Heatmap: Cluster_34 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
1.07 -0.03 -0.11 -
Pnu_g01385 (HTA5)
0.7 -0.25 0.53 -3.43
1.05 0.28 -0.54 -5.51
1.1 -1.28 0.44 -3.66
0.78 -0.07 0.29 -3.26
1.16 -0.69 0.06 -3.22
0.81 -1.13 0.8 -4.17
0.87 0.04 -0.03 -2.56
0.91 -0.25 0.18 -2.74
1.06 -0.0 -0.12 -
1.14 -0.58 0.07 -3.83
1.15 -0.25 -0.21 -3.69
1.19 -1.1 0.19 -3.03
0.44 0.01 0.71 -
1.12 -0.88 0.35 -
0.85 -1.14 0.44 -1.39
Pnu_g05555 (AOX1D)
1.14 -0.94 0.22 -3.22
0.71 -0.29 0.34 -1.85
1.0 -0.44 0.15 -2.78
0.78 -0.81 0.54 -1.96
1.02 -0.07 -0.26 -2.42
0.81 0.08 0.11 -3.17
0.85 -0.23 0.15 -2.07
1.01 -0.28 0.16 -4.33
Pnu_g09389 (PHT5)
1.23 -1.53 0.25 -3.14
1.33 -0.19 -0.74 -
Pnu_g09622 (LHCA1)
0.86 -0.22 0.28 -3.07
1.2 -0.21 -0.37 -3.71
0.86 -0.58 0.26 -1.64
0.72 0.1 0.24 -3.25
1.06 -1.38 0.59 -5.44
1.1 -0.27 -0.01 -4.75
Pnu_g11043 (LHCB2)
1.43 -1.72 -0.2 -2.93
1.32 -1.68 0.22 -4.81
1.48 -1.08 -0.42 -
1.31 -4.27 0.55 -
1.19 -0.08 -0.52 -3.77
0.59 -0.36 0.38 -1.28
1.13 -2.05 0.65 -
1.01 -1.36 0.67 -
0.87 -1.28 0.4 -1.2
0.87 -0.15 0.21 -3.13
1.03 -0.07 -0.08 -4.13
0.66 0.13 0.3 -3.4
0.85 -0.49 0.39 -2.55
0.58 -0.14 0.12 -0.97
1.02 -1.05 -0.21 -0.66
1.18 -0.08 -0.58 -3.01
0.87 0.0 0.02 -2.67
1.0 0.01 -0.13 -3.73
1.08 -0.43 0.19 -
0.92 0.23 -0.21 -3.69
1.16 -0.87 0.28 -
1.34 -0.89 -0.11 -
0.77 0.17 -0.04 -2.27
0.9 0.02 -0.06 -2.62
1.22 -0.18 -0.63 -2.79
Pnu_g21715 (PHT6)
1.04 -1.38 0.64 -
1.25 -1.94 0.37 -3.93
0.96 -1.08 0.64 -5.66
Pnu_g21997 (LHCB2)
1.17 -2.17 0.57 -4.28
1.38 -1.8 0.14 -
1.1 -0.77 0.15 -2.69
1.02 -0.17 0.11 -
Pnu_g22256 (PGK)
0.91 -0.39 0.2 -2.25
1.13 -2.06 0.55 -3.24
1.07 0.02 -0.29 -4.03
1.1 -1.54 0.52 -3.7
0.85 -0.03 0.03 -2.35
1.4 -3.59 0.35 -
0.85 -0.43 0.5 -4.5
1.28 -2.48 0.47 -
Pnu_g24880 (LHCB2)
1.18 -1.74 -0.05 -1.08
1.43 -2.65 0.2 -
0.74 -0.02 0.13 -1.99
0.96 -0.29 0.23 -4.2
0.77 -0.07 0.38 -4.41
0.95 -0.67 0.5 -5.35
0.89 -1.59 0.73 -2.68
0.85 -0.48 0.42 -2.83
1.4 -1.1 -0.18 -5.63
0.99 -1.08 0.44 -2.47
0.75 -0.2 0.1 -1.41
1.47 -1.91 -0.04 -
1.31 -3.68 0.44 -3.7
1.19 -1.09 -0.24 -1.32
1.2 -1.79 0.51 -
1.2 -2.68 0.42 -2.28
1.17 -1.95 0.37 -2.35
1.32 -0.22 -0.63 -
1.31 -2.5 0.22 -2.41
1.0 -0.91 0.51 -4.45
Pnu_g28748 (SBE2.2)
1.31 -1.81 0.31 -
1.0 -2.83 0.58 -1.45
1.28 -0.88 -0.03 -4.21
0.91 0.13 -0.15 -3.05
1.26 -0.12 -0.56 -
1.03 -0.59 0.21 -2.83
1.36 -2.42 0.32 -
Pnu_g29158 (FD1)
1.59 -3.25 -0.17 -
1.36 -1.14 -0.18 -3.25
0.63 -0.5 0.74 -3.75
1.14 0.02 -0.35 -
1.43 -2.03 0.05 -5.26
0.97 0.22 -0.33 -3.59
0.99 -0.58 -0.28 -0.94
0.83 -0.45 0.54 -4.92
0.87 0.12 0.0 -3.61
Pnu_g29655 (HTA10)
0.69 -0.25 0.49 -2.86
Pnu_g29711 (PHT5)
0.86 0.01 0.14 -3.81
1.2 -0.9 -0.06 -2.29
1.36 -3.46 0.42 -
0.92 -0.48 0.43 -4.6
1.17 -0.14 -0.36 -4.27
1.21 -1.46 0.32 -3.86
1.09 -0.28 0.07 -
1.32 -1.79 0.08 -2.73
0.93 -0.46 0.34 -3.25
1.37 -1.0 -0.14 -
1.12 0.14 -0.65 -3.43
1.7 - -0.42 -
1.19 -1.58 0.28 -2.58
Pnu_g31027 (LHCB2)
0.97 -0.55 -0.27 -0.93
1.62 -3.19 -0.29 -
0.91 -0.26 0.2 -2.85
1.15 -1.83 0.55 -5.12
1.58 -5.83 -0.03 -5.56
1.6 -4.26 -0.12 -
1.58 -3.46 -0.12 -
1.3 -2.57 0.26 -2.65
1.15 -0.26 -0.09 -
0.9 -0.04 -0.02 -2.51
1.46 - 0.07 -2.41
0.85 0.15 -0.08 -2.84
Pnu_g32314 (GRP2B)
1.53 -2.79 -0.38 -2.27
1.53 -2.16 -0.16 -
Pnu_g32597 (UBQ6)
1.37 -2.01 0.19 -5.5
0.88 -0.04 0.11 -3.26
1.11 -1.14 0.36 -3.36
0.94 0.26 -0.36 -3.3
1.17 -0.66 0.08 -4.09
0.93 -0.44 0.3 -2.96
0.95 0.09 -0.14 -3.31
1.27 - 0.67 -
1.09 -1.3 0.11 -1.35
0.93 -0.66 0.01 -1.14
1.26 -3.71 0.22 -1.51
1.31 -1.61 0.19 -4.47
1.25 -1.6 0.27 -3.63
1.55 -2.61 -0.14 -
1.68 -2.9 -0.57 -
0.9 -0.08 0.14 -3.64
1.36 -1.14 -0.08 -4.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.