Heatmap: Cluster_96 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
Pp3c10_16910V3.1 (Pp3c10_16910)
- - -0.19 5.1 -0.71 1.04 3.16 - - - - - - - - - - - - - - - - - - 0.29 - - - - - - - - - - - - - - - - - - - - - -
Pp3c10_18579V3.1 (Pp3c10_18579)
-0.16 0.41 2.28 4.18 0.46 0.79 1.16 0.62 1.84 -2.74 - - -5.2 - -2.74 0.4 0.11 0.34 0.02 -1.85 -2.29 -1.26 -0.0 2.25 -1.44 -2.97 -6.82 - - -9.59 -7.47 - - - - - - -4.21 - -6.48 - - -4.62 -7.28 -6.9 -3.54 - -
Pp3c10_19820V3.1 (Pp3c10_19820)
- - - 4.66 -0.18 1.56 3.36 - - - - - - - - 3.1 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c10_2882V3.1 (Pp3c10_2882)
- 2.0 2.47 4.75 -0.8 - -0.43 0.82 -0.33 - - - - - -2.15 -0.65 0.03 0.83 - - - - 0.19 - - - -0.91 - -1.05 -4.69 - - -3.66 -2.05 -1.01 -1.76 - -1.78 - -1.93 - - - - - - - -2.39
Pp3c10_3780V3.1 (Pp3c10_3780)
- - 0.1 4.67 2.56 0.32 2.39 - - - - - - - - 2.53 0.66 - - - - - - - - - - - - - - - - - - - - 0.1 - - - - -0.44 - - - - -
Pp3c11_22386V3.1 (Pp3c11_22386)
- - - 5.29 - - - - - - - - - - - - 3.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c12_2820V3.1 (Pp3c12_2820)
- - -2.68 4.47 3.8 2.56 1.75 1.11 -4.49 - - - - - -8.13 -1.89 -5.2 -7.37 - - - - - -6.8 - -7.29 - - - - - - - - - - - - - - - - - - - - - -
Pp3c13_20040V3.1 (Pp3c13_20040)
- 2.46 - 4.5 -1.44 - - 2.12 - - - - - - -4.57 - - - - 0.8 - 3.21 - - - 1.46 - - - - - - - - - - - - - - - - - - - -0.37 - -0.67
Pp3c14_21289V3.1 (Pp3c14_21289)
- - - 5.31 - - 3.06 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c16_16200V3.1 (Pp3c16_16200)
-2.38 -1.69 1.48 4.84 0.88 1.47 1.27 0.9 -1.16 -5.29 -5.22 -5.5 -6.12 -6.86 -5.01 -3.66 -5.08 -4.67 -1.96 -4.31 -6.88 -5.0 -6.29 -4.54 1.66 -1.05 0.92 -5.03 -4.44 -4.42 -7.4 -6.32 -5.04 -4.87 -5.9 -5.48 -4.42 -7.06 -4.64 -4.84 -7.03 -5.96 - -4.72 -5.9 -6.18 -6.25 -5.28
- -0.38 0.45 5.07 1.08 0.97 1.3 0.1 -5.3 -3.58 -3.9 -3.6 -3.03 -5.01 -3.42 -1.74 -1.02 -1.23 -0.94 -1.58 -2.41 -1.04 -4.24 -2.23 -2.14 -1.55 -6.61 -6.51 - -4.52 -4.99 -4.54 -6.95 -5.62 -5.71 - -4.44 -4.49 -4.97 -3.77 - -4.97 -5.28 -3.84 -7.02 -3.48 -5.0 -6.26
Pp3c19_17320V3.1 (Pp3c19_17320)
-1.45 -1.57 -5.76 4.43 -0.99 0.48 0.86 1.02 0.26 -2.23 -4.17 -3.86 -0.39 -1.43 -1.68 - 0.22 -4.78 -2.91 -0.86 -5.32 0.5 -5.23 -7.27 1.06 0.13 -0.75 -2.53 1.46 -2.13 -2.55 -2.14 -3.47 -0.97 -0.91 -3.82 -2.93 0.35 -2.49 -4.26 -2.52 -2.57 -2.19 -5.45 - 0.42 -2.36 0.47
