Heatmap: Cluster_36 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial Stem	Mature Aerial Stem	Syangia	Rhizome
Pnu_g00039	-1.65	-0.19	-2.35	1.38
Pnu_g01499	-1.62	-0.85	-2.9	1.58
Pnu_g01514	-0.66	-0.17	-1.25	1.04
Pnu_g01911	-2.89	-0.86	-2.37	1.64
Pnu_g02111 (AFB2)	-0.65	-0.09	-1.09	0.97
Pnu_g02829	-0.69	-0.12	-0.78	0.91
Pnu_g04554	-	-0.68	-1.84	1.63
Pnu_g04603	-2.88	-1.44	-0.58	1.5
Pnu_g04794	-	-0.72	-	1.76
Pnu_g05223	-5.64	-0.67	-2.23	1.65
Pnu_g05346	-	-1.89	-5.06	1.89
Pnu_g05585	-1.0	0.27	-1.27	0.91
Pnu_g05589	-	-3.12	-	1.96
Pnu_g05803	-	-7.62	-	2.0
Pnu_g05879	-4.09	-0.06	-3.05	1.52
Pnu_g06463 (RCD3)	-0.48	-0.2	-0.74	0.86
Pnu_g06494	-0.73	0.13	-0.62	0.73
Pnu_g06967	-2.22	-0.58	-	1.64
Pnu_g06968 (NLM4)	-2.5	-0.4	-8.89	1.62
Pnu_g07683	-4.73	-1.43	-1.82	1.73
Pnu_g09430 (HMA2)	-0.56	0.12	-0.56	0.64
Pnu_g09595	-1.9	-0.45	-1.44	1.4
Pnu_g10317 (AMT1;2)	-2.33	-1.11	-7.49	1.74
Pnu_g10355 (ISPF)	-0.46	0.09	-0.93	0.75
Pnu_g10460	-2.45	-1.99	-3.02	1.78
Pnu_g11319	-4.9	-1.75	-	1.88
Pnu_g11782	-0.44	0.01	-0.34	0.55
Pnu_g12884	-2.23	0.03	-1.77	1.3
Pnu_g12946 (PFK3)	-0.74	0.0	-1.12	0.96
Pnu_g13080 (NIK2)	-1.29	0.19	-1.89	1.12
Pnu_g13345	-3.16	-0.22	-1.78	1.45
Pnu_g14314	-	-2.95	-	1.95
Pnu_g14326	-	-	-	2.0
Pnu_g14391	-	-	-	2.0
Pnu_g14397	-	-5.51	-	1.99
Pnu_g14418 (KIN10)	-	-	-	2.0
Pnu_g14425	-	-	-4.51	1.98
Pnu_g14426 (MYB50)	-3.33	-0.89	-1.27	1.56
Pnu_g14575	-	-5.7	-	1.99
Pnu_g14719	-	-	-	2.0
Pnu_g14721	-5.6	-2.75	-4.58	1.92
Pnu_g14852	-	-	-	2.0
Pnu_g15011	-	-	-	2.0
Pnu_g15037	-	-	-	2.0
Pnu_g15116	-	-	-	2.0
Pnu_g15201 (LHCA3)	-2.77	-1.68	-	1.82
Pnu_g15206	-3.85	-2.73	-	1.92
Pnu_g15209	-	-4.78	-	1.99
Pnu_g15224	-1.64	-3.55	-	1.85
Pnu_g15260 (XBCP3)	-4.58	-1.4	-	1.84
Pnu_g15332 (LOS1)	-5.11	-0.27	-3.71	1.62
Pnu_g15414	-1.36	-1.11	-0.5	1.29
Pnu_g15419	-	-	-	2.0
Pnu_g15482	-	-	-5.32	1.99
Pnu_g15500	-3.02	-1.52	-2.36	1.74
Pnu_g15511	-	-	-	2.0
Pnu_g15674	-3.78	-3.08	-0.86	1.7
Pnu_g15958	-2.63	-0.23	-	1.58
Pnu_g15998	-0.49	-0.46	-0.87	1.01
Pnu_g16224	-	-	-	2.0
Pnu_g16238	-	-	-	2.0
Pnu_g16257 (BE3)	-	-6.61	-6.65	1.99
Pnu_g16259	-	-5.96	-	1.99
Pnu_g16385	-	-	-	2.0
Pnu_g16483	-	-3.94	-	1.98
Pnu_g16524	-	-	-	2.0
Pnu_g16641	-	-	-	2.0
Pnu_g16660 (OFP4)	-1.16	-1.19	-3.32	1.59
Pnu_g16799	-4.78	-3.95	-	1.96
Pnu_g16800	-5.05	-3.99	-7.09	1.96
Pnu_g16902	-0.42	0.1	-0.64	0.62
Pnu_g17172	-	-2.24	-	1.92
Pnu_g17208	-4.65	-1.99	-0.6	1.61
Pnu_g17412	-	-4.14	-	1.98
Pnu_g17503	-2.8	-0.18	-2.14	1.46
Pnu_g17672	-2.32	-1.21	-	1.75
Pnu_g18045	-	-4.69	-4.75	1.97
Pnu_g18064	-	-2.57	-	1.94
Pnu_g18247	-2.46	-4.2	-2.12	1.82
Pnu_g18365	-	-	-2.61	1.94
Pnu_g18371	-	-	-	2.0
Pnu_g18583	-1.22	-0.04	-0.53	0.93
Pnu_g18683	-3.56	-0.68	-5.66	1.71
Pnu_g18792	-	-1.86	-	1.9
Pnu_g18802	-	-	-	2.0
Pnu_g19249	-	-7.37	-9.1	2.0
Pnu_g19380	-	-	-	2.0
Pnu_g19436	-	-1.79	-	1.89
Pnu_g19753	-2.46	-3.37	-	1.9
Pnu_g19879 (OMT1)	-3.69	-3.79	-3.77	1.92
Pnu_g20058 (OMT1)	-4.06	-2.11	-3.65	1.86
Pnu_g20249	-5.85	-3.04	-3.18	1.91
Pnu_g20339	-2.16	-0.16	-1.99	1.4
Pnu_g20464 (CHX18)	-7.0	-4.42	-	1.98
Pnu_g20467 (PAT1)	-0.66	0.15	-0.56	0.66
Pnu_g20538	-0.48	0.09	-0.35	0.52
Pnu_g21016	-	-	-	2.0
Pnu_g21020	-	-	-	2.0
Pnu_g23957 (PERK1)	-1.4	-0.44	-1.51	1.34
Pnu_g24078	-0.31	0.03	-0.44	0.52
Pnu_g24493 (4CL3)	-2.02	-0.81	-1.11	1.44
Pnu_g25761 (JAI3)	-1.17	0.07	-1.21	1.05
Pnu_g26467	-0.48	0.13	-0.61	0.62
Pnu_g33928	-2.91	-0.72	-	1.7
Pnu_g33934	-0.67	-0.05	-0.51	0.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.