Heatmap: Cluster_216 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d003311 (GRMZM2G121700)
-2.0 -4.11 -4.34 -2.45 -1.77 -2.39 -2.28 -3.36 -2.2 -2.46 -3.16 -1.23 -3.07 -3.25 0.6 -3.21 -4.91 -0.25 -2.63 0.77 -2.79 -3.44 -1.31 -3.46 -3.58 -0.58 -0.96 -0.79 4.53 -5.27 -3.13 1.62 -2.32 -0.69 -4.41 -2.29 -3.11
- - -8.1 -5.64 -5.23 -5.97 - - - - - -9.11 -7.74 0.88 -10.07 -3.79 -9.77 -1.3 -10.9 -6.81 -7.6 -3.92 - - -4.59 - - -1.28 4.79 - -2.02 2.41 -3.24 -0.42 - -8.77 -9.4
-4.67 -5.31 -4.9 -3.84 -1.9 -3.9 -3.79 -2.31 -3.92 -4.8 -3.07 -2.97 -2.6 1.48 -2.65 -1.71 -3.34 -1.38 -2.23 -4.79 0.41 -0.75 0.63 -0.49 -1.65 -2.89 -3.37 -1.23 4.31 -0.16 -5.12 2.3 -4.77 -1.17 -3.1 -2.81 -2.94
Zm00001d005421 (GRMZM2G092125)
0.47 -3.66 -1.08 -1.47 -0.49 -0.32 -0.79 -0.66 -1.83 -2.6 -2.05 -1.65 -1.58 -1.48 -1.11 -2.09 -1.81 -1.18 -1.7 -10.08 -0.79 -1.61 -0.93 -1.7 -1.42 -1.27 -2.35 -1.47 4.36 -1.46 -4.06 0.69 -2.24 -2.02 -2.21 -1.13 0.76
-2.23 -3.7 -1.01 1.15 0.15 -2.27 -2.13 -3.18 -2.14 -3.1 -1.84 -0.72 -1.67 0.83 -1.07 -1.27 -2.81 -0.89 -1.32 -5.9 -1.98 -1.59 0.72 -2.15 -1.28 -0.01 -1.62 -0.22 3.95 -1.28 -3.0 1.94 -1.26 -0.69 -2.19 -0.99 -1.59
Zm00001d007831 (GRMZM2G176375)
-1.93 -5.7 -3.89 0.34 0.3 -6.32 -5.86 -6.79 -0.86 -2.72 -6.69 -1.68 -6.56 -1.87 -0.72 -4.13 -10.91 -2.92 -2.84 -10.3 -5.42 -4.61 -3.59 -7.04 -3.61 -3.98 -4.11 -2.47 4.68 - -3.63 2.08 -2.78 -2.38 -2.44 -1.28 -1.45
Zm00001d010969 (GRMZM2G086766)
-5.34 - 2.07 -0.49 0.54 -0.52 -1.83 -1.31 -1.34 -2.18 -0.8 -0.87 -2.98 -0.7 -0.51 -0.26 -1.57 -1.26 -2.3 -10.99 -0.75 -1.8 -2.06 -2.8 -1.15 -1.5 -3.45 -1.14 4.07 -3.55 -4.35 1.54 -2.99 -1.36 -1.99 -1.02 -0.88
Zm00001d011879 (GRMZM2G129019)
-0.85 -3.49 1.16 -2.32 -0.06 -1.22 -2.57 -1.76 -0.18 -1.93 -1.21 -0.3 -0.51 -1.95 0.43 0.36 -2.12 -1.04 -3.82 -9.71 -1.45 -1.61 -0.05 -2.89 0.11 -1.84 -0.29 -1.04 3.89 -4.18 -2.7 1.18 -3.78 -0.93 0.64 -0.43 -0.62
Zm00001d012824 (GRMZM2G384338)
-2.13 -2.69 -2.91 0.34 -1.48 -3.37 -3.15 -2.78 -2.49 -2.59 -4.75 -1.96 -2.19 -1.31 -1.38 -1.4 -3.82 -0.15 -0.26 -3.71 -0.62 -2.97 -1.29 -0.33 -1.74 -2.74 -2.02 0.48 4.54 -1.09 -0.74 -0.64 -2.33 -2.33 -0.95 -1.7 -1.99
Zm00001d014702 (GRMZM2G076437)
