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Heatmap: Cluster_10 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
0.97 0.54 -1.14 -2.95
1.01 -0.33 -0.0 -2.39
1.03 0.77 -2.12 -5.68
0.43 0.08 -0.08 -0.62
1.1 -0.53 0.2 -6.15
Pnu_g00787 (OVA5)
 0.53 0.1 -0.41 -0.45
Pnu_g00827 (DUR3)
 0.93 0.01 -0.57 -1.3
0.35 0.08 -0.17 -0.35
0.39 -0.01 -0.09 -0.4
Pnu_g01670 (GDH1)
 0.65 -0.07 0.11 -1.34
Pnu_g01751 (EMB2083)
 0.28 0.06 -0.13 -0.27
0.63 -0.0 -0.08 -0.99
0.49 0.04 -0.09 -0.67
Pnu_g02089 (ALN)
 0.43 0.05 -0.13 -0.52
Pnu_g02470 (SULTR1;3)
 0.6 -0.16 -0.09 -0.62
0.62 0.06 -0.44 -0.55
0.77 0.34 -0.66 -1.32
0.95 0.02 -0.41 -1.74
0.21 0.05 -0.06 -0.24
1.36 -0.09 -1.4 -3.11
1.14 -0.13 -0.63 -2.07
1.14 0.26 -0.98 -3.3
1.12 0.8 -4.27 -4.83
0.43 0.05 -0.02 -0.66
1.1 0.66 -2.01 -5.28
0.87 0.45 -0.98 -1.74
1.41 -0.39 -0.94 -4.23
1.01 0.16 -1.21 -1.18
Pnu_g05645 (SPS3F)
 0.99 0.16 -0.72 -1.78
Pnu_g05725 (SCO2)
 0.39 0.08 -0.12 -0.49
0.77 0.03 -0.31 -1.07
0.61 0.16 -0.62 -0.5
0.72 0.32 -0.82 -0.9
0.87 0.18 -0.81 -1.1
Pnu_g06079 (TPK2)
 0.62 0.08 -0.31 -0.74
0.19 0.05 -0.02 -0.24
Pnu_g06237 (DCP1)
 0.38 0.07 -0.09 -0.49
Pnu_g06411 (SVR7)
 0.57 0.11 -0.45 -0.51
Pnu_g06447 (SEP1)
 0.55 0.09 -0.31 -0.58
Pnu_g06529 (SPPA)
 0.56 0.03 -0.18 -0.67
Pnu_g06673 (RPA32B)
 0.58 0.1 -0.2 -0.82
Pnu_g06676 (SECA2)
 0.38 0.08 -0.12 -0.46
0.67 0.06 -0.43 -0.66
Pnu_g06776 (RSH3)
 0.79 0.12 -0.57 -0.97
Pnu_g06900 (LHCA5)
 0.84 0.21 -0.68 -1.23
0.49 0.06 -0.33 -0.41
Pnu_g07288 (GUS3)
 0.98 0.19 -1.02 -1.37
0.81 0.29 -0.76 -1.19
Pnu_g07687 (ATGSTF13)
 1.0 0.67 -1.5 -4.3
Pnu_g08141 (MRP10)
 0.65 0.19 -0.39 -0.92
0.75 0.12 -0.51 -0.92
1.0 0.12 -0.22 -3.97
0.78 0.09 -0.68 -0.76
Pnu_g08528 (PI3K)
 0.34 -0.05 0.01 -0.39
Pnu_g08552 (HT1)
 0.67 -0.07 0.05 -1.28
0.76 0.21 -0.41 -1.3
Pnu_g08773 (MTP11)
 0.3 0.1 -0.16 -0.32
Pnu_g08892 (YLMG1-2)
 0.48 0.11 -0.31 -0.48
1.06 0.12 -0.47 -3.22
Pnu_g09405 (EDD)
 0.55 0.04 -0.3 -0.54
0.47 0.05 -0.25 -0.44
Pnu_g09500 (CAT2)
 0.68 -0.05 -0.26 -0.76
0.5 -0.09 -0.07 -0.53
0.33 0.1 -0.09 -0.45
Pnu_g09588 (SQD2)
 0.92 0.17 -0.78 -1.33
0.58 0.14 -0.12 -1.05
0.51 0.2 -0.29 -0.73
0.47 0.02 0.0 -0.74
Pnu_g10081 (ATL43)
 0.88 0.04 -0.5 -1.25
0.91 0.2 -0.65 -1.56
0.54 0.07 -0.29 -0.55
1.3 -0.34 -0.7 -2.94
0.48 -0.02 -0.01 -0.69
1.25 0.02 -0.78 -5.24
Pnu_g10940 (FEI1)
 0.9 0.24 -1.06 -1.09
0.66 -0.01 -0.21 -0.84
0.6 0.11 -0.18 -0.91
0.34 -0.03 -0.01 -0.38
0.31 0.04 -0.08 -0.35
1.04 0.08 -0.74 -1.76
Pnu_g11638 (DHAR3)