Pp3c1_22220V3.1 (Pp3c1_22220)
-1.93 -1.21 -2.58 4.14 2.62 2.19 2.62 2.52 0.5 - -7.37 - -6.1 -5.23 -8.02 -5.07 -3.06 -0.35 -5.11 -4.12 -4.43 -4.01 -6.34 1.43 -0.16 -3.4 - -2.66 -5.13 -6.55 -4.35 - -6.27 -4.42 -7.08 -6.06 -6.21 -7.18 -5.55 -4.5 -6.86 -7.2 -5.63 -4.83 -6.61 -4.57 -4.32 -5.97
Pp3c1_25860V3.1 (Pp3c1_25860)
- - -0.29 5.2 -2.32 1.53 - 1.6 - - - - -3.13 - -4.3 -0.1 0.23 - - - - - - -1.69 -1.82 0.07 - - - - - - - - - - - - - - - - - -1.88 - - - -
Pp3c1_38146V3.1 (Pp3c1_38146)
0.66 -0.23 -0.32 4.24 -0.48 1.65 2.09 1.64 -0.4 -1.41 -2.74 -3.02 -1.32 -1.91 -2.06 0.32 1.56 -0.76 -0.08 -1.14 -2.0 -1.96 -3.27 -1.8 -0.2 -1.4 -2.25 -2.59 -2.27 -2.63 -2.22 -1.1 -2.54 -2.17 -4.4 -3.16 -2.17 -1.83 -2.76 -2.81 -3.39 -3.11 -2.67 -3.34 -2.41 -2.33 -2.79 -2.71
Pp3c1_490V3.1 (Pp3c1_490)
- 1.43 2.6 4.5 -2.3 2.62 - 0.64 - - - - - - -5.31 - 1.05 -0.3 - - - - - -1.19 - 2.43 - - - - - - - - - - - - - - - - - - - - - -
- - - 4.47 2.59 1.75 1.66 3.19 -0.12 - - - - - - 1.46 -1.17 -3.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c21_20710V3.1 (Pp3c21_20710)
-0.45 -1.77 -0.35 4.7 0.68 1.24 1.67 2.2 0.27 -1.78 -4.46 -4.1 -1.82 -2.49 -1.69 -2.44 -2.87 -1.69 -3.58 -4.31 -4.02 -3.13 -2.19 -2.27 -2.11 -0.48 -2.13 -3.56 -6.53 -2.16 -2.53 -2.79 -3.86 -4.03 -6.66 -3.89 -2.79 -0.72 -5.05 -3.02 -1.89 -2.01 -3.03 -4.12 -4.69 -0.7 -3.8 -1.83
Pp3c22_12020V3.1 (Pp3c22_12020)
- - - 5.22 - - - - - - - - - - - - 3.42 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c23_16750V3.1 (Pp3c23_16750)
-2.19 -7.3 -6.81 5.3 1.39 1.24 0.49 -0.06 -0.17 -10.31 - - -8.58 - -9.38 -2.66 -7.86 -9.47 - - - - - -9.36 - -8.31 -7.75 - - -12.66 - - - -8.13 - - - -9.29 - - - -9.13 - -9.76 - - - -
Pp3c23_19990V3.1 (Pp3c23_19990)
-8.27 0.08 0.29 4.91 2.39 2.17 1.37 1.48 -2.03 - - - -8.7 - -9.35 -6.67 -7.33 -2.8 - -5.5 -6.54 -7.25 -6.85 - -6.07 -5.96 - - - - - - - - - - - - - - - - - - - - - -
Pp3c23_20490V3.1 (Pp3c23_20490)
- - 1.08 5.01 -1.51 2.43 2.01 0.57 - -5.19 - - -4.11 -4.0 -3.93 -0.7 - -0.86 - - - - - -4.46 -4.29 -1.76 - -4.31 -4.63 -4.71 -5.06 - -4.75 -4.81 - - - -3.29 - -4.07 -4.08 -4.42 -4.59 - - -3.33 - -4.69
Pp3c23_690V3.1 (Pp3c23_690)