-1.15 -1.71 -0.94 -0.98 -0.67 -1.64 -2.04 -1.14 -2.28 -2.17 -1.7 -0.6 -0.93 0.06 -0.38 -0.59 -0.33 0.1 -0.48 -0.9 0.26 -1.27 -1.26 -0.36 -0.75 -0.56 -1.31 -0.27 3.53 0.95 -1.24 1.94 -0.69 -0.32 -0.37 -0.84 -2.15
Zm00001d015637 (GRMZM2G103937)
-4.91 -4.57 -7.95 -5.61 -4.71 -6.84 -10.3 -5.88 -5.63 -8.11 - -4.03 -6.08 -4.56 -1.03 -3.89 -5.67 -1.77 -1.85 -5.92 -4.52 -4.42 -4.26 -4.68 -2.39 1.37 -2.12 -0.44 4.78 -2.97 -1.96 0.71 -3.26 -0.53 -0.11 -1.84 -3.03
Zm00001d016565 (GRMZM2G015333)
- - -6.85 - -3.05 -7.31 - - -4.85 -4.59 - -3.75 - 1.95 -5.52 -3.09 - 1.44 -5.7 -6.94 -7.03 -2.71 - -7.1 -5.22 - -6.58 -0.22 4.76 - -5.81 - -0.12 -0.68 -5.37 -3.96 -3.83
Zm00001d016696 (GRMZM2G115504)
0.07 -1.65 -3.82 0.6 0.09 -2.34 -2.17 -1.7 -2.55 -3.09 -4.13 -3.03 0.07 -4.6 -1.68 -1.59 -3.53 0.79 -0.35 0.46 -6.5 -3.09 -2.66 -1.48 -3.11 -0.9 0.23 -1.58 4.4 - -1.44 0.1 -3.43 -2.56 -2.82 -2.44 -3.34
-5.77 - -3.01 - -0.44 -2.68 -5.51 -0.88 - -4.26 -1.29 -1.56 - 0.09 -1.37 -0.67 -1.35 -1.79 -4.06 - -1.52 -1.66 2.94 0.09 -0.21 - - -1.1 4.27 - -4.34 -2.75 -3.98 -3.22 -0.95 -1.06 -1.3
-2.43 -1.93 -1.3 0.32 -1.1 -0.87 0.06 -0.52 -2.62 -2.18 -0.64 -0.66 -5.54 -1.56 -1.13 -1.23 -1.12 -1.04 -0.1 -3.73 -0.75 -0.77 -1.29 -1.91 -0.9 -0.54 -1.45 -0.41 3.61 0.93 0.33 2.23 -1.36 -0.37 -0.66 -0.69 -0.67
Zm00001d017968 (GRMZM2G059496)
-5.96 -7.67 -1.99 -6.31 -1.93 -4.4 -5.45 -1.98 -7.18 -5.33 -5.73 -3.21 -2.71 -6.37 -2.81 -2.51 -3.44 -2.9 -2.25 - -4.81 -1.43 -2.48 -2.63 -1.85 -4.21 -4.89 -2.04 4.82 -2.79 -4.6 2.22 -4.43 -1.9 -4.99 -2.71 -4.33
Zm00001d018118 (GRMZM2G045927)
-2.32 - 2.84 -3.22 0.79 -3.38 -4.17 - -2.63 -5.37 -3.02 -5.88 - -1.12 -4.01 -2.48 - -5.71 -2.27 -8.22 -3.93 - - -5.87 -4.28 - -4.35 -0.86 4.52 - -2.82 0.42 -2.77 -0.26 -2.73 -3.75 -4.4
Zm00001d018451 (GRMZM5G808853)
-0.93 -3.34 0.03 0.36 0.08 -4.39 - -2.7 -2.11 -2.85 -5.7 -2.68 -0.67 -1.1 -0.32 -1.31 -1.32 -0.92 -1.38 -1.2 0.23 -0.78 - -0.98 -0.05 -2.19 -3.56 -2.24 3.92 -4.65 -0.85 2.64 -2.65 -2.74 -0.08 -0.95 -0.44
Zm00001d018938 (GRMZM2G132568)
-0.88 -3.02 -0.3 -0.73 -0.13 -1.43 -1.16 -1.28 -0.82 -0.94 -2.09 -0.42 0.18 -0.2 -0.48 -0.02 -0.52 0.11 1.45 -5.5 0.01 0.06 -0.72 -0.12 -0.43 -0.03 -0.97 -0.03 3.19 1.21 -1.91 -0.31 -1.36 -0.15 -1.18 -0.5 -0.41
