Heatmap: Cluster_49 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-8.28 -7.36 1.99 -5.94
-1.92 -1.98 1.72 -2.44
-3.51 -4.94 1.96 -
-7.99 -7.25 1.99 -5.39
-2.23 -2.16 1.8 -3.77
-4.5 -2.94 1.88 -2.78
-3.66 -2.79 1.79 -1.69
Pnu_g11778 (SHS1)
-0.64 -0.82 1.2 -1.0
-8.06 -8.79 1.99 -6.79
- -3.89 1.89 -2.2
-2.4 -2.38 1.78 -2.45
Pnu_g16189 (PUB12)
-6.09 -4.21 1.93 -3.04
-5.87 -4.97 1.94 -3.05
- -9.07 1.99 -5.84
Pnu_g16983 (CHR1)
-3.12 -4.19 1.89 -2.91
Pnu_g17512 (CCX4)
-5.87 -4.21 1.89 -2.25
-4.37 -2.0 1.76 -1.72
- - 2.0 -
- - 2.0 -
- - 2.0 -7.13
- - 2.0 -
Pnu_g21414 (MCM5)
-2.87 -4.95 1.88 -2.66
- - 2.0 -
- - 2.0 -
-3.66 - 1.97 -
- - 1.99 -5.14
- - 2.0 -
-3.44 - 1.95 -4.42
-4.39 - 1.98 -
Pnu_g21783 (MMT)
-4.88 -5.4 1.97 -5.28
-4.52 - 1.98 -
- - 2.0 -6.86
- - 2.0 -6.69
-4.33 -6.86 1.97 -4.98
-7.04 -8.15 1.99 -6.3
-3.81 -3.64 1.85 -2.09
-3.4 - 1.92 -2.95
-1.58 -1.92 1.73 -3.42
Pnu_g22337 (GSQ5)
-10.36 -8.31 2.0 -12.25
- - 2.0 -7.09
Pnu_g23040 (SDG15)
-5.04 -3.49 1.95 -6.16
-2.65 -3.7 1.91 -
Pnu_g23154 (ICL)
-4.78 -3.21 1.95 -
- - 2.0 -8.17
- - 2.0 -
Pnu_g23645 (GA5)
- - 2.0 -
- - 2.0 -
Pnu_g23699 (MDR1)
-3.93 -3.94 1.92 -3.56
- - 2.0 -
- - 2.0 -
-4.52 -4.1 1.96 -5.59
- - 1.98 -3.92
- - 1.92 -2.3
-9.97 - 2.0 -11.38
-10.45 -9.24 2.0 -
-2.24 -5.89 1.86 -2.81
- - 2.0 -
-14.39 - 2.0 -14.45
-8.39 - 2.0 -
- - 2.0 -
-2.77 -3.0 1.86 -3.38
- - 2.0 -
Pnu_g25142 (CAL)
- - 2.0 -
Pnu_g25210 (UGT85A3)
-6.59 -6.61 1.96 -3.55
- - 2.0 -7.37
-13.78 - 2.0 -14.92
-5.3 -5.11 1.98 -
- -3.57 1.96 -4.71
- - 2.0 -
-4.75 -4.65 1.84 -1.58
Pnu_g25641 (MYB4)
- - 2.0 -10.03
- - 2.0 -
- - 2.0 -
-5.41 -4.39 1.88 -2.01
Pnu_g25879 (RBOHF)
-4.27 -4.98 1.93 -3.07
- - 1.99 -5.99
-14.75 -16.43 2.0 -14.72
Pnu_g25986 (NRT1.7)
- - 2.0 -
- - 2.0 -
- - 2.0 -
- - 2.0 -
- - 2.0 -10.65
- - 2.0 -
-8.77 -11.15 2.0 -8.28
- - 2.0 -
-10.02 - 2.0 -
- - 1.96 -3.11
-5.71 -6.59 1.98 -6.3
-4.06 -5.07 1.97 -
- -6.64 1.98 -4.41
-7.92 -11.76 2.0 -9.4
-8.98 -9.82 2.0 -
- - 2.0 -
-9.63 -9.5 2.0 -10.62
- -5.05 1.99 -
Pnu_g27666 (HTB4)
-5.63 -7.08 1.98 -6.02
Pnu_g27667 (HTB4)
-3.08 -4.76 1.88 -2.65
Pnu_g27692 (SD2-5)
-5.34 -7.51 1.98 -5.24
- -6.37 2.0 -
Pnu_g27852 (NRT2.5)
-2.02 -2.62 1.83 -4.7
- - 2.0 -8.1
- -9.57 2.0 -9.76
-5.04 -4.98 1.93 -3.12
- - 2.0 -
-10.1 - 2.0 -
-8.61 -6.72 2.0 -9.66
- - 2.0 -
- - 1.98 -4.45
-8.14 - 2.0 -
- - 2.0 -
-3.28 -3.14 1.91 -5.09
-3.06 -3.03 1.91 -
- - 2.0 -9.63
Pnu_g28971 (DSI-1VOC)
- - 2.0 -
- - 2.0 -
-2.59 -3.04 1.84 -3.02
-2.07 -2.62 1.8 -3.25
-3.41 - 1.89 -2.4
-6.07 -6.28 1.99 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.