Heatmap: Cluster_255 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002462 (GRMZM2G101675)
-0.2 0.16 1.42 -0.34 0.17 -0.9 -1.49 -0.92 -1.34 -0.56 -0.07 -0.82 -1.77 -0.32 -1.05 0.24 0.33 0.22 -0.22 -6.9 -0.73 -0.27 -0.43 0.47 -0.5 -0.1 0.6 -0.12 -1.99 0.74 1.91 -0.69 -0.62 1.9 -0.81 -0.1 -0.97
0.31 0.13 1.63 -7.39 0.18 -1.51 -4.12 -0.18 -0.49 -0.39 -2.22 -0.73 -1.41 -1.29 -0.57 0.05 -0.79 1.07 -1.14 -9.8 0.83 -0.09 -1.17 1.1 0.87 -5.57 0.52 0.43 -1.18 -6.48 1.91 -0.86 -1.18 1.75 0.76 -0.2 -2.7
Zm00001d003191 (GRMZM2G052175)
- - - -0.41 -2.11 -3.46 - - - - -1.76 -1.02 - - -6.04 -1.86 - -0.55 -4.18 -1.82 -7.6 - -1.41 - -5.04 - 2.81 -2.61 - -2.75 4.62 - -3.21 -3.55 -0.37 -3.18 -1.24
Zm00001d003282 (GRMZM2G057637)
- - - - - -7.18 - - - - - -7.15 - - - -14.03 -6.93 - - - - - - -8.26 - - -1.37 1.11 -2.13 - 4.53 -0.18 0.58 3.12 - -6.71 -5.96
Zm00001d005159 (GRMZM2G064163)
0.68 1.24 0.89 -0.47 -0.06 -0.71 -0.89 -0.18 0.11 -0.88 -1.28 -0.43 0.58 -0.66 -0.75 0.35 -0.05 -0.06 1.06 -3.55 -0.63 -0.06 -0.19 0.04 -0.08 -0.19 1.23 -0.76 -0.6 -0.15 0.9 -3.93 -1.99 1.03 0.45 -0.77 -0.78
Zm00001d006364 (GRMZM2G146745)
-4.85 -3.69 -6.65 -1.55 -3.37 - -6.08 - -5.11 -5.41 - -5.99 -6.54 - -4.33 -4.51 -6.09 -5.18 -6.13 -6.89 -6.31 - - -7.5 -3.37 -2.67 0.01 0.58 -1.37 1.17 4.45 0.75 0.85 2.41 -3.7 -5.58 -7.24
-5.68 -9.2 -1.82 -6.25 -3.56 -4.42 -4.06 -1.18 -3.71 -5.18 -6.11 -2.37 - -2.91 -2.03 -1.45 -5.58 -0.24 -0.69 -10.73 -5.23 -3.55 -2.85 -4.61 0.61 -8.78 2.98 0.42 - -6.34 3.97 -4.65 -0.54 2.53 -3.85 -2.74 -4.67
-0.24 -0.01 0.4 -0.32 0.3 -0.98 -1.39 -0.83 -1.49 -1.93 -1.09 -1.01 -0.26 0.5 -0.74 0.29 -0.42 -0.39 -0.83 -6.6 -0.57 -0.78 1.89 -0.15 -0.5 -1.22 -0.47 -0.46 -0.81 0.53 2.57 -1.03 -1.47 0.1 1.27 -0.06 -0.11
-3.1 -2.37 -2.84 -7.6 -0.32 -2.32 -4.95 -4.6 - -8.42 -3.24 0.23 - -2.33 -5.05 -1.18 -7.15 -3.8 -5.91 -5.43 -3.29 -4.81 2.12 -6.57 -0.5 -0.93 -0.73 -1.58 -3.97 - 4.42 -6.26 -1.72 0.06 -1.84 1.58 -0.75
- - - - -6.53 - - - - - - -6.17 -3.57 - - -6.01 -1.37 0.58 0.96 -6.37 1.76 -2.36 - -0.49 0.27 - 0.28 1.65 - - 2.8 0.57 1.5 3.56 -5.93 -5.26 -5.85
Zm00001d013229 (GRMZM2G394688)
- -2.99 -5.87 - -4.33 - - -3.24 - - -4.38 -4.41 - -4.88 -7.13 -5.19 -3.24 -0.99 0.03 -5.73 2.33 -2.67 1.79 -0.24 -0.48 - 0.88 1.31 1.64 -2.66 2.41 1.26 0.49 2.98 -6.74 -3.9 -6.29
Zm00001d014325 (GRMZM2G048549)