Zm00001d019078 (GRMZM2G028129)
-2.38 -2.97 -1.16 -1.12 -0.16 -3.69 -5.0 -2.9 -2.81 -3.29 -1.36 -1.57 - -6.47 -2.06 -4.68 -11.25 -4.36 -4.56 -13.26 -9.79 -8.91 -0.99 -9.65 -4.41 -7.36 -0.46 -1.14 4.64 -4.85 -6.88 2.21 -3.19 -0.71 -2.67 -0.89 -1.04
Zm00001d019306 (GRMZM2G003789)
-3.93 -5.5 -3.62 -2.96 -2.06 -4.72 -4.93 -3.44 -5.86 -7.05 -3.61 -2.43 -4.26 -3.44 -3.58 -2.39 -2.52 0.23 -3.35 -3.15 -1.4 -1.31 -2.82 -2.38 -0.73 -1.76 -1.08 0.84 4.59 -1.88 -1.03 1.15 0.03 0.41 -3.4 -3.22 -2.79
Zm00001d022238 (GRMZM2G158885)
0.09 -0.68 -0.55 -0.15 -0.09 -1.69 -2.2 -1.48 -2.11 -2.14 -1.26 -0.82 -0.33 0.36 -0.93 -0.23 -1.1 -0.21 1.03 -3.13 -0.5 -0.98 0.14 -0.71 -1.13 -0.38 -0.26 0.33 3.44 -0.08 -0.81 1.36 -0.8 -0.87 -1.31 -1.25 -1.37
Zm00001d022574 (GRMZM2G516421)
-1.26 -4.09 -0.39 0.29 -0.13 -3.56 -4.73 -7.16 -1.64 -3.2 -5.09 -2.48 -3.05 0.37 -0.8 -0.82 -3.7 -2.78 -3.33 -2.58 -3.14 -3.15 -1.93 -4.04 -4.62 -1.98 -4.42 0.31 4.32 -1.54 -7.37 2.07 -1.03 0.2 -0.01 -1.41 -2.93
Zm00001d026255 (GRMZM2G094360)
- - -9.91 - -8.39 -9.22 -9.23 -10.03 -7.81 -8.59 -7.28 -5.41 - -7.07 -8.52 -9.41 -8.2 -2.74 -1.86 - -6.92 -4.18 -1.69 -9.01 -4.17 - -6.42 -1.44 5.0 -4.17 -9.26 1.6 -3.88 -0.72 -10.79 -8.55 -9.01
Zm00001d028797 (GRMZM5G814718)
-1.62 -8.72 -0.27 1.08 1.11 - -9.3 - -6.11 -8.0 - -4.51 -4.23 0.26 -4.63 -5.83 - -2.48 -3.67 -9.15 -9.17 - - - -3.86 - -6.82 0.86 4.61 -1.37 - -0.81 -3.5 0.97 -2.12 -2.47 -2.73
-9.17 -6.78 -2.31 -1.83 -1.7 -2.4 -4.63 -0.8 -2.52 -2.58 - -3.64 -1.66 -4.85 -2.58 -1.41 -1.98 -1.27 -3.29 - 1.01 -0.72 - 1.52 -0.01 - -5.23 -1.47 4.53 -0.55 -1.33 0.53 -4.43 -2.51 -1.19 -2.77 -3.78
- - - - - - - - -1.44 -2.18 - -0.45 - - -0.51 -2.56 - -1.21 -2.33 - -0.92 -2.52 - -1.26 -2.75 -0.99 -2.71 -2.44 4.85 0.51 -0.47 - -4.44 -3.68 -4.36 -0.78 -2.0
Zm00001d030830 (GRMZM2G104494)
-0.64 -5.85 -6.04 -0.01 -0.07 -4.42 -3.56 -1.36 -0.13 -1.41 - -0.87 -3.68 -4.75 -1.85 -4.98 - 1.64 -1.2 -5.45 - - -0.05 -5.16 -2.78 - -1.73 -1.81 4.5 - -3.33 1.47 -2.11 -2.68 -9.0 -1.28 -5.96
Zm00001d031647 (GRMZM2G368827)
