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Heatmap: Cluster_154 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.37 0.02 -0.01 0.07 0.07 0.51 -0.16 -0.5 -0.17 0.09 0.08 -0.17 0.62 0.64 0.17 0.99 0.04 -0.1 0.01 -2.97 -3.83 -1.48 1.09 1.07 -1.85 -0.74 -0.81 -0.4 -0.2 -0.17 -0.3 -0.09
Smo102667 (AGC1.5)
 -0.18 -0.46 -0.57 -0.62 -0.01 -0.52 -0.39 -0.35 0.23 0.22 -0.05 -0.43 -0.64 1.89 0.97 0.79 0.01 -0.1 1.08 - -8.43 - 0.68 1.04 -2.93 -0.51 -1.59 -1.73 0.62 0.78 -0.46 -0.77
Smo107911 (TAF7)
 -0.37 -0.29 -0.29 0.07 -0.07 -0.05 -0.24 -0.25 0.09 -0.31 -0.26 -0.43 0.46 0.7 1.04 0.69 0.14 0.03 0.62 -2.25 -1.59 -0.76 0.37 0.45 -0.49 -0.28 0.04 -0.11 0.16 -0.04 -0.23 -0.1
0.3 0.27 -0.06 0.25 0.15 0.13 -0.18 -0.12 -0.13 -0.06 -0.17 -0.11 0.6 1.06 0.66 0.71 -0.04 -0.32 0.46 -1.4 - -5.66 0.36 0.31 -4.2 -0.07 -0.06 0.08 -0.13 -0.11 0.26 -0.37
Smo123364 (MTA)
 -0.16 -0.18 -0.19 0.03 -0.01 0.19 -0.04 0.13 0.11 -0.14 -0.13 -0.42 0.45 0.62 1.55 0.92 -0.25 -0.14 0.19 -1.85 -2.43 -2.73 -0.18 0.02 -0.31 0.24 0.37 0.28 -0.16 0.04 -1.05 -1.19
-0.08 -0.02 0.08 0.16 0.19 0.03 -0.04 -0.19 -0.08 -0.07 -0.19 -0.31 0.15 1.27 1.24 0.49 -0.31 0.04 -0.04 -2.07 -0.07 -0.0 0.44 0.45 -1.47 -0.57 -0.85 -0.78 -0.34 -0.35 -0.42 -0.35
-0.24 -0.32 -0.34 -0.31 -0.27 -0.27 -0.39 -0.38 -0.0 -0.08 -0.04 -0.19 0.77 1.44 0.85 0.88 -0.83 -0.63 0.54 -2.64 -2.16 -1.32 0.75 1.09 -1.65 -0.17 -0.77 -0.91 -0.38 -0.03 0.37 0.14
Smo142541 (EIF5A)
 -0.3 -0.29 -0.33 -0.2 -0.22 -0.17 -0.35 -0.26 -0.2 -0.23 -0.23 -0.32 0.65 0.84 1.17 0.78 0.02 0.12 0.6 -1.13 -0.84 -0.65 0.49 0.62 -1.2 -0.33 -0.9 -0.97 -0.02 0.03 -0.01 0.2
Smo146310 (RABA1f)
 -0.12 0.3 0.26 0.08 0.06 0.08 0.09 -0.06 -0.06 0.01 0.18 -0.03 0.44 0.95 1.24 0.64 0.01 0.04 -0.11 -2.0 -1.39 -0.5 0.5 0.52 -1.72 -0.84 -1.45 -1.01 -0.19 -0.0 -0.51 -0.43
-0.41 -0.46 -0.69 -0.57 -0.78 -0.55 -0.37 -0.49 -0.19 -0.2 -0.13 -0.26 0.67 1.67 1.71 0.93 -0.64 -0.25 0.76 -6.82 -3.2 - -0.5 0.04 -1.64 -0.02 -0.46 -0.85 -0.05 0.23 0.38 0.98
