -1.05 0.73 -0.07 1.85
Pp3c4_28620V3.1 (Pp3c4_28620)
- - - - - - - - - 0.85 - -0.1 -0.26 2.77 -0.1 - 2.53 - - - - - - - -0.32 2.11 2.18 - - -2.81 1.34 - - - - - 0.33 1.84 - -0.04 0.56 1.99 1.06 - - 1.05 - 1.68
-0.16 -2.34 -0.17 -4.5 -0.2 1.12 0.8 1.19 -2.34 3.22 -2.47 -2.16 -0.71 -2.33 -1.19 -0.52 -0.81 -1.65 -0.61 -0.22 -0.62 -0.51 -5.25 -2.1 -0.39 -2.74 -2.46 1.2 -0.28 1.24 1.35 -0.36 0.39 -0.29 -2.35 0.41 1.33 0.56 -0.86 -1.27 -3.57 -3.62 -1.31 -0.77 -1.27 0.43 0.15 -1.15
Pp3c4_3621V3.1 (Pp3c4_3621)
- - 2.58 -4.48 - -3.57 - - - - - - - 0.19 0.32 - - - - 0.17 - - - 2.49 1.12 - 1.19 1.16 1.32 1.84 - -0.11 0.11 - 0.71 0.48 - - - 0.42 2.0 -0.6 2.79 - -0.33 -0.95 - -0.51
Pp3c5_18830V3.1 (Pp3c5_18830)
- - 0.45 - - 1.59 - - - 1.61 1.34 0.55 1.92 1.57 1.88 2.24 2.17 0.94 0.97 -1.03 - -0.77 - -1.17 -1.67 0.34 -1.56 - 0.01 -1.04 - - - 0.13 -1.46 -0.19 0.12 - - - - - -0.02 1.06 - -0.81 -0.8 -1.14
-2.87 -2.89 -0.61 -0.87 -1.27 0.39 -0.34 0.56 -0.68 2.7 -1.02 -0.39 -1.05 -2.44 -0.8 -0.82 -0.18 0.27 0.94 0.36 -1.18 -1.36 -4.45 -2.35 1.05 -1.9 -0.77 -0.76 -2.24 1.36 -1.19 0.12 -0.15 0.01 -0.09 -2.82 -1.02 2.28 -2.24 -0.18 -1.53 -0.32 -0.78 -0.16 -1.75 2.28 -0.44 -2.3
Pp3c6_18778V3.1 (Pp3c6_18778)
- - 3.36 -0.9 - - - - - 0.15 - -0.73 0.12 1.32 1.02 - 1.49 -0.56 - - - 0.57 - -0.45 0.05 - -0.39 -0.03 - -1.63 - -0.74 -1.47 - -0.75 0.74 - 1.21 0.38 -0.66 2.61 -0.22 1.2 0.05 0.9 - - 0.48
-0.91 -0.69 -1.46 -1.81 0.04 0.45 -0.2 0.45 -0.59 1.7 1.1 1.12 0.23 0.38 0.13 -0.77 0.51 -0.58 -1.65 -1.05 -0.81 -0.96 -3.15 -1.17 0.6 0.68 0.91 -0.67 -0.77 0.41 -0.29 -0.61 -0.47 -0.89 -0.98 -0.96 -0.36 1.07 -1.37 -0.32 0.69 0.92 0.17 -0.47 -1.16 1.08 -0.82 -0.35
Pp3c6_26360V3.1 (Pp3c6_26360)
- - 2.72 - - - - - - - - - - - 1.0 - 4.57 - - 3.87 - - - - - - - - - 0.06 - - - - - - - - - - - - - - - - - -
Pp3c8_17830V3.1 (Pp3c8_17830)
-0.16 -1.56 0.13 0.29 -1.26 0.58 0.73 -1.77 0.96 -0.14 -0.35 0.62 -2.25 -1.63 0.85 - -1.47 1.27 - -1.68 - - - 1.73 0.81 1.59 1.82 -1.4 0.0 0.76 -1.79 0.03 -2.82 -0.99 - -0.82 0.85 -0.29 - 0.47 -1.43 -1.59 -1.51 -0.09 - 1.62 1.11 0.65
Pp3c9_1400V3.1 (Pp3c9_1400)
-2.22 -1.16 -0.19 1.22 -1.85 -1.36 -3.03 -2.22 -0.31 2.42 2.47 0.99 0.44 -2.05 0.98 1.16 -3.66 - -4.41 -4.52 - - - - - -3.57 - -5.39 -1.41 0.93 -2.98 -2.72 -1.65 -0.35 -5.84 -3.17 -3.71 1.9 -3.99 1.54 0.79 1.08 1.38 0.63 -0.5 1.5 -0.7 -0.66
- -0.95 - -2.83 - 1.04 1.43 1.21 -0.12 0.08 0.64 0.22 0.63 -2.31 2.62 - -2.23 - - 1.45 -0.81 -0.19 - -2.98 0.81 -3.03 0.86 -0.39 -3.81 0.9 0.38 0.03 0.16 -0.3 -1.44 -0.66 0.17 -0.36 -1.65 0.53 0.35 -0.4 -0.89 -0.15 -0.79 -0.98 -0.75 1.42

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.