Heatmap: Cluster_50 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
Pnu_g03425 (MPK6)
-0.98 -1.58 -0.67 1.34
-2.4 -2.27 -1.23 1.67
-1.01 -1.89 -0.93 1.44
-0.76 -0.19 -0.92 1.0
Pnu_g06553 (CESA9)
-1.06 -1.99 -1.71 1.57
Pnu_g07086 (RAT4)
-1.58 -3.26 -5.32 1.82
- - - 2.0
Pnu_g14361 (NTRB)
-6.57 -4.97 -5.12 1.97
- - - 2.0
- - - 2.0
- - - 2.0
Pnu_g14516 (TRX2)
-5.45 -2.19 - 1.91
- -4.43 - 1.98
- - - 2.0
- - - 2.0
Pnu_g15015 (TET8)
-1.15 -2.49 -2.72 1.69
- -0.78 - 1.77
- - - 2.0
- - - 2.0
- -4.15 - 1.98
-3.09 -3.95 -2.59 1.87
-1.92 - - 1.9
-1.94 -3.34 -6.26 1.86
-2.04 -3.54 - 1.88
Pnu_g16041 (RAT4)
-2.4 -5.27 -6.08 1.91
-2.73 -2.67 -2.18 1.8
- - - 2.0
-2.8 -1.44 - 1.8
- -2.12 - 1.91
- - - 2.0
-3.33 - - 1.96
-10.41 -10.19 - 2.0
- - - 2.0
-4.21 -8.13 -5.4 1.97
- - - 2.0
Pnu_g17490 (GATA12)
-3.17 -5.78 -5.34 1.94
-3.94 -4.94 - 1.96
- -2.55 - 1.94
-2.27 - - 1.92
Pnu_g19309 (ATH-A)
-1.02 -2.25 -3.06 1.67
- - - 2.0
-1.42 -7.28 - 1.86
- - - 2.0
- -2.34 - 1.93
- - - 2.0
-4.98 -2.28 -4.18 1.89
-3.52 -3.03 -1.19 1.74
Pnu_g21024 (CAT2)
-5.59 -5.53 - 1.98
-1.25 - - 1.84
Pnu_g30874 (GUS1)
-2.42 - -3.46 1.9
Pnu_g32258 (NWS2)
-0.99 -2.42 -2.4 1.64
Pnu_g32773 (RAT4)
-2.31 -6.46 -6.08 1.92
-1.07 -1.84 -1.25 1.5

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.