- 2.25 1.41 4.05 0.54 1.66 1.43 0.37 - - 0.62 0.81 -3.54 -1.79 -3.23 - 2.27 0.73 - -2.67 - -1.1 - -0.28 -1.61 0.51 -1.08 - - -2.52 -2.95 - - - - - - -1.23 - -2.35 - - -2.8 - - -3.25 -2.03 -4.61
Pp3c24_13220V3.1 (Pp3c24_13220)
- - - 5.0 0.26 - - - - - - - - - -3.32 - 1.7 - 1.49 - - 1.75 - 1.35 - 0.55 - - - - - - - - - - - 0.43 - - - - - - - - - -
Pp3c27_3880V3.1 (Pp3c27_3880)
- - 0.45 4.73 -0.36 - - - -1.91 - - - - - - 3.04 2.61 -0.09 - - - - - - - 1.9 - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_10110V3.1 (Pp3c2_10110)
0.69 - 0.56 4.4 1.36 0.33 3.98 1.45 - - - - - - - - - 0.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c2_12391V3.1 (Pp3c2_12391)
- - 0.93 3.95 1.98 -0.13 1.28 -1.6 - -1.25 -1.49 0.46 0.13 1.26 -1.85 1.56 -0.86 1.1 -1.3 -0.45 -1.59 0.15 - 0.91 0.04 0.85 0.24 - - -2.32 -3.42 - -3.44 -2.46 -3.77 - -2.86 -2.46 - - -2.05 -0.68 -2.56 -3.84 - -1.12 -2.36 -2.0
Pp3c2_38290V3.1 (Pp3c2_38290)
- - 0.96 4.77 1.49 1.47 - - - - - 1.16 - - -4.07 - 0.78 0.96 - - - - - 1.55 -0.89 0.54 -0.79 - - - -1.53 - -2.38 - - - - - - - - -0.19 - - - - - -1.83
- 1.93 2.07 5.2 -0.91 1.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.42 - - - - - - - -
Pp3c3_19891V3.1 (Pp3c3_19891)
- - 3.22 4.03 0.6 - 0.3 -0.23 - -1.54 - - - -1.38 -5.89 - - -2.2 - - - -1.19 2.86 2.54 -2.07 -0.2 - - - -0.87 - - - - - -0.88 -2.14 - - - -0.19 -4.09 - - - -1.7 - -0.67
Pp3c3_260V3.1 (Pp3c3_260)
1.08 - -0.88 5.13 - - - - - - - -3.92 - - - 0.45 - - - - - - 3.14 - - - - - - - - - - - - - - - - - - - - - - - - -
- - 3.26 4.3 0.54 - - - - - - - - - -2.21 - - 1.54 - - - - - - - 3.81 - - - -2.41 - - - - - - - - - - - - - - - - - -
Pp3c3_7219V3.1 (Pp3c3_7219)
- 0.02 -2.96 5.22 -1.81 -1.82 0.3 -2.17 -4.26 -2.06 -3.07 -2.92 -2.29 -2.73 -1.15 -6.23 -1.83 -1.89 -3.69 -2.11 -3.03 -2.06 -2.3 0.16 -2.27 -1.74 -2.61 -2.79 -4.22 -2.46 -2.96 -3.57 -3.96 -3.46 -4.89 -3.82 -4.84 -1.56 -3.24 -2.19 -2.32 -2.23 -2.28 -2.81 -3.01 -1.71 -3.55 -3.28
Pp3c4_2100V3.1 (Pp3c4_2100)
- - -0.78 4.34 0.98 2.06 1.47 3.18 - -0.62 -0.56 - - -2.08 -2.3 -0.51 0.94 -2.8 - - -1.78 - - - -1.23 -0.13 -2.05 - - -3.62 - -2.4 - -0.59 - - - -2.03 - -2.32 - - - -2.51 - -0.47 -0.87 -
Pp3c4_23060V3.1 (Pp3c4_23060)
- - - 4.28 3.74 - 3.23 2.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c4_23310V3.1 (Pp3c4_23310)
- 2.09 - 4.7 - - - - - - - - - - - - 1.68 0.68 - - - - - - - 3.69 - - - - - - - - - - - - - - - - - - - - - -