- - - - -11.62 - - -4.09 - - - -6.52 -3.81 -2.98 -4.36 -4.66 -2.65 -1.82 -1.48 -8.34 -2.34 -3.77 - -5.8 -5.15 -2.03 -5.97 -1.17 4.96 -6.49 - 1.58 -2.64 -1.3 -4.45 -4.62 -5.33
Zm00001d035823 (GRMZM2G036525)
- - -4.3 - -5.38 -4.59 - - - - - -6.3 - -6.82 -10.8 -4.0 -4.59 - -4.84 -5.96 -5.75 -5.79 - -8.94 -7.53 - -3.31 -4.92 5.08 -3.77 - 1.39 -6.4 - -5.48 -6.52 -7.4
Zm00001d038333 (GRMZM2G077498)
0.55 -3.16 -3.75 -0.51 -0.78 - - -3.14 -4.0 -5.75 -3.55 -3.15 -0.93 -3.59 -1.73 -2.39 -1.05 0.89 -1.93 -5.6 -1.61 -0.89 - -2.56 -2.13 0.62 -1.99 0.57 4.38 -0.02 -3.36 0.64 -1.74 0.05 -3.03 -1.74 -2.71
Zm00001d039135 (GRMZM2G321778)
-5.2 -6.62 0.29 -0.11 -0.54 -1.17 -2.2 -0.41 -1.0 -2.62 -0.93 0.51 -1.28 -1.29 0.09 -0.5 -1.58 -1.21 -5.69 - -1.51 -0.67 -2.19 -1.53 -1.4 - -2.58 -1.37 4.34 - -7.7 1.14 -3.42 -1.5 -1.52 -0.87 -0.98
Zm00001d039146 (GRMZM2G159016)
-3.59 -3.36 -3.01 -0.27 -0.22 -1.1 -2.26 -2.21 -1.39 -1.24 -2.08 -0.79 -3.4 -1.1 -0.49 -1.75 -1.31 -0.89 0.88 -5.27 -0.86 -2.23 1.1 0.48 -1.79 -1.55 -1.77 0.14 3.83 -0.33 -3.09 2.1 -1.21 -1.03 -1.15 -1.12 -0.94
Zm00001d040110 (GRMZM2G375249)
0.29 -5.74 -3.5 -3.68 -1.93 -8.72 -9.53 -5.86 -6.64 -7.47 - -6.05 -3.05 -0.65 -3.16 -1.79 -5.63 -1.67 -3.49 - -4.2 -4.37 -4.13 -6.09 -3.15 -4.07 1.22 0.16 4.6 -0.83 0.73 1.02 -4.25 0.09 -2.13 -3.47 -6.22
Zm00001d040111 (GRMZM2G076029)
-3.83 - -1.4 1.43 0.1 0.17 -0.75 -3.26 -0.88 -0.78 -1.83 -0.52 -5.05 -0.54 -0.62 -0.69 -6.8 -0.76 -2.28 -5.42 -3.68 -4.8 -2.83 -6.7 -2.71 1.15 -0.93 -1.03 4.09 -3.4 0.09 0.81 -2.99 -1.36 -2.15 -0.55 -0.02
Zm00001d040211 (GRMZM2G401294)
- - -1.26 -1.31 0.02 -3.22 -4.02 -2.65 -4.19 -4.45 -2.09 -1.65 - - -1.42 -1.22 -3.41 -1.14 -1.7 - -2.18 - - -2.22 -0.51 -1.49 - -0.87 4.75 - -1.74 - -2.96 -1.48 -1.13 -1.91 0.99
Zm00001d040785 (GRMZM2G314075)
-4.19 - - -1.11 0.67 0.06 -2.73 - -3.05 -2.8 0.44 0.73 - -4.38 -2.19 -3.78 -4.16 -2.6 -1.47 -2.3 -5.74 - 1.44 - -1.75 -3.59 - -2.37 4.22 - -4.87 1.52 0.31 -2.36 -5.79 0.45 0.69
Zm00001d040786 (GRMZM2G014797)
-6.24 - -5.51 - -1.04 -4.57 -3.61 -5.51 -4.75 -3.89 -6.21 -1.31 - - -3.04 -6.66 - -5.26 -3.78 -8.66 -10.32 - 3.1 -5.48 -0.67 -7.41 -7.09 -2.76 4.28 - -3.95 2.52 -3.06 -0.97 -6.41 -2.3 -3.88
