Heatmap: Cluster_235 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.42 -2.39 -2.72 -0.65 -0.12 0.81 0.84 0.97 1.03 0.33 0.32 0.09 -0.24 -1.34 -0.03 -0.51 -0.24 -0.76 -0.32 0.07 -2.91 -3.42 -0.65 -0.28 0.97 -0.74 0.45 0.74 -0.02 0.09 0.67 0.16
-0.35 -1.86 -0.94 -0.76 0.32 0.8 0.72 0.68 0.76 -0.34 -0.19 -0.36 -0.33 -1.55 0.54 -0.48 -0.3 0.19 -0.21 0.74 -3.44 -2.18 -0.69 -1.18 -0.38 -0.8 0.92 0.78 0.43 0.61 0.48 0.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.