Heatmap: Cluster_123 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
Pp3c10_17660V3.1 (Pp3c10_17660)
-0.7 -2.19 -1.8 1.82 2.66 3.28 2.51 2.28 -0.01 -1.69 -5.59 -5.49 -2.18 -3.18 -2.05 -1.55 -1.03 0.82 -2.98 -2.8 -2.68 -1.89 -3.9 2.77 0.58 -0.67 -2.04 -3.5 -3.16 -3.7 -3.75 -4.46 -3.66 -3.44 -4.0 -3.72 -3.05 -2.41 -4.21 -2.96 -2.35 -2.65 -2.84 -3.67 -3.95 -2.44 -3.61 -2.84
Pp3c10_3610V3.1 (Pp3c10_3610)
-4.82 -2.15 -0.68 0.15 1.63 2.66 2.07 2.03 -1.99 -0.33 -2.38 -1.6 -0.38 -0.62 -0.67 -1.1 -0.67 -2.45 -3.42 -0.63 -1.27 -0.71 -0.17 1.82 -0.59 -1.84 0.93 0.53 -0.76 -1.03 -0.17 -1.82 -0.92 -0.68 -1.21 -1.39 -0.16 0.5 -2.08 -1.76 -0.28 -0.53 -0.71 -1.93 -2.07 0.61 -0.73 0.12
Pp3c11_15851V3.1 (Pp3c11_15851)
0.5 -2.58 1.79 2.4 -0.03 2.3 2.9 2.6 -3.11 -2.02 -3.13 - -3.35 -4.18 -2.2 - -1.26 1.24 0.27 -1.64 - -1.58 -0.73 2.98 -1.16 -1.3 -5.04 -2.44 -0.89 -2.86 -1.74 - -4.07 -2.0 -3.94 -1.72 -3.36 -1.23 - - - -4.42 - -3.15 -3.55 -1.43 -1.93 -2.57
-1.61 -2.32 0.45 1.73 1.64 2.27 2.34 2.38 -0.06 -1.97 -4.21 -3.79 -2.5 -3.12 -2.89 1.37 -0.12 0.12 -0.06 -0.4 -0.85 -0.85 -0.75 1.31 0.88 1.62 0.49 -1.02 -2.46 -1.87 -1.28 -1.41 -1.75 -1.89 -2.85 -2.53 -1.35 -0.89 -2.74 -2.27 -2.2 -2.78 -2.17 -2.05 -2.32 -0.86 -2.07 -1.85
-3.02 -0.05 0.97 2.01 3.65 1.48 2.11 2.62 -1.65 -2.42 -1.69 -1.0 -2.92 -4.0 -2.41 -1.21 -2.32 -1.43 -1.98 -2.95 -5.38 -2.33 -2.71 3.03 -0.79 -0.52 0.24 - -3.16 -4.56 -4.46 -4.31 -4.34 -4.87 -4.23 -5.61 -4.32 -4.58 -4.87 -4.95 -5.32 -5.47 -3.43 -4.89 -3.42 -3.69 -4.47 -4.54
Pp3c11_24550V3.1 (Pp3c11_24550)
- -0.73 1.13 - -0.99 2.5 2.4 3.22 2.53 - - - -4.81 - - -1.2 -2.91 -0.99 - - - - - 3.89 1.39 -2.79 - - - - - - - - - - - - - - - - - - - - - -
Pp3c12_25770V3.1 (Pp3c12_25770)
-4.91 -1.29 0.71 1.95 2.78 2.72 2.04 1.93 -0.74 -2.38 -8.25 -5.73 -4.52 -5.71 -3.13 - -1.07 0.96 -0.15 0.75 -0.66 -0.33 0.01 3.04 1.37 -2.56 -3.95 -3.83 -5.41 -3.55 -4.04 -4.13 -5.31 -3.82 -4.33 -6.19 -5.77 -3.05 -6.84 -3.47 -5.35 -5.56 -2.97 -3.51 -5.81 -3.03 -3.43 -4.31
Pp3c15_10200V3.1 (Pp3c15_10200)
0.64 1.26 2.05 2.28 2.34 2.47 2.03 1.87 -0.86 -1.66 -5.21 -3.42 -3.02 -3.73 -2.75 -3.06 -0.73 -1.46 0.48 0.6 0.31 -0.36 -3.19 2.22 -1.16 -2.19 -3.79 -1.1 -1.36 -2.64 -2.23 -1.8 -2.33 -2.07 -3.87 -2.96 -2.16 -1.9 -4.61 -3.12 -4.39 -4.94 -3.62 -2.86 -3.38 -2.18 -2.16 -2.06