 0.5 0.07 -0.23 -0.56
0.46 -0.06 -0.03 -0.55
Pnu_g11910 (RNR1)
 0.36 0.02 -0.02 -0.48
0.61 0.06 -0.17 -0.87
0.47 0.21 -0.43 -0.48
0.27 0.01 -0.08 -0.24
0.54 0.1 -0.46 -0.41
0.79 0.12 -0.57 -0.98
0.75 0.02 -0.21 -1.17
Pnu_g12721 (CCD1)
 0.6 0.25 -0.56 -0.69
Pnu_g12805 (PRPL11)
 1.03 -0.02 -0.82 -1.29
0.92 0.04 -0.33 -1.8
Pnu_g12995 (PIP)
 0.66 0.05 -0.22 -0.91
Pnu_g13193 (STN1)
 0.55 0.01 -0.07 -0.81
0.54 0.04 -0.36 -0.43
0.91 -0.06 -0.43 -1.28
0.76 0.13 -0.54 -0.92
0.24 0.08 -0.12 -0.25
0.48 0.03 -0.05 -0.67
Pnu_g13713 (CSP41A)
 0.97 0.37 -1.23 -1.64
0.59 0.18 -0.5 -0.62
0.7 0.14 -0.55 -0.76
0.98 0.7 -3.69 -1.66
Pnu_g15322 (LACS4)
 0.6 -0.01 -0.22 -0.66
0.89 0.08 -0.46 -1.46
0.34 0.09 -0.19 -0.33
0.8 -0.12 -0.14 -1.2
1.31 -0.06 -1.38 -2.49
0.41 0.02 0.0 -0.6
Pnu_g17203 (YAP169)
 1.01 0.15 -0.65 -2.11
0.6 0.18 -0.57 -0.56
Pnu_g17583 (FAAH)
 0.93 -0.01 -0.38 -1.58
0.55 0.26 -0.59 -0.56
0.72 -0.04 -0.32 -0.8
0.79 -0.02 -0.35 -1.03
Pnu_g18503 (NF-YA7)
 0.78 0.08 -0.35 -1.18
Pnu_g18511 (UGP3)
 0.57 -0.15 0.07 -0.83
0.81 0.22 -0.84 -0.95
0.54 0.11 -0.22 -0.71
0.35 0.11 -0.1 -0.48
0.74 0.07 -0.09 -1.58
0.95 0.15 -0.86 -1.31
Pnu_g20181 (GNL)
 0.55 0.08 -0.15 -0.78
0.63 0.08 -0.29 -0.79
0.67 0.09 -0.41 -0.74
Pnu_g21007 (CSD2)
 0.77 0.15 -0.34 -1.35
0.83 0.15 -0.71 -1.01
1.0 -0.17 -0.67 -1.08
Pnu_g21389 (ENH1)
 0.83 0.08 -0.45 -1.2
0.57 0.09 -0.37 -0.56
0.66 0.18 -0.7 -0.56
0.83 0.16 -0.75 -0.97
0.37 0.14 -0.19 -0.47
Pnu_g24923 (UBC37)
 0.64 0.03 -0.21 -0.85
0.56 0.06 -0.18 -0.74
0.96 -0.04 -0.7 -1.11
0.56 0.08 -0.22 -0.71
Pnu_g25424 (DUF3)
 0.49 0.01 -0.06 -0.67
0.49 0.1 -0.21 -0.6
Pnu_g26085 (CAT2)
 0.59 0.08 -0.28 -0.7
0.41 0.1 -0.06 -0.64
0.55 0.01 -0.33 -0.44
0.72 -0.09 -0.09 -1.08
Pnu_g26834 (PTAC2)
 0.42 0.13 -0.21 -0.5
Pnu_g26847 (LIL3:1)
 0.61 0.12 -0.29 -0.82
0.8 -0.12 -0.17 -1.14
Pnu_g27449 (LIP1)
 0.64 0.14 -0.38 -0.81
Pnu_g27548 (PEX11D)
 0.42 0.05 -0.11 -0.51
0.94 -0.21 -0.38 -1.15
1.33 -0.01 -1.38 -3.23
Pnu_g28852 (SSR16)
 0.8 0.13 -0.7 -0.87
1.05 0.57 -1.76 -2.84
0.86 -0.06 -0.5 -0.95
0.9 0.9 -2.63 -3.27
0.58 0.11 -0.36 -0.62
0.63 -0.0 -0.18 -0.79
0.62 0.33 -0.7 -0.75
0.45 0.1 -0.22 -0.5
0.5 0.11 -0.39 -0.41
0.6 0.13 -0.27 -0.84
0.65 0.23 -0.57 -0.77
Pnu_g32942 (XRCC3)
 0.4 0.07 -0.23 -0.35
1.1 0.74 -2.64 -5.23
Pnu_g32980 (PKP1)
 0.38 0.03 -0.09 -0.43
Pnu_g33324 (EMB2247)
 0.43 0.1 -0.2 -0.5
1.29 0.1 -1.18 -4.56
Pnu_g33541 (DYP)
 1.34 -0.2 -0.86 -4.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.