-0.16 -0.11 -0.08 -0.15 0.06 0.01 -0.14 0.02 -0.03 -0.02 -0.14 -0.31 0.96 1.06 0.06 1.0 -0.43 -0.23 0.16 -1.81 -2.88 -3.43 0.72 0.88 -2.67 -0.22 -0.3 -0.52 -0.13 -0.06 0.27 0.34
Smo16804 (OTP84)
 -0.23 -0.32 -0.81 -0.39 -2.13 0.48 0.49 0.24 0.46 1.03 -0.62 0.31 0.35 0.66 1.47 0.34 -0.54 -1.14 0.32 - - - 0.12 0.09 -1.54 -0.23 0.04 -0.78 -0.24 0.38 0.61 0.65
Smo172992 (ATB2)
 0.63 0.6 0.37 0.12 -0.21 -0.25 -0.28 -0.84 -0.51 -0.32 -0.29 0.27 -0.63 1.33 -1.31 0.32 -0.29 -0.12 0.61 -6.53 -1.63 -8.23 1.14 1.69 -0.57 -2.19 -1.04 -1.07 -0.57 -0.42 0.75 0.17
0.02 0.11 -0.04 0.11 -0.09 -0.05 0.03 -0.1 0.14 0.11 0.04 -0.09 -0.34 1.09 1.26 0.38 0.17 0.03 0.18 -3.52 -1.32 -2.91 0.61 0.56 -0.31 -0.84 -1.0 -0.77 0.1 0.25 -0.34 -0.3
Smo177513 (HMG1)
 0.48 0.61 0.24 0.12 0.04 -0.0 -0.05 -1.28 -1.06 -0.9 -0.81 -0.53 -0.69 1.8 1.51 0.87 0.39 0.93 -0.3 -3.43 -4.15 -2.71 0.34 0.96 -2.03 -2.47 -1.51 -0.99 -0.16 0.45 -0.68 -0.64
Smo183457 (AtATG18a)
 0.22 0.44 0.29 0.32 -0.2 0.31 0.06 -0.14 -0.22 -0.08 -0.28 -0.08 0.61 1.34 0.84 1.26 0.13 -0.15 0.59 -3.21 -4.24 -3.25 0.09 0.08 -3.77 -0.57 -0.33 -0.05 -0.13 0.13 -1.54 -1.38
Smo22294 (ABI8)
 0.02 0.21 -0.02 -0.04 0.02 0.11 -0.02 -0.36 -0.28 -0.07 -0.45 -0.27 0.45 1.11 0.88 0.9 -0.21 -0.1 0.35 -0.85 -0.62 -3.93 0.73 0.69 -1.22 -0.78 -0.91 -1.03 -0.07 -0.07 -0.2 0.05
Smo227145 (EMB3003)
 -0.16 0.13 0.13 0.16 0.14 0.28 0.27 0.01 0.05 -0.11 -0.28 -0.46 0.41 0.98 1.5 0.59 -0.22 0.31 0.67 -4.25 -1.83 -2.37 -0.55 0.03 -2.05 -0.64 0.04 0.14 -0.35 -0.05 -0.68 -0.27
0.28 0.38 -0.44 -0.54 -0.7 -1.04 -1.15 -1.45 -1.09 -0.79 -0.8 -0.63 1.57 2.68 2.89 1.62 -1.47 -3.6 -2.26 - -5.59 - -2.92 -1.55 -2.82 -2.3 -1.32 -2.18 -0.96 -0.9 -1.12 -1.28
Smo232085 (GOS12)
 -0.09 -0.06 -0.13 -0.01 -0.02 0.17 -0.13 -0.09 -0.04 -0.22 -0.3 -0.37 0.56 1.24 1.42 0.74 -0.28 -0.49 0.31 -1.47 -0.79 -0.39 0.17 0.22 -1.04 -0.45 -0.56 -0.52 -0.22 -0.11 -0.5 -0.35
Smo236309 (ADH)