Pp3c4_32170V3.1 (Pp3c4_32170)
-3.97 - - 5.44 -1.11 0.79 0.2 -0.39 -1.19 - -8.95 - -9.31 - -10.48 -5.28 -8.06 - - - - - - - -8.18 -6.68 - - - - - - - - - - - - - - - - - - - - - -
Pp3c5_18399V3.1 (Pp3c5_18399)
- - -1.38 4.67 0.08 -0.04 2.32 1.46 -1.8 -2.46 -0.54 -1.87 - - -1.84 0.14 0.47 0.96 - -2.9 - -1.65 - -2.91 -0.62 0.45 -0.35 -1.35 -2.39 -2.45 -3.64 -3.19 -1.81 -2.82 - -1.86 - - - -0.94 - - -2.74 - -3.07 - - -1.39
Pp3c5_22531V3.1 (Pp3c5_22531)
- - -2.68 4.3 -0.48 -1.11 2.97 0.83 - - - - - - -5.08 - -2.08 - - - - - - -1.83 2.34 1.65 2.95 - -0.22 - - - - - - - - - - - - - - - - - - -
Pp3c6_10570V3.1 (Pp3c6_10570)
- - 0.65 4.67 - 0.49 - 1.89 2.14 - - - - - - - 2.59 1.69 - - - - - - - 0.98 - - - -4.34 - - -2.15 - - - - - - - - - - - - - - -
Pp3c6_10990V3.1 (Pp3c6_10990)
-0.06 0.15 -0.29 4.19 0.03 1.82 1.43 1.22 -0.0 -3.25 - - -4.04 - -2.93 2.99 -2.6 -3.15 2.05 1.19 -1.44 -1.07 -3.77 - -5.01 -3.3 - - -5.73 -4.58 -5.79 - -6.23 - - - - -4.77 - -4.8 - - - -4.69 - -4.05 - -
Pp3c6_5610V3.1 (Pp3c6_5610)
- - - 3.98 1.11 -0.23 2.21 1.08 1.31 -0.72 -3.58 - - -1.87 -1.82 2.31 - - 2.62 - - -0.19 - - 1.13 - 0.65 - - -1.14 -0.66 -1.21 - - - -2.25 - - - -1.95 -1.95 -3.23 -2.01 - - -1.47 - -
Pp3c7_27400V3.1 (Pp3c7_27400)
- - 3.39 5.23 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Pp3c8_15930V3.1 (Pp3c8_15930)
- - 0.76 4.43 - - - - - - - - - - - - 3.98 - - - - - - - - 3.16 - - - - - - - - - - - - - - - - - - - - - -
Pp3c8_19740V3.1 (Pp3c8_19740)
- - -0.94 4.2 2.13 2.47 2.82 2.86 1.36 - - - -5.36 - -7.69 -1.52 -2.5 -0.21 - -2.99 - - - -1.04 -3.22 -3.87 - - - -7.04 -5.52 -4.22 - - - - - - - - - - - - - - - -
Pp3c8_700V3.1 (Pp3c8_700)
- - -2.68 4.03 1.74 0.69 1.37 1.07 1.24 -1.02 - - -0.55 -4.27 -0.83 0.95 -0.04 -0.86 -0.84 0.4 -0.68 -0.36 - -1.09 -3.21 -0.12 -2.69 -0.41 -0.91 -1.5 -0.2 -1.73 -0.65 -1.22 -2.29 -1.69 -0.55 -0.25 -1.53 -0.59 -2.12 -3.08 -1.47 -1.19 -1.79 -2.1 -1.63 -1.47
-0.82 0.98 0.41 4.07 3.48 2.92 1.64 1.64 -2.86 -7.1 -5.53 -5.05 -6.01 -7.86 -7.16 -3.29 -8.02 -6.93 -4.57 -4.23 -5.13 -5.37 -10.32 -2.5 -1.23 -3.49 -0.4 -5.24 -6.89 -6.57 -3.33 -8.35 -4.99 -6.69 -7.21 -5.11 -4.84 -5.75 -5.76 -5.83 -11.36 -7.74 -7.79 -4.72 -6.87 -6.41 -3.68 -7.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.