- 0.22 -0.3 -4.6 1.04 1.91 1.67 1.9 0.49 -0.58 -4.37 -4.35 0.49 -0.04 -2.13 -2.6 -1.92 1.37 -1.74 -2.0 -3.16 -1.87 -5.1 2.65 1.56 -2.33 2.31 -0.23 -2.36 -1.38 -0.26 -0.07 -1.35 -2.2 -5.33 -2.07 0.01 0.15 -1.82 -2.08 -1.66 -2.09 -1.77 -1.61 -2.29 0.05 -1.28 -0.92
Pp3c16_10270V3.1 (Pp3c16_10270)
-7.09 -0.41 0.87 -0.19 1.23 3.31 3.19 3.11 -0.69 - -7.21 - -6.31 - -6.64 - -2.73 0.34 - -6.95 -5.04 -3.62 - 3.46 -0.18 -3.0 -6.24 -6.94 -3.88 -5.34 - -7.23 -5.54 -4.29 -5.48 - - - -6.54 -6.34 - -6.88 -5.3 - -4.92 - - -5.13
Pp3c16_10278V3.1 (Pp3c16_10278)
- -1.09 1.18 1.94 0.73 2.91 3.46 3.14 0.32 - - - - - -7.99 - -1.65 -1.44 - - -3.0 - - 3.21 0.02 - - - - - - - - - - - - - - -4.54 - - -4.02 - - - - -
Pp3c16_10790V3.1 (Pp3c16_10790)
-1.02 0.16 1.36 2.39 2.53 1.8 2.03 1.54 0.08 -0.56 -5.16 -5.71 -3.94 -6.6 -3.14 -0.75 0.2 0.13 0.32 0.49 0.43 0.51 -0.12 2.23 0.8 -1.81 -1.38 -0.45 -2.99 -1.58 -1.26 -3.84 -3.05 -2.66 -2.22 -3.53 -2.19 -0.92 -4.54 -3.93 -5.48 -5.97 -3.54 -3.72 -4.62 -1.13 -3.17 -2.8
Pp3c16_13412V3.1 (Pp3c16_13412)
- - 1.25 0.58 3.31 1.11 2.05 1.4 2.93 -0.59 - - -3.22 - -2.52 - 0.7 - - - - -1.77 - 3.5 1.3 -0.99 - - - -3.69 -3.91 - - - - - - - - - - - -2.9 -3.18 - -2.42 - -
Pp3c16_15340V3.1 (Pp3c16_15340)
- 0.29 0.38 - - - - - 4.0 - - - - - - - -0.56 2.53 - - 0.28 0.89 - 4.15 -0.27 0.06 - - - - - - - - - - - - - - - - - - - -1.59 - -
Pp3c16_15350V3.1 (Pp3c16_15350)
- 0.29 0.38 - - - - - 4.0 - - - - - - - -0.56 2.53 - - 0.28 0.89 - 4.15 -0.27 0.06 - - - - - - - - - - - - - - - - - - - -1.59 - -
Pp3c16_22410V3.1 (Pp3c16_22410)
-3.31 -0.09 1.21 0.01 -1.17 1.67 2.28 2.14 1.22 -1.99 -3.75 -2.45 -1.42 -1.31 -2.25 -1.53 1.22 2.26 -1.92 -1.52 -3.2 -1.86 -3.17 3.33 0.73 2.32 -1.03 -3.66 -6.94 -5.03 -4.41 -2.28 -4.12 -3.5 -3.18 -4.35 -6.25 -3.23 -4.14 -4.39 - -4.9 -4.23 -5.32 -4.45 -4.47 -6.41 -3.94
Pp3c16_250V3.1 (Pp3c16_250)
-3.04 -0.11 0.88 1.74 1.97 2.65 2.63 2.29 -1.41 -1.14 -3.77 -3.87 -2.05 -4.06 -2.26 - -2.05 0.96 -0.75 -1.43 -3.09 -0.97 -2.63 2.35 1.09 0.17 -0.57 -1.07 -2.14 -1.47 -1.89 -1.58 -1.52 -1.93 -4.33 -1.92 -1.96 -0.85 -2.9 -2.42 -2.98 -2.93 -2.78 -2.14 -1.75 -0.71 -1.25 -1.57
Pp3c16_7600V3.1 (Pp3c16_7600)