-2.55 -1.47 -1.2 -2.42 -0.23 0.35 -0.53 1.06 -0.48 0.75 0.72 0.82 -3.01 -3.79 0.36 0.17 -4.26 -1.28 -2.56 -6.5 -1.38 -1.96 -0.25 -1.88 -0.04 -0.51 0.78 -0.17 -3.53 - 2.67 -0.2 1.14 1.3 -0.85 1.25 -0.1
Zm00001d016098 (GRMZM2G165726)
1.22 -1.26 1.73 -0.44 0.09 -8.98 - -4.37 - - - -4.37 - -6.18 -9.5 -0.34 -5.77 - -6.11 - -7.44 - -3.25 -7.51 -4.0 - 1.76 -0.82 - -4.06 4.42 -2.85 -0.86 0.89 -7.66 -4.49 -5.21
Zm00001d016255 (GRMZM2G105348)
-2.32 -0.74 0.77 2.36 0.36 0.01 0.04 -0.88 -3.34 -2.85 -0.96 -1.25 -4.98 1.25 -2.12 0.58 -4.81 -3.55 -1.32 -5.95 -1.32 -4.61 0.15 -2.01 -2.58 -3.21 0.49 -2.11 -2.66 -5.34 3.34 -2.55 -3.56 -0.11 -3.97 0.93 1.32
Zm00001d017140 (GRMZM2G137399)
- - - - -5.35 -7.21 -3.74 - - - - -6.17 - - -7.72 -12.65 - - -8.69 -6.31 -8.35 -4.66 - - -9.42 - 2.11 0.51 - - 4.33 -1.96 -0.76 3.33 - -4.24 -7.32
Zm00001d019446 (GRMZM2G042692)
-8.64 - - - -8.06 -8.97 - - -7.3 -9.04 - -5.83 -8.0 - -5.06 -7.76 - -7.22 -10.54 -8.51 - - - -10.54 -6.98 - -2.92 -0.27 -3.27 -6.93 4.45 0.13 0.99 3.41 -2.31 -3.1 -6.35
Zm00001d019704 (GRMZM2G407223)
-0.86 -0.08 0.35 -5.85 0.84 -3.46 -8.43 -4.33 -7.03 -5.04 -3.01 -0.8 -6.96 -0.32 -5.61 1.1 -5.82 -5.46 -7.31 -8.46 -4.22 -4.07 -0.39 -6.27 -0.7 -4.2 -1.4 -3.57 - -4.72 4.41 - -4.21 1.79 -4.66 0.4 -1.72
-9.29 -2.84 -8.47 -3.21 -0.89 - -7.04 -6.59 -5.67 -8.15 -5.16 -3.97 -6.11 -0.84 -3.31 -1.4 - -4.8 -5.58 -2.86 -5.74 - - -7.13 -3.06 -1.47 -0.93 -0.96 - -5.14 4.69 - -1.37 2.35 -2.65 0.53 -1.34
Zm00001d021901 (GRMZM2G374971)
-4.09 -4.75 -4.71 -1.65 0.49 -2.07 -3.11 -0.54 -5.24 -5.25 -2.01 -0.25 -3.36 -1.28 -0.63 -1.9 -8.46 -1.88 0.61 -8.68 -4.29 -5.33 1.84 -3.47 -3.2 -0.84 2.35 1.09 -3.03 -5.57 1.22 -1.17 0.28 3.58 -3.81 0.02 -0.08
Zm00001d022303 (GRMZM2G006119)
- - -9.11 - -6.23 -9.52 -2.73 -5.26 -8.47 -10.25 -8.97 -6.32 - -5.85 -6.87 -10.28 - - -8.15 -10.61 -6.49 -8.59 -6.62 -8.69 -7.12 -8.1 0.11 0.27 - -7.15 4.67 - -0.39 3.02 -6.88 -6.88 -4.72
Zm00001d023985 (GRMZM2G350919)
- - - - -4.98 - - - - - - -3.82 - - -3.51 -6.15 - - - - - - - - - - - 2.6 - - -2.93 3.33 2.94 3.66 - - -2.5
Zm00001d024302 (GRMZM2G368861)
-8.96 -12.24 -7.52 - -9.71 - - -9.06 - - - -8.63 - -11.46 -11.18 -6.35 - -12.84 -13.14 -12.84 -12.59 - - -12.93 -6.53 - 0.72 0.8 -6.66 -10.42 4.16 -6.42 1.11 3.75 -13.44 -6.71 -10.34
Zm00001d027258 (GRMZM2G333069)
-4.04 -2.09 -1.96 -3.33 -1.67 -7.0 -7.33 -4.17 -4.37 -4.69 -3.76 -3.44 -2.9 -0.52 -3.37 -0.25 -2.11 -2.96 -2.3 -10.59 -1.1 -4.79 -5.86 -1.4 -2.76 -0.86 -0.59 0.25 -4.2 -2.8 4.51 -0.35 -0.05 2.22 -3.44 -2.0 -2.68
