- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Archegonia (mature) | Antheridia (9 DAI) | Antheridia (small, 11 DAI) | Antheridia (mature, 14-15 DAI) | Antheridia (japan) | Antheridia | Antheridia Reute | Antheridia Gransden | Sperm cell packages | Gametophore | Gametophore (dehydrated) | Gametophore (rehydrated) | Gametophore (hydroponic) | Gametophore+auxin (hydroponic) | Leaflets | Paraphysis | Sporophyte (9 DAF) | Sporophyte (16 DAF) | Sporophyte S1 | Sporophyte S2 | Sporophyte S3 | Sporophyte S4 | Sporophyte (10 DPC) | Spore capsule (green) | Spore capsule (green, reute) | Spore capsule (mature) | Spore capsule (mature, reute) | Spores (germinating, continous light) | Protoplast | Protonema | Protonema (liquid culture) | Protonema+aba | Protonema+gametophore | Protonema+gametophore (continous light) | Protonema+gametophore (heat stress) | Protonema+gametophore (high light) | Protonema+gametophore (low light) | Protonema+gametophore+acetone | Protonema+gametophore+gib.acid (continous light) | Protonema+gametophore+glucose (blue light) | Protonema+gametophore+glucose (darkness) | Protonema+gametophore+glucose (far red light) | Protonema+gametophore+glucose (red light) | Protonema+gametophore+glucose (uv-b light) | Protonema+gametophore+jasmonate | Protonema+gametophore+stringolactone | Protonema+glucose (continous light) | Chloronema |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Pp3c10_19040V3.1 (Pp3c10_19040) | - | - | - | 4.59 | - | - | - | - | 2.88 | 0.16 | - | 1.06 | - | - | -3.08 | - | - | 1.37 | - | - | - | 1.73 | - | - | - | 1.31 | 2.19 | - | - | -1.68 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c10_7267V3.1 (Pp3c10_7267) | - | - | 1.17 | 4.12 | -1.45 | - | - | - | - | -0.39 | - | - | 2.67 | - | 0.5 | - | 1.06 | 1.65 | - | -1.72 | - | 1.42 | - | -0.86 | 0.46 | 1.71 | 2.6 | - | - | -4.74 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c11_2191V3.1 (Pp3c11_2191) | -1.33 | 2.66 | -1.79 | 3.24 | - | - | - | - | - | - | - | - | - | - | -1.18 | 4.56 | 2.82 | -1.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c11_22137V3.1 (Pp3c11_22137) | 2.09 | - | -0.73 | 4.67 | -0.76 | 1.63 | 0.84 | 0.67 | - | - | - | - | - | - | -8.54 | -0.59 | -3.29 | -0.15 | - | - | - | - | - | 2.99 | -0.33 | -2.74 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c11_3080V3.1 (Pp3c11_3080) | - | 4.26 | - | 4.47 | - | - | - | - | - | - | - | - | - | - | - | - | 2.73 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c12_18768V3.1 (Pp3c12_18768) | - | - | 1.09 | 4.03 | 0.13 | -0.21 | -0.29 | 1.55 | - | -2.84 | 0.39 | -0.15 | -2.0 | -3.37 | -2.68 | -0.26 | 0.34 | 1.42 | -0.87 | -2.61 | - | -1.41 | -3.78 | 2.25 | -1.05 | 0.94 | -1.35 | -1.28 | -1.04 | -1.49 | -1.35 | -4.99 | -2.91 | -1.26 | -1.71 | -2.16 | -2.87 | -0.26 | -1.76 | -1.39 | -0.92 | -1.88 | -2.27 | -1.12 | -1.41 | -0.42 | -2.54 | -1.49 |