 -0.57 -0.72 -0.63 -0.66 -0.58 -0.43 -0.24 -0.47 -0.38 -0.63 -0.71 -0.83 0.16 1.66 2.02 0.64 -0.09 0.9 0.91 -3.58 -4.34 -4.04 1.0 0.59 -2.06 -0.43 -0.68 -0.35 0.1 0.08 -0.61 -1.35
Smo266803 (RHM1)
 -0.17 0.0 0.03 -0.01 0.18 0.16 -0.16 -0.35 -0.43 -0.46 -0.47 -0.75 0.05 1.38 1.88 0.82 -0.36 -0.24 1.16 -2.06 -2.75 -3.26 -0.12 0.0 -1.44 -0.24 0.15 0.17 -0.64 -0.41 -0.84 -0.76
-0.01 0.06 -0.14 0.05 -0.66 0.12 -0.03 -0.16 0.11 0.13 -0.36 -0.31 0.71 0.95 1.42 0.8 -0.06 0.02 0.48 -5.55 -3.76 -2.29 0.12 0.29 -0.18 -0.65 -0.26 -0.83 0.31 0.08 -0.4 -0.43
-0.9 -0.45 -0.47 0.2 0.04 0.07 0.12 -0.16 -0.24 -0.68 -0.72 -0.92 0.57 0.89 0.77 1.08 0.33 0.19 1.04 -4.77 -3.02 - 0.01 0.14 0.05 -0.12 0.52 0.36 0.1 0.25 -0.59 -0.45
0.05 0.03 -0.22 -0.03 -0.19 -0.11 -0.17 -0.17 -0.23 -0.21 -0.2 -0.3 0.68 1.22 1.63 0.99 0.09 0.36 0.49 -5.56 - -8.68 0.39 0.29 -3.01 -1.48 -0.94 -0.95 0.16 0.11 -0.05 0.15
0.11 -0.07 -0.3 -0.16 0.14 0.06 -0.48 -0.48 0.16 0.18 0.4 0.34 0.23 1.18 -0.21 -0.19 -0.14 -0.09 0.68 -1.94 -0.89 -5.12 0.88 1.23 -0.77 -0.24 -1.38 -1.34 0.15 -0.0 -0.11 -0.05
-0.11 -0.59 -0.5 -0.44 -0.32 -0.44 0.12 0.13 0.23 0.15 0.12 0.23 0.69 0.68 1.11 0.7 -0.47 -0.34 0.29 -4.24 -2.32 -3.41 0.06 0.48 -0.71 -0.03 -0.38 -0.42 0.17 0.24 0.4 0.54
Smo425072 (RGTA1)
 -0.26 -0.22 -0.05 -0.13 0.14 0.01 -0.12 -0.18 -0.07 -0.29 -0.4 -0.45 0.73 1.0 1.27 0.9 -0.03 -0.19 0.76 -3.08 -2.82 -2.65 0.2 0.24 -1.78 0.38 0.02 0.26 0.04 -0.02 -0.81 -0.66
-1.03 -0.95 -0.91 -1.16 -1.02 0.33 -0.56 -0.91 -0.76 -1.02 -0.83 -0.59 1.01 2.39 2.19 1.39 -1.55 -4.43 0.02 - - - 1.76 1.62 -2.41 -3.36 -3.06 - -1.2 -0.98 -1.02 -0.84
0.08 0.12 -0.14 -0.13 -0.27 0.04 -0.29 -0.51 -0.02 0.14 -0.24 -0.1 0.42 1.16 1.61 0.49 -0.05 -0.02 0.06 -1.48 -0.96 -1.19 0.13 0.01 -0.39 -1.05 -0.89 -0.82 -0.23 -0.17 0.0 0.32
-0.29 -0.35 -0.23 -0.31 -0.04 -0.39 -0.17 -0.32 -0.41 -0.4 -0.18 -0.64 0.46 0.94 1.17 0.87 0.14 0.05 0.59 -4.7 -1.41 -6.05 0.24 0.21 -1.73 0.31 0.51 0.58 0.11 0.19 -0.21 -0.05
Smo437552 (RGP1)