Zm00001d040787 (GRMZM2G383699)
-6.91 -5.65 -5.51 -4.12 0.14 -1.53 -3.15 -5.47 -4.94 -3.85 -2.17 -0.21 - -1.37 -2.81 -5.0 -7.03 -4.06 -3.18 -3.86 - - 3.2 - -0.46 0.17 -6.77 -1.53 3.77 -5.23 -4.28 2.31 -0.02 -0.11 -7.3 -0.52 -0.7
Zm00001d041769 (GRMZM2G118241)
-4.14 -9.21 0.99 0.06 0.72 -0.04 -1.63 -1.89 1.25 1.09 0.14 -0.4 -7.78 -0.5 0.71 -1.24 - -3.53 -4.01 -10.05 -8.33 -7.27 -1.47 - -3.59 0.57 2.05 -0.81 3.49 -0.96 -3.41 -3.66 -3.99 -0.87 -0.45 0.01 -0.9
Zm00001d041927 (GRMZM2G368151)
-0.48 -2.44 0.16 -1.56 -0.02 -1.75 -1.8 -2.15 0.46 -0.09 -6.05 -1.39 -1.39 0.75 1.28 -0.41 -1.93 -0.17 -3.33 -12.78 -0.83 -0.94 -2.96 -0.19 -1.87 -3.63 0.87 -0.32 3.94 -3.78 -1.29 -0.28 -3.52 -0.6 -2.6 -0.45 -1.92
Zm00001d046422 (GRMZM2G047684)
-3.88 -2.49 -3.78 -0.33 -0.89 -5.43 -5.75 -4.4 -7.03 -7.94 -1.76 -2.79 -4.68 -3.18 -3.95 -2.27 -2.37 -3.78 -6.21 -10.42 -3.62 -5.61 -0.88 -4.49 -4.2 -5.06 -2.59 -0.53 4.74 - -0.41 1.92 -1.93 -0.72 -4.36 -2.9 -2.37
Zm00001d048690 (GRMZM2G126541)
-8.33 -7.3 -4.28 -1.47 -1.51 -5.6 -8.91 -5.7 -8.67 -8.23 -5.07 -2.57 -7.78 -1.19 -3.3 -3.74 -6.24 -3.36 -4.67 -8.4 -6.26 -6.98 2.91 -4.78 -1.14 -6.09 -1.56 -1.07 4.6 -6.81 -3.78 0.33 -4.35 -2.07 -1.98 -2.92 -2.98
Zm00001d049503 (GRMZM2G472453)
-7.74 -7.7 -1.08 0.54 0.62 -3.62 -3.12 -4.13 0.06 -1.74 -4.66 -1.22 -4.78 -1.72 0.02 -3.55 -4.57 -0.99 -2.39 -10.19 -3.13 -3.79 -2.51 -2.96 -3.51 -2.84 -6.67 -2.69 4.52 -6.81 -4.88 0.72 -2.63 -1.3 0.83 -0.3 -0.85
- - -2.08 -1.35 -1.84 -1.27 - -2.39 - - -1.36 -2.02 - - -3.07 -0.68 -0.84 - -1.98 -9.64 -4.34 -2.01 - - -2.24 -1.34 -1.27 -2.95 4.58 1.82 0.73 0.24 -3.18 -5.98 -1.96 -2.67 -0.06
Zm00001d052776 (GRMZM2G087094)
-0.96 -6.43 -2.69 -1.55 -0.15 0.37 -0.35 -0.64 -0.87 -0.22 -1.43 -0.08 -3.27 0.49 0.19 -1.88 -5.11 -0.77 -3.55 -10.93 -3.85 -5.28 -1.36 -6.24 -3.09 0.4 -0.16 -0.52 4.12 -1.53 -1.53 0.9 -4.67 -0.63 -2.45 0.15 -0.89
Zm00001d053988 (GRMZM2G361611)
-2.37 -1.44 -2.63 0.13 -1.36 0.32 -0.65 -0.28 -0.57 -3.28 -2.59 -0.33 -4.75 -0.63 -1.21 -0.31 -5.7 -1.62 -3.24 -8.94 -1.7 -2.18 -0.01 -2.06 -2.08 -1.49 -0.87 -0.73 4.09 -0.18 1.24 1.2 -2.22 -1.52 -1.58 -1.25 -0.82

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.