Pp3c12_25189V3.1 (Pp3c12_25189) | -3.88 | -4.44 | 0.59 | 4.65 | -1.68 | 0.14 | 0.19 | 0.17 | -0.47 | - | - | - | -7.78 | - | -9.86 | - | -3.17 | 1.05 | -4.62 | -2.69 | -2.51 | -2.68 | - | 3.23 | 0.13 | 0.97 | 0.76 | - | - | -9.53 | - | - | - | - | - | - | - | - | - | - | - | - | - | -7.74 | - | - | - | - |
Pp3c13_19900V3.1 (Pp3c13_19900) | -1.39 | -0.18 | -0.47 | 2.86 | 1.6 | 0.8 | 1.28 | 1.68 | 1.38 | 0.52 | -2.25 | - | -4.23 | -3.63 | -2.84 | 3.62 | 0.27 | -2.89 | - | - | -2.48 | -0.87 | - | -2.54 | -0.95 | 2.07 | -1.5 | - | - | -2.78 | -0.08 | - | - | - | - | - | - | -0.71 | - | -2.67 | -3.41 | - | -1.88 | - | - | 0.03 | -0.2 | -3.89 |
Pp3c13_21290V3.1 (Pp3c13_21290) | 0.79 | -1.15 | -0.72 | 3.84 | 0.32 | 0.48 | 1.74 | 2.03 | 2.14 | 0.3 | -0.46 | 0.36 | -1.04 | -2.61 | -0.52 | 0.64 | 0.93 | -1.75 | -4.09 | -5.16 | - | -1.87 | - | -5.47 | -4.25 | 2.38 | -3.13 | - | - | -2.77 | -3.22 | -3.43 | - | -6.15 | - | - | - | -1.31 | -4.98 | -2.61 | -1.61 | -1.33 | -1.98 | - | - | -1.47 | - | -5.09 |
Pp3c14_15440V3.1 (Pp3c14_15440) | - | - | - | 3.87 | - | - | 2.39 | 2.61 | 0.92 | - | - | - | -0.57 | - | - | 3.92 | 0.22 | -0.88 | - | - | - | - | - | - | - | 1.38 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c14_4700V3.1 (Pp3c14_4700) | - | 3.8 | 2.63 | 4.0 | -3.31 | -2.45 | - | - | 1.72 | - | -1.23 | - | - | - | - | - | - | - | - | - | - | - | 1.97 | 1.92 | - | - | - | - | - | -2.94 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c14_6750V3.1 (Pp3c14_6750) | - | -1.17 | -0.99 | 4.32 | 1.18 | -0.22 | 1.22 | 0.5 | - | - | -1.2 | -1.57 | - | - | -1.87 | 3.58 | 1.1 | -0.44 | - | - | - | -1.65 | - | -1.35 | -3.85 | 1.22 | - | - | - | -3.88 | -3.56 | -1.47 | - | - | - | - | - | -1.37 | - | - | - | - | - | - | - | -3.32 | -2.96 | - |
Pp3c15_16900V3.1 (Pp3c15_16900) | - | - | - | 4.88 | - | - | - | - | - | - | - | - | - | - | - | - | 4.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c16_10120V3.1 (Pp3c16_10120) | - | - | 1.99 | 5.46 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c16_4158V3.1 (Pp3c16_4158) | - | - | - | 5.48 | - | - | - | - | - | - | - | - | - | - | - | - | 0.61 | - | - | - | - | - | - | - | - | 0.7 | - | - | - | -2.46 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c17_15680V3.1 (Pp3c17_15680) | - | 3.97 | -1.07 | 3.13 | - | - | - | - | 0.81 | - | - | - | - | - | - | - | 1.5 | -0.54 | - | - | - | - | - | 3.51 | 1.74 | 1.62 | - | - | - | -4.49 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c1_14610V3.1 (Pp3c1_14610) | - | - | - | 5.06 | -0.07 | - | 2.27 | - | - | - | - | - | - | - | - | - | 2.12 | - | - | - | - | - | - | - | - | 2.19 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c1_17721V3.1 (Pp3c1_17721) | 1.06 | - | 2.29 | 4.15 | -0.11 | - | - | - | - | - | - | - | - | - | - | - | 2.14 | - | - | - | - | - | - | - | 0.5 | 2.99 | - | 1.42 | 1.66 | - | - | - | - | - | 0.7 | - | - | - | - | - | - | - | - | - | - | - | - | 0.13 |