 -0.02 0.23 -0.03 -0.03 -0.2 0.12 -0.14 -0.62 -0.11 -0.22 -0.09 -0.26 -0.09 0.85 1.66 0.77 0.41 0.47 0.19 -1.1 -0.92 -1.64 0.49 0.67 -0.8 -1.44 -1.23 -0.83 -0.19 0.09 -0.82 -0.71
0.41 0.07 -0.17 -0.1 -0.03 -0.22 -0.38 -0.24 0.08 0.26 0.22 0.22 1.24 0.77 0.44 1.43 -0.47 -1.18 0.03 -5.68 -2.86 -7.76 0.29 0.56 -1.46 0.27 -0.65 -0.64 -0.05 -0.11 -0.13 -0.11
Smo438351 (UXS5)
 -1.12 -0.33 -0.12 0.02 -0.14 -0.11 -0.08 -0.5 -0.51 -0.8 -0.85 -1.06 0.1 1.5 1.63 0.59 0.35 0.21 0.14 -2.47 -2.21 -1.38 1.39 0.87 -0.39 -0.72 -0.85 -0.3 -0.12 0.14 -0.94 -1.14
-0.92 -0.98 -0.74 -0.9 -0.72 -1.01 -2.03 -1.61 -1.38 -0.98 -0.52 -0.93 0.46 2.73 2.71 1.87 -1.97 -0.93 0.16 -0.64 -2.36 - -1.35 -1.15 -1.76 0.55 -1.05 -1.34 -1.24 -1.16 -1.4 -1.43
0.24 0.14 0.26 -0.03 -0.18 -0.01 -0.31 -0.21 -0.18 0.16 0.03 -0.09 0.82 0.9 1.43 0.74 -0.12 0.18 0.43 -4.01 -0.94 -1.05 0.38 0.68 -1.8 -1.11 -0.91 -1.32 -0.45 -0.66 -0.32 -0.31
Smo443337 (ATCES1)
 0.14 0.09 0.04 -0.08 0.19 0.16 -0.24 -0.07 -0.26 -0.24 -0.19 -0.36 0.97 0.77 0.38 1.3 -0.19 -0.05 0.25 -2.84 -2.15 -3.31 0.24 0.44 -0.86 0.03 -0.45 -0.24 -0.12 0.16 -0.07 -0.23
0.48 0.28 0.02 0.0 0.02 0.1 -0.2 0.01 -0.06 -0.04 0.23 0.21 0.37 0.63 0.77 0.91 -0.07 0.11 0.15 -0.9 -4.37 -3.05 0.34 0.28 -1.13 -0.21 -0.54 -0.38 0.14 0.32 -0.7 -0.65
0.05 0.06 0.13 0.13 -0.06 0.26 -0.01 -0.11 -0.2 0.08 -0.4 -0.26 0.32 0.85 1.41 0.71 0.18 0.35 0.6 - -2.81 - 0.12 0.17 -1.32 -0.85 -0.68 -0.31 0.32 0.33 -0.34 -0.29
0.44 -0.12 -0.17 -0.01 0.27 0.22 -0.21 -0.16 0.01 -0.04 -0.33 -0.15 1.2 1.22 0.74 1.15 -0.41 -0.33 0.5 -7.21 -3.35 -4.74 0.62 0.83 -3.62 -1.69 -0.98 -0.84 -0.05 0.09 -0.3 -0.33
0.5 0.58 0.24 0.08 -0.03 0.38 -0.13 0.01 -0.04 0.01 0.04 -0.1 0.8 0.5 0.74 0.64 -0.05 -0.57 0.27 - - - 0.77 1.04 -1.87 -0.83 -0.63 -0.36 -0.22 0.03 -0.4 -0.29
0.04 0.16 -0.04 0.18 0.32 0.25 -0.26 0.01 -0.39 -0.1 -0.26 0.01 1.03 1.13 0.81 0.85 0.03 -0.19 0.7 -5.72 -4.72 -3.6 0.5 0.63 -2.07 -1.0 -1.26 -0.74 0.05 -0.02 -0.36 -0.03