Zm00001d028647 (GRMZM2G172574)
-7.83 - -10.76 - -7.24 - -10.17 - - - - -9.17 - - -11.22 -11.69 - - -11.7 -2.36 -10.99 - - - - - 0.84 -0.94 - - 4.73 -1.86 0.32 2.69 - -9.35 -
Zm00001d029025 (GRMZM2G050077)
-3.65 -5.99 0.72 - 0.38 -3.81 -7.14 -5.62 -0.24 -1.86 -2.86 -0.39 -2.68 -2.97 -0.48 1.58 -1.78 -0.86 -3.33 -9.4 -2.36 -3.72 -2.06 -3.61 0.26 -5.43 -0.38 -1.41 -2.4 -3.0 4.26 - -3.2 0.69 -0.71 0.69 -0.82
Zm00001d029778 (GRMZM2G402564)
-7.91 - -11.74 - -3.65 -8.17 -7.86 -3.98 -7.04 -8.28 -5.83 -3.61 -7.98 -3.95 -4.48 -2.63 -4.82 -6.54 -1.64 -10.11 -2.18 -5.91 -3.8 -1.79 -3.24 -6.04 -2.0 0.2 -2.4 -3.73 4.79 0.06 0.37 1.83 -7.08 -2.8 -3.69
Zm00001d030172 (GRMZM2G179528)
-10.61 -7.81 -5.82 -3.25 -0.12 -0.78 -1.95 -1.45 -2.33 -2.66 1.89 1.03 -7.65 -7.86 -1.13 -4.31 - -3.9 -3.1 -12.04 -8.64 - 2.66 - -2.96 - 2.43 1.22 2.65 - 1.63 -2.49 -0.26 0.89 -2.18 -0.38 -0.79
Zm00001d030262 (GRMZM2G466982)
- - - -0.68 -1.42 -1.67 -0.56 -0.45 - -4.11 -0.21 -0.72 - - -2.35 -1.44 0.2 -5.27 -0.58 - -0.03 -0.29 - - -3.29 0.16 - -0.11 - - 0.45 3.54 -0.99 -3.6 0.37 -2.11 3.49
Zm00001d030464 (GRMZM2G063824)
-0.0 -1.52 -4.11 -1.41 0.12 -7.12 -6.57 -2.22 - - -3.02 -3.98 -1.1 0.11 -3.81 0.02 -5.17 2.3 -3.23 -4.86 0.6 -0.45 - -0.75 0.46 0.13 2.07 -0.1 -0.07 -2.21 2.93 -3.05 -1.47 2.44 -3.36 -2.48 -0.83
- - 0.3 - -3.81 - -0.71 - 3.66 3.52 - -1.1 - - 0.73 -1.86 - -2.02 -2.0 - - - - - - - - -0.37 - - 0.25 - -1.5 1.43 0.05 1.05 -
Zm00001d031228 (GRMZM2G169535)
- -3.8 -6.64 - -5.33 -5.73 -7.69 -3.66 - - -6.28 -1.64 -7.53 - -7.43 -5.28 - -8.91 -10.17 -4.23 - - 1.23 - -5.13 - -0.95 -5.52 - - 4.61 - -3.72 3.11 -6.08 -1.89 -4.66
Zm00001d031785 (GRMZM2G117250)
-1.06 -0.7 -1.15 - 1.26 -1.09 -3.2 - - - -3.08 -1.32 -0.88 1.31 -2.87 -2.66 0.95 - -4.2 -5.87 -2.59 - -3.19 -1.99 -1.77 - 0.0 0.39 - -1.4 4.0 -0.02 -0.18 1.83 -3.04 -0.53 -0.16
Zm00001d032130 (GRMZM2G055143)
- - -4.11 - -3.32 -4.39 -4.04 -3.97 - -7.7 -3.77 -3.46 -4.34 0.54 -5.69 -2.35 -4.9 -1.03 1.61 -5.81 -1.67 -1.27 -1.69 -8.0 -1.63 -0.33 -2.15 -0.2 0.93 2.35 3.71 1.33 -0.76 2.16 -5.31 -4.59 -2.5
Zm00001d033064 (GRMZM2G461548)
- - - - -2.02 - - - - - - -5.49 - - - -3.29 - 0.02 -0.97 - - - - - - - - - - - - 4.74 -1.57 2.95 - - -1.26
- - - - -5.4 - - - - - - 0.67 1.7 - -4.78 0.07 - -0.9 1.34 -1.79 - - - - - - - 1.04 - - 3.81 - 0.79 2.53 - - 2.06
Zm00001d034848 (GRMZM2G159353)