Pp3c1_22290V3.1 (Pp3c1_22290) | - | - | - | 4.82 | 2.31 | 3.08 | 0.08 | 2.28 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.41 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c1_34860V3.1 (Pp3c1_34860) | -0.57 | - | 0.43 | 4.91 | - | - | - | - | 2.01 | - | - | - | - | - | - | - | 1.49 | - | - | - | - | - | - | - | - | 3.15 | - | - | - | -2.76 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c1_6060V3.1 (Pp3c1_6060) | - | - | -1.85 | 3.01 | 1.19 | 1.16 | -0.04 | - | 2.95 | -2.33 | - | - | - | 0.32 | -5.26 | - | 0.53 | - | - | 0.69 | 2.46 | 3.49 | - | -0.0 | 0.87 | - | - | - | 0.15 | -4.44 | - | - | - | - | - | - | - | - | - | - | - | - | -0.76 | - | - | - | -1.06 | -2.95 |
Pp3c1_6710V3.1 (Pp3c1_6710) | - | 2.37 | 0.94 | 4.44 | 1.05 | 1.1 | -0.5 | - | - | -2.19 | - | - | - | - | - | - | - | -0.29 | 0.54 | -1.16 | - | - | - | 3.11 | - | -1.7 | -0.46 | - | - | - | - | -1.89 | - | - | - | - | - | - | -1.05 | - | - | -1.37 | -1.29 | - | - | - | - | -3.1 |
Pp3c23_7540V3.1 (Pp3c23_7540) | - | 1.26 | 0.28 | 4.71 | 0.11 | 1.85 | 2.19 | 1.5 | - | - | -1.82 | 0.47 | - | - | -4.31 | 0.48 | 1.44 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.31 | - | - | - | - | - | - | - | - |
Pp3c26_3280V3.1 (Pp3c26_3280) | - | - | - | 4.98 | -2.04 | 1.14 | 2.84 | 2.56 | -0.43 | - | - | - | - | - | - | - | -2.44 | -5.55 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c27_4230V3.1 (Pp3c27_4230) | - | - | - | 5.2 | - | - | - | - | - | - | - | - | - | - | - | 2.77 | - | 2.06 | - | - | - | - | - | - | - | - | - | - | - | -2.11 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c27_8730V3.1 (Pp3c27_8730) | - | - | 1.45 | 4.66 | 1.98 | 1.63 | 0.93 | 2.48 | -1.53 | -4.06 | - | - | - | -2.61 | -4.79 | - | -1.89 | -0.6 | -1.64 | - | -2.45 | - | - | -2.78 | -1.9 | - | -3.17 | - | 0.71 | -4.01 | - | -3.07 | -4.76 | - | - | -2.33 | - | -2.7 | - | - | - | - | - | - | - | -1.65 | - | -1.81 |
Pp3c2_17200V3.1 (Pp3c2_17200) | - | 0.19 | 2.26 | 4.13 | - | - | - | - | 3.71 | - | - | - | - | - | - | - | 3.23 | 0.02 | - | - | - | - | - | - | - | 0.02 | - | - | - | -3.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c2_2580V3.1 (Pp3c2_2580) | - | - | - | 5.27 | - | - | - | - | - | - | - | 3.22 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c2_2610V3.1 (Pp3c2_2610) | - | - | - | 3.28 | -1.58 | -0.79 | - | -0.18 | - | 1.23 | -0.5 | 0.99 | -1.86 | -1.26 | -4.92 | - | -0.25 | -2.13 | - | - | - | - | - | - | 1.44 | 1.21 | -0.82 | -1.32 | -1.96 | -0.64 | 2.21 | 1.19 | -0.11 | -0.46 | - | -1.35 | 0.16 | -0.17 | - | -0.31 | 0.96 | 1.36 | 0.22 | -0.25 | -0.98 | 0.71 | 0.97 | -1.42 |
