Heatmap: Cluster_65 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
-2.66 -2.05 1.58 -0.71
-0.59 0.16 0.92 -1.63
Pnu_g05179 (UNE14)
-1.81 -2.56 1.75 -2.52
-0.94 -1.25 1.56 -3.24
-1.95 -1.06 1.6 -2.08
-2.58 -1.91 1.83 -
Pnu_g10135 (CYP710A1)
-2.08 -1.08 1.55 -1.48
-2.5 -1.32 1.75 -4.06
-0.9 -2.18 1.49 -1.22
Pnu_g10937 (GST12)
-1.27 -2.73 1.57 -1.13
-1.18 -1.39 1.39 -0.84
Pnu_g11818 (KCS4)
-1.02 -1.4 1.36 -0.81
-1.51 -2.35 1.65 -1.66
Pnu_g12809 (KCS4)
-0.57 -1.26 1.46 -2.71
-0.48 -1.64 1.29 -0.98
-3.66 -4.4 1.77 -1.12
-3.9 -2.76 1.8 -1.77
-0.28 -0.84 1.07 -0.95
-4.9 -4.03 1.76 -0.94
Pnu_g17374 (HEC3)
-0.67 -0.55 0.91 -0.31
Pnu_g17593 (MAPKKK15)
-2.68 -1.92 1.53 -0.52
-1.65 -0.77 1.16 -0.21
-0.82 -4.21 1.68 -2.53
- -2.26 1.77 -1.36
-0.11 -0.41 0.65 -0.41
-5.39 -3.89 1.9 -2.46
-3.06 -2.03 1.67 -1.12
Pnu_g19582 (JAI3)
-3.39 -4.33 1.76 -1.08
- -3.22 1.56 -0.08
- - 2.0 -
-3.0 -1.45 1.76 -3.02
-1.38 -2.33 1.53 -0.94
-3.78 - 1.97 -
Pnu_g21574 (CML42)
-1.21 -2.56 1.72 -3.31
-1.88 - 1.79 -1.84
- - 1.83 -1.19
Pnu_g21886 (AGL30)
- - 2.0 -
-0.23 -0.44 0.76 -0.48
-1.15 -1.63 1.43 -0.89
-2.89 -5.49 1.94 -
-1.72 -4.35 1.83 -3.46
-5.64 -2.38 1.62 -0.5
-1.96 -3.55 1.87 -
-1.9 -1.5 1.73 -3.91
Pnu_g22788 (HA9)
-0.57 -2.18 1.41 -1.15
-1.08 -2.48 1.45 -0.69
-1.19 -1.84 1.71 -6.12
-3.32 - 1.92 -3.17
-4.94 - 1.95 -3.34
-3.23 -3.55 1.68 -0.74
-2.62 -2.45 1.87 -
- - 1.96 -3.19
-0.72 -0.25 1.23 -2.29
- - 2.0 -
-2.47 -1.25 1.46 -0.63
-0.93 -0.25 1.13 -1.17
-1.06 -3.32 1.74 -3.84
Pnu_g23481 (PMA)
-0.95 -1.38 1.26 -0.52
-2.76 - 1.95 -
-1.11 -3.57 1.67 -1.84
Pnu_g23848 (OMT1)
-5.81 -6.5 1.98 -5.56
- - 2.0 -
-1.22 -4.21 1.81 -
-3.66 - 1.97 -
Pnu_g24318 (RIN4)
-2.81 -1.99 1.81 -3.19
-3.11 -3.68 1.74 -1.12
-2.31 -1.59 1.47 -0.51
-5.14 -6.25 1.97 -4.37
Pnu_g24420 (PHT3;3)
-1.73 -2.54 1.7 -1.86
-0.29 -0.27 0.59 -0.24
-1.28 -1.23 1.55 -2.1
-5.5 - 1.99 -
-3.74 -5.64 1.97 -
-3.57 -2.17 1.87 -4.72
-3.84 -3.28 1.92 -4.74
-0.41 - 1.57 -1.85
-2.52 -2.01 1.48 -0.33
-1.3 -2.44 1.77 -6.82
-1.36 -2.88 1.78 -4.56
-6.33 -7.82 1.95 -3.14
-21.87 -18.99 1.99 -4.83
-0.93 -2.32 1.42 -0.76
-2.35 -2.66 1.85 -5.15
-2.55 - 1.91 -4.04
-3.56 - 1.81 -1.33
-2.13 -3.12 1.82 -3.08
Pnu_g26142 (GolS4)
- - 2.0 -
Pnu_g26143 (GolS4)
-8.14 - 2.0 -7.1
-1.81 - 1.89 -
Pnu_g26269 (LOX3)
-4.55 -4.91 1.85 -1.62
-3.96 -4.0 1.86 -2.1
-2.58 -3.83 1.91 -
-0.88 -0.86 1.06 -0.29
-6.6 -6.51 1.99 -
Pnu_g26671 (CHS)
-1.09 -2.2 1.4 -0.58
-2.76 -5.75 1.92 -4.48
-1.81 -3.51 1.81 -3.08
-1.58 -2.49 1.78 -4.06
Pnu_g27407 (GSTU21)
-4.07 - 1.97 -5.64
- -1.05 1.81 -
Pnu_g27452 (DREB2)
-3.72 -3.41 1.64 -0.5
Pnu_g27456 (GST8)
-3.15 -4.97 1.92 -3.59
-1.88 -3.26 1.85 -6.78
Pnu_g27773 (PSF1)
-0.34 -0.4 0.81 -0.52
- -3.1 1.92 -3.18
- - 2.0 -
-1.53 -3.56 1.72 -1.89
-3.42 -5.0 1.95 -
- - 2.0 -
-1.28 - 1.84 -
-1.49 -1.98 1.76 -
-2.16 -2.96 1.71 -1.44
-1.45 -1.06 1.59 -2.82
-1.6 -3.36 1.84 -
-0.74 -2.31 1.66 -4.71
-1.43 -1.35 1.46 -1.05
-2.45 -1.7 1.41 -0.23
Pnu_g30828 (MAPKKK15)
-3.07 -3.03 1.79 -1.71
-1.69 -1.4 1.71 -4.55
-0.06 -0.28 0.43 -0.19
-1.11 -0.69 1.08 -0.33
-3.95 -3.27 1.78 -1.29
Pnu_g33421 (GST8)
-0.94 -3.6 1.67 -2.21
-1.99 -2.03 1.69 -1.82
-1.43 -2.21 1.65 -1.85

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.