1.34 1.52 1.98 2.32 1.62 1.51 2.81 2.57 0.73 -5.0 - -7.51 -5.82 - -6.24 -0.39 -3.02 1.52 -0.43 -1.81 -0.05 -5.39 -0.19 2.2 0.05 -2.22 -7.0 -5.62 - -3.46 -6.24 - -6.62 -6.95 -7.3 - -7.24 -6.17 - -6.56 -4.88 -3.15 -4.7 -8.12 -6.9 -3.46 - -4.84
Pp3c17_9560V3.1 (Pp3c17_9560)
0.46 1.78 1.02 -0.29 -0.53 1.57 2.71 2.44 0.13 -0.77 -3.52 -4.58 -1.29 -0.75 -1.46 0.96 -0.15 1.39 -0.21 -1.56 0.06 -0.24 0.63 2.24 0.35 -0.18 -1.94 -1.7 -5.34 -2.04 -2.41 -2.56 -0.89 -2.29 -4.53 -2.56 -2.24 -1.18 -1.78 -3.08 -4.65 -4.24 -2.8 -2.76 -1.49 -1.85 -3.09 -2.52
Pp3c18_8210V3.1 (Pp3c18_8210)
-1.67 0.43 1.67 0.57 1.59 2.69 2.48 3.02 0.02 -2.64 -5.35 -5.32 -3.41 -4.95 -3.55 -3.36 -0.94 0.57 -0.74 -0.97 -2.54 -2.12 -0.36 2.37 1.18 -1.39 -0.62 -1.01 -2.69 -2.54 -1.28 -2.39 -2.97 -2.82 -1.35 -2.5 -1.73 -1.22 -5.14 -4.11 -3.31 -4.69 -4.08 -4.31 -4.73 -1.23 -4.02 -1.54
Pp3c19_12420V3.1 (Pp3c19_12420)
- -1.83 -0.24 1.77 2.24 3.31 3.42 2.43 - -4.17 - - - - - -0.71 -2.91 0.7 - - - - - 2.96 1.01 -2.0 - - - -6.81 - - -4.88 - - - - -2.47 - - - - - - - - - -4.33
Pp3c1_25150V3.1 (Pp3c1_25150)
-1.0 1.13 2.1 2.62 2.68 2.23 1.78 1.7 -0.45 -2.34 -4.61 -4.84 -3.23 -4.76 -2.82 -1.28 0.35 0.22 0.87 0.27 -0.31 -0.16 -1.16 2.15 -0.69 -2.72 -2.64 -2.83 -4.45 -3.12 -2.79 -2.75 -3.37 -3.22 -6.63 -4.14 -2.8 -2.1 -4.88 -3.02 -3.92 -3.99 -2.52 -3.02 -3.96 -2.38 -2.42 -2.95
0.83 0.47 0.54 -0.92 -0.74 1.52 1.64 2.11 0.89 -0.18 -2.07 -2.42 -0.33 -1.45 -1.1 -0.11 1.05 1.4 0.23 -0.13 -1.22 -1.16 -3.81 1.43 0.64 1.01 -0.47 -0.15 -1.03 -1.01 -0.04 -0.24 -1.34 -2.16 -0.66 -1.7 -0.11 0.04 -2.8 -1.38 -0.99 -1.2 -0.97 -2.2 -2.02 0.08 -1.75 -0.99
Pp3c1_37860V3.1 (Pp3c1_37860)
-1.62 -0.55 -0.66 - 0.81 1.09 1.9 2.09 0.32 0.17 -3.07 -2.4 1.61 0.43 -0.38 -0.73 -1.57 1.13 - 0.49 -0.51 1.58 - 1.98 2.59 1.78 0.31 -0.67 -2.17 -3.49 -1.78 -1.04 -2.17 -3.74 -4.2 -2.39 -1.65 -2.03 -2.73 -4.23 -3.35 -5.11 -6.45 -4.99 -2.55 -2.58 -3.09 -2.96
Pp3c21_4670V3.1 (Pp3c21_4670)
-4.08 0.43 2.48 -6.34 -0.41 3.48 2.52 2.66 -0.32 -2.47 -4.96 -5.71 -2.71 -4.36 -1.82 -4.75 0.74 0.13 0.25 -0.39 -1.11 -0.74 0.65 2.08 -2.03 -2.82 -3.74 -1.12 -2.55 -1.92 -2.49 -3.9 -2.83 -2.51 -2.48 -2.49 -2.95 -2.26 -2.94 -2.69 -4.42 -3.43 -2.74 -2.96 -3.53 -2.61 -3.47 -2.16
Pp3c23_15610V3.1 (Pp3c23_15610)