-0.09 0.42 0.51 0.46 0.06 0.3 0.27 -0.08 -0.02 0.25 0.08 0.11 -0.45 0.49 1.62 0.11 0.49 0.18 -0.44 -2.16 -1.36 -3.22 0.42 -0.09 -0.88 -0.51 -1.5 -0.92 0.26 0.21 -0.83 -0.81
-0.24 -0.79 -0.53 0.07 0.02 -0.17 -0.31 0.33 0.18 0.36 -0.12 -0.35 0.33 1.95 1.1 0.3 -1.11 -1.87 -0.52 -2.9 -6.01 -1.31 0.97 1.61 -0.8 -1.78 -1.0 -1.41 -0.53 -0.28 0.1 -0.13
-0.21 -0.34 0.01 0.03 0.07 0.41 0.33 0.18 0.5 0.15 -0.06 -0.38 -0.57 0.94 1.23 0.61 0.29 0.19 0.35 -4.44 - -5.64 0.36 0.32 -2.95 -0.85 -0.09 -0.13 0.16 0.15 -0.24 -0.05
-0.46 0.08 -0.53 -0.27 -0.29 -0.04 -0.01 -0.08 0.4 0.31 0.0 -0.02 0.65 0.93 0.94 0.86 -0.04 0.2 0.48 -3.53 -2.77 -3.79 0.34 0.54 -0.85 -0.59 -1.45 -1.41 0.45 0.29 -0.14 0.25
0.11 0.4 0.21 0.13 0.18 0.36 0.0 -0.7 -0.56 -0.63 -0.5 -0.69 0.03 1.31 1.51 1.03 0.16 0.63 0.16 -1.74 -3.6 -3.04 0.46 0.38 -4.55 -1.28 -0.44 -0.33 -0.08 0.29 -0.77 -0.88
-0.69 -0.28 -0.38 -0.03 -0.19 -0.18 -0.32 -0.94 -0.49 -0.72 -0.43 -0.37 0.62 2.14 2.13 0.55 -0.85 -1.05 0.43 -1.79 -4.02 -0.29 -0.36 0.34 -2.33 -0.11 -0.89 -0.92 -0.78 -0.36 -0.13 0.02
0.12 0.13 -0.09 -0.1 -0.0 0.23 0.09 -0.39 -0.01 -0.16 -0.17 -0.31 0.72 0.26 0.3 0.8 -0.14 -0.12 0.39 -1.79 -1.73 -1.09 0.87 1.03 -0.18 -0.69 -0.42 -0.17 -0.19 0.08 -0.54 -0.42
-0.11 -0.29 -0.24 -0.22 -0.22 -0.1 -0.11 0.19 0.21 0.23 0.04 0.08 1.1 0.87 0.83 0.91 -0.2 -0.59 0.09 -2.27 -2.95 -2.0 0.25 0.34 -2.15 -0.04 -0.0 -0.11 -0.02 0.12 -0.04 -0.26
0.44 0.23 0.03 -0.05 0.06 0.0 -0.11 -0.01 -0.11 -0.01 -0.07 0.01 1.26 0.84 0.22 1.3 -0.99 -0.47 0.47 - - -0.34 0.1 0.31 -3.1 -0.03 -0.47 -0.45 -0.41 -0.37 -0.02 0.05
Smo96262 (REP)
 0.04 -0.15 -0.38 0.18 -0.4 -0.04 -0.05 -0.3 0.11 0.06 -0.19 -0.13 0.63 1.0 0.95 0.85 0.12 -0.06 0.68 - -2.5 -5.07 0.5 0.45 -5.2 -0.66 -0.45 -0.63 0.21 0.27 0.31 0.27
Smo99252 (GMD1)
 -0.22 -0.12 -0.17 -0.13 -0.16 -0.14 -0.26 -0.4 -0.4 -0.21 -0.28 -0.48 0.83 1.92 1.89 1.3 -0.01 -0.39 0.27 -3.25 -5.11 -4.51 -0.0 -0.01 -2.09 -0.42 -1.12 -0.82 -0.27 -0.11 -0.62 -0.73

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.