Pp3c3_17880V3.1 (Pp3c3_17880) | - | -0.34 | - | 3.86 | -2.72 | - | - | - | 3.53 | - | - | - | - | - | - | 3.28 | 2.47 | - | - | - | - | - | - | - | - | 2.51 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c3_2200V3.1 (Pp3c3_2200) | - | 3.22 | 2.36 | 3.72 | 0.97 | - | - | - | - | - | - | - | - | - | - | - | - | 1.96 | - | - | - | - | - | - | - | 3.86 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c3_33390V3.1 (Pp3c3_33390) | - | 4.28 | - | 3.55 | -1.49 | - | - | 2.97 | - | - | - | - | - | -0.38 | - | - | -0.51 | -0.1 | - | - | - | - | - | - | - | 2.62 | - | - | - | -3.58 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c4_12100V3.1 (SYT5) | -0.27 | 0.91 | -1.41 | 4.09 | 2.62 | 1.8 | 1.18 | 2.66 | 1.8 | -4.24 | - | - | - | - | -3.84 | -1.02 | -0.91 | 0.87 | - | 0.36 | -3.64 | -3.45 | - | -1.8 | -0.8 | -1.55 | -1.5 | - | - | -4.71 | -4.82 | -3.18 | -5.01 | -4.13 | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c4_5148V3.1 (Pp3c4_5148) | - | -0.52 | 1.47 | 4.38 | -0.75 | 1.23 | 0.96 | 0.19 | 1.28 | -3.51 | -3.07 | -3.18 | - | - | -2.02 | - | -0.4 | 0.75 | 0.08 | -0.7 | -0.73 | 0.04 | - | 0.11 | -0.97 | -1.21 | -1.12 | -1.79 | -1.8 | -1.0 | -2.83 | -3.64 | -2.43 | -2.44 | 0.2 | -0.26 | - | -2.67 | -1.07 | -2.16 | -3.21 | - | -3.18 | -1.42 | -1.7 | -2.62 | -1.02 | -1.51 |
Pp3c5_7020V3.1 (Pp3c5_7020) | - | - | - | 4.96 | - | 1.82 | - | 2.3 | 2.2 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.89 | - | - | - | -2.23 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c5_8616V3.1 (Pp3c5_8616) | 0.01 | -3.39 | 0.6 | 4.65 | -1.75 | 1.72 | 2.44 | 2.88 | -1.36 | -5.31 | - | - | - | -3.37 | -4.26 | -1.72 | -2.59 | -0.08 | - | -4.98 | -1.7 | -3.52 | - | -0.49 | -5.62 | -2.65 | -5.07 | -3.7 | -4.48 | -8.8 | - | -3.78 | -5.14 | -5.47 | -5.46 | - | -3.53 | -5.05 | - | - | - | - | - | -4.31 | - | -3.49 | -4.76 | -5.11 |
Pp3c6_20278V3.1 (Pp3c6_20278) | -3.52 | 0.87 | 1.71 | 4.49 | 0.29 | 1.28 | 1.25 | 0.6 | - | -4.17 | -2.74 | -3.93 | -5.49 | - | -4.5 | - | -0.33 | 1.61 | -0.25 | -1.79 | -5.52 | -1.0 | -1.61 | 2.46 | -0.6 | -1.64 | - | - | -6.01 | -6.62 | -6.97 | -5.99 | -6.85 | - | - | -5.76 | - | -5.42 | - | - | - | -4.61 | -5.46 | - | - | - | -5.76 | -7.65 |