1.41 0.82 1.22 2.33 0.09 2.06 2.03 2.95 0.96 -1.91 -4.19 -4.73 -3.81 -3.32 -2.56 0.71 0.86 1.02 -0.58 -0.24 -0.62 -1.23 -1.02 2.48 -1.44 -2.81 -4.9 -3.26 -3.79 -3.55 -3.85 -4.33 -4.02 -4.07 -5.12 -6.48 -4.45 -2.07 -5.23 -2.65 -4.11 -5.17 -2.32 -3.54 -3.48 -2.2 -3.47 -4.21
Pp3c23_2240V3.1 (Pp3c23_2240)
- -2.09 0.41 2.6 2.2 2.4 1.9 2.34 -2.05 -1.85 -6.62 -7.09 -5.14 -7.04 -2.81 -0.25 -2.32 1.29 0.14 -0.6 -0.47 -1.59 -0.59 2.53 1.2 1.43 -0.17 - -4.57 -3.16 -4.4 - -4.83 -5.99 -7.84 -9.58 - -0.19 - -4.31 -6.12 -5.54 -3.56 -3.34 -5.11 -0.29 -3.43 -4.38
Pp3c25_13421V3.1 (Pp3c25_13421)
0.32 -1.13 0.36 -1.51 -0.92 1.2 2.04 2.07 0.35 0.03 -3.11 -3.58 0.35 -0.04 -1.02 -1.63 0.52 1.68 -0.42 0.37 0.32 -0.04 -2.32 2.08 1.2 1.04 -0.89 -0.81 -1.35 -1.21 -0.34 -0.54 -1.44 -1.31 -2.62 -1.77 -0.67 0.16 -2.41 -1.16 -1.49 -1.57 -1.75 -2.36 -1.99 0.12 -1.57 -1.47
Pp3c26_5370V3.1 (Pp3c26_5370)
-0.22 -2.76 -0.61 -4.02 -0.24 1.3 1.17 2.57 -0.08 -0.35 -0.82 -0.49 -0.91 -2.3 -2.09 -2.92 -0.76 0.83 -0.9 -0.5 -0.92 -0.7 1.57 1.69 1.65 0.69 0.46 -0.44 -0.45 -0.6 -1.1 -0.04 -1.09 -2.03 -0.03 -0.36 -1.38 0.94 -1.29 -1.24 -0.13 -1.15 -1.22 -1.67 -2.77 0.55 -2.13 -1.21
Pp3c2_17550V3.1 (Pp3c2_17550)
-0.57 1.62 2.58 2.44 2.45 2.64 2.23 2.65 -0.69 -6.61 -4.09 -4.63 -5.85 -6.16 -7.08 -3.95 -3.2 -0.19 -3.29 -3.1 -3.61 -1.17 -7.24 2.71 -0.29 -2.28 -6.92 -9.56 -7.81 -10.46 -9.66 -6.08 -10.11 - -9.96 - - -7.94 - -8.32 - -9.46 - -8.34 - -8.21 -8.59 -9.9
Pp3c2_33710V3.1 (Pp3c2_33710)
-1.04 - 0.87 2.05 2.95 4.06 2.41 1.46 - - - - -2.94 - -4.98 - -0.44 0.86 - -2.37 - - - 1.84 -2.42 -0.43 - -2.35 - -4.94 -6.81 - - - - -2.05 -2.58 -2.43 - - - - - - -2.87 -2.15 -1.43 -4.01
Pp3c3_19830V3.1 (Pp3c3_19830)
-0.07 0.47 1.71 -2.47 -1.4 3.11 2.08 2.54 -1.56 -0.59 -2.65 -1.51 -0.94 -0.45 0.39 0.52 0.7 -0.68 -1.93 -0.88 -1.31 -2.01 0.1 1.0 -1.18 -0.24 -1.33 -0.01 -1.54 -0.73 -1.72 -2.64 -1.58 -0.9 -0.71 -0.85 -1.11 -0.75 -1.87 -1.8 -1.54 -1.65 -1.53 -2.1 -2.42 -0.62 -1.66 -0.49
Pp3c6_13820V3.1 (Pp3c6_13820)
-0.0 1.44 0.44 0.99 1.17 2.5 2.27 3.15 - -5.09 - - - - -2.78 - 0.14 -1.91 1.95 0.85 0.04 -1.05 -2.49 2.99 1.16 - -3.86 - - -7.26 -4.77 - -4.91 - - -3.46 - - - - - - - - - - - -5.41
Pp3c6_6920V3.1 (Pp3c6_6920)
- 0.15 -0.16 2.06 1.54 2.13 2.59 2.91 - -1.78 -2.57 -0.72 -3.49 -3.81 -1.62 -0.89 -3.01 1.82 -1.35 0.37 0.1 0.18 -0.44 2.36 0.8 -0.06 -0.15 -3.78 -2.42 -3.06 -5.67 -4.29 -3.04 -3.33 - -3.4 - -2.54 -4.52 -5.29 - -4.84 -3.92 -1.79 -2.57 -1.99 -3.99 -6.82
Pp3c7_18820V3.1 (Pp3c7_18820)
0.68 -0.42 1.03 -0.93 0.45 0.89 1.62 2.07 0.43 0.06 -2.84 -1.93 -0.73 -1.45 -0.36 -0.35 0.18 -0.26 0.4 0.8 0.32 0.26 -2.53 1.57 0.44 -0.82 -0.62 0.28 -0.44 -0.74 -0.36 -0.67 -0.47 -0.32 -0.9 -0.15 -0.0 -0.27 -1.36 -1.1 -2.14 -1.72 -1.07 -0.67 -0.78 -0.18 -0.35 -0.7
Pp3c7_23321V3.1 (Pp3c7_23321)
0.36 1.72 -0.81 0.08 -1.16 -1.92 -0.46 0.97 3.18 -2.49 -3.06 -3.37 -3.59 -5.1 -3.9 1.92 0.29 1.36 0.81 -0.08 -0.53 0.94 - 3.05 2.17 -0.54 -2.47 -3.74 -3.82 -2.44 -2.85 -1.89 -2.91 -3.16 -3.9 -2.73 -3.16 -3.53 -5.01 -2.77 -3.18 -2.61 -2.84 -5.06 -5.92 -3.37 -3.41 -6.18
Pp3c8_3790V3.1 (Pp3c8_3790)
-0.6 -1.99 1.71 2.39 2.86 2.19 2.08 2.26 -0.28 -2.12 - - -3.92 -4.41 -2.46 -3.14 -0.3 0.43 -0.27 0.49 0.09 -0.14 0.17 2.11 -0.78 -0.63 -3.71 -1.2 -3.11 -1.79 -3.12 -4.22 -3.36 -2.44 -4.13 -2.66 -2.44 -1.68 -4.65 -2.69 -4.66 -5.22 -2.97 -3.12 -5.0 -2.24 -2.76 -2.03
Pp3c8_6630V3.1 (Pp3c8_6630)
- - 0.65 - -1.3 0.63 2.75 2.95 - -1.16 -0.44 0.06 0.92 -1.54 -2.4 - -0.57 0.72 - - - - -1.8 3.01 1.82 -0.14 -0.59 -1.42 -0.17 -1.06 -0.81 -2.0 -1.56 -3.06 -1.27 -0.52 0.0 -0.27 - -0.47 - - -2.33 - -1.48 0.57 -2.63 -0.46
Pp3c8_9560V3.1 (Pp3c8_9560)
-3.35 -0.17 0.6 1.18 2.65 2.92 1.55 1.91 -0.77 -2.14 - - -2.61 -4.02 -2.23 - -0.39 -1.73 0.38 0.54 1.66 -0.32 -0.57 2.21 -2.9 -5.78 -3.65 -1.58 -2.48 -1.81 -1.24 -3.89 -1.23 -1.23 -2.92 -3.15 -0.8 -0.09 -2.12 -0.99 -2.05 -0.75 -0.94 -0.56 -1.06 -0.67 -1.76 -3.41
Pp3c9_1280V3.1 (Pp3c9_1280)
0.55 1.23 1.55 -0.66 -0.95 0.65 1.92 1.81 1.28 -0.44 -3.53 -3.0 0.06 -0.4 -0.73 -1.01 0.79 1.13 -1.87 -0.75 -1.49 -1.86 -2.48 2.55 -0.04 0.77 -0.72 -0.21 -1.29 -1.04 -0.03 -0.87 -1.32 -1.58 -1.19 -1.05 -0.3 -0.16 -2.29 -1.29 -1.8 -1.81 -1.61 -2.26 -2.18 -0.28 -1.46 -1.01
Pp3c9_20349V3.1 (Pp3c9_20349)
-2.32 -0.07 0.85 1.72 1.68 2.04 2.33 2.45 -1.13 -2.31 -3.51 -2.83 -2.1 - -2.0 -1.98 -0.11 1.52 -2.27 0.09 1.24 -2.17 1.36 2.18 0.6 1.39 0.16 -3.3 - -2.51 - - -3.56 - -3.73 - -2.82 -0.87 -2.85 -3.61 -2.44 -2.25 -3.5 - -3.4 -2.25 -3.3 -3.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.