Pp3c6_29040V3.1 (Pp3c6_29040) | - | - | -0.19 | 4.88 | 0.3 | - | 0.65 | 1.86 | - | - | - | - | - | - | - | - | - | 0.81 | - | - | - | - | 2.43 | 0.52 | - | 0.41 | - | - | - | - | - | 0.37 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c6_5570V3.1 (Pp3c6_5570) | - | - | - | 5.57 | - | - | - | - | - | - | - | - | - | - | -0.91 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c6_5920V3.1 (Pp3c6_5920) | - | 1.95 | -0.62 | 4.75 | 1.53 | 2.06 | - | - | - | -0.18 | - | 2.58 | - | - | -1.11 | - | - | - | - | - | - | -0.38 | - | - | - | - | - | - | - | - | -1.23 | -0.54 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -1.87 |
Pp3c7_17660V3.1 (Pp3c7_17660) | - | - | 0.95 | 5.14 | - | - | - | - | - | - | - | - | - | - | - | - | 2.61 | 1.26 | - | - | - | - | - | - | - | 1.16 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c7_18950V3.1 (Pp3c7_18950) | - | - | 0.84 | 4.5 | 0.26 | - | - | - | - | - | - | - | - | - | - | 4.31 | 1.36 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c7_4960V3.1 (Pp3c7_4960) | - | - | - | 4.96 | - | - | - | - | - | - | - | - | - | - | - | - | 1.98 | 1.88 | - | - | - | - | - | - | - | 3.19 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c8_12014V3.1 (Pp3c8_12014) | -1.43 | -0.94 | 0.7 | 4.32 | 0.6 | 1.51 | 2.45 | 2.48 | 0.88 | -8.11 | 1.19 | 1.62 | -5.48 | -5.39 | -6.69 | -0.03 | -3.07 | -0.64 | -8.86 | -5.13 | - | - | -5.74 | -0.89 | -3.35 | -3.1 | -4.18 | -7.01 | -4.78 | -7.53 | -7.0 | -3.1 | -7.34 | - | -5.88 | - | -5.57 | - | -6.61 | -7.38 | - | -7.11 | - | - | - | -7.28 | -7.08 | -8.04 |
Pp3c8_20380V3.1 (Pp3c8_20380) | - | 3.07 | - | 4.54 | - | 2.63 | - | - | - | - | - | - | - | - | - | - | 2.66 | - | - | - | - | - | - | - | - | 1.97 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c8_22969V3.1 (Pp3c8_22969) | - | - | 0.93 | 4.14 | -1.56 | 0.66 | - | -2.27 | 3.39 | - | -2.64 | - | -1.74 | - | -4.34 | 2.03 | - | - | -3.22 | -2.08 | - | -1.51 | - | - | 0.15 | 0.57 | -1.47 | -2.1 | 2.33 | -2.94 | - | - | - | -2.69 | -1.71 | - | - | - | - | - | - | - | -1.41 | - | - | -2.66 | - | 0.21 |
Pp3c8_3470V3.1 (FZR3) | - | - | - | 4.67 | 1.1 | 3.0 | 2.38 | - | - | - | - | - | - | - | - | - | 1.6 | 1.14 | - | - | - | - | - | - | - | - | - | - | - | -0.26 | - | - | 0.24 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c9_16660V3.1 (Pp3c9_16660) | - | - | - | 4.17 | -1.17 | - | - | - | 4.62 | - | - | - | - | - | - | 1.5 | 0.69 | - | - | - | - | - | - | -0.88 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Pp3c9_25209V3.1 (Pp3c9_25209) | 2.2 | 2.74 | -0.01 | 4.26 | -1.23 | -1.75 | -0.3 | 0.01 | -0.56 | -1.8 | -2.11 | -2.14 | -3.72 | -3.54 | -1.8 | 1.83 | -0.59 | -2.56 | 0.47 | -0.69 | -1.15 | -2.02 | - | -1.72 | -2.05 | -1.0 | -3.5 | -1.31 | -0.92 | -2.0 | -1.88 | -2.06 | -3.05 | -2.23 | -2.36 | -2.16 | -1.61 | -3.08 | -3.31 | -3.1 | - | -3.17 | -3.56 | -4.37 | -1.97 | -4.51 | -3.2 | -2.41 |
Pp3c9_3790V3.1 (Pp3c9_3790) | - | - | 3.06 | 5.0 | - | - | - | - | - | - | - | - | - | - | - | - | 2.93 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.