- - -6.44 - -4.56 -0.44 -5.26 1.08 -2.51 -6.94 -2.83 -1.62 - 0.39 -2.01 -3.17 -6.08 - -4.54 1.3 - - 0.72 - -4.04 - -1.11 -0.68 - - 4.15 - -1.37 2.98 -4.57 -3.21 -2.16
Zm00001d036911 (GRMZM2G423378)
-1.68 0.96 -0.57 -1.51 -1.25 -4.0 -5.22 -1.33 -0.1 -0.89 - -3.25 -3.17 -0.86 -2.16 -0.85 -2.69 0.84 -0.12 -2.43 -3.07 -0.02 -4.9 -4.37 -0.74 -4.6 -0.57 -2.27 0.56 - 2.6 - 0.16 3.77 -2.14 0.54 -
Zm00001d037915 (GRMZM5G826767)
-8.63 -7.54 - - -4.44 -9.52 - - - - -6.22 -7.93 - - -9.39 -4.1 -9.14 -7.1 -5.12 -7.79 -4.31 -3.53 - -7.38 -3.33 0.97 -1.44 1.03 - - 4.6 1.5 0.83 1.76 -11.51 -9.31 -
Zm00001d037918 (GRMZM2G055699)
-7.54 -2.99 -2.66 -1.36 -0.79 0.76 0.54 -0.99 -1.99 -1.58 0.94 0.17 -5.62 -2.87 -1.49 -1.71 0.77 -0.76 -1.73 - -3.23 -4.06 2.25 -3.7 -1.54 - 1.82 0.29 2.53 - 0.97 -1.81 -0.05 2.04 -2.56 -0.14 -0.42
Zm00001d038099 (GRMZM2G061143)
- - - - - - - - - - - - - - - - - - - - - - - - - - - 4.02 - - - - 3.47 3.27 - - -
Zm00001d038974 (GRMZM2G085641)
-5.5 -4.84 -2.59 -5.09 -2.02 -0.21 -0.91 -1.83 -1.96 -1.54 0.77 0.41 -7.15 -0.72 -0.42 -1.96 -1.87 1.0 -0.68 -0.12 -1.53 -4.2 0.12 -2.36 -0.47 -1.66 -0.68 -2.52 - 1.3 3.69 -1.87 -2.81 1.78 -1.1 -0.21 0.76
- - - - 4.73 - - - - - - - - - - 3.38 - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - -6.24 - - - -6.27 - - - -1.45 - - - - - - -0.12 2.73 - - -0.89 3.73 2.38 3.32 - - -
Zm00001d043302 (GRMZM2G039166)
-7.39 -8.35 -7.79 - -9.09 -9.75 - - - - -8.74 -6.2 - - - -9.54 -9.54 -8.91 -8.22 -7.33 -9.7 -7.13 - -3.68 -7.22 - -0.47 0.77 - - 4.83 -5.03 0.72 2.11 -12.2 -5.7 -8.05
Zm00001d044078 (GRMZM2G067600)
-1.0 -0.03 1.04 -1.11 0.76 -2.37 -1.71 -0.08 -1.7 -2.28 -2.25 -0.65 - -4.59 -3.81 -1.3 -9.33 -5.04 -8.57 -4.42 -8.52 -7.93 -2.01 -7.0 -3.81 1.29 0.17 -1.3 - -6.82 3.97 -2.54 -1.69 1.83 -6.28 1.54 -0.05
Zm00001d044351 (GRMZM2G019578)
-4.26 - 1.28 -0.98 2.08 -5.42 -3.72 -4.56 - - - -0.9 - - -0.21 -3.4 -2.15 0.15 -0.89 - - -2.13 - -4.58 -2.05 1.55 -3.11 -1.63 1.51 - 3.41 1.19 -0.09 2.0 -0.19 -0.92 -1.81
Zm00001d044352 (GRMZM2G023631)
-4.96 - -3.02 - -0.55 -1.03 -4.57 -4.41 -4.4 -5.1 -4.27 0.65 - -0.44 -2.44 -3.09 -5.16 0.17 -1.12 -2.59 -4.27 - 1.47 - -0.42 2.51 -0.62 -2.34 - - 3.18 - -1.03 2.05 2.28 0.85 -0.71
Zm00001d045321 (GRMZM2G098750)
-9.44 -5.81 - - -4.63 -7.69 -10.11 -8.37 -9.24 -7.54 -6.98 -4.35 - -5.37 -8.49 -4.09 -6.8 -5.7 -7.58 -2.52 -9.68 - - -5.31 -3.77 -3.9 1.02 0.38 -0.45 -6.41 4.41 -2.48 0.41 3.24 -5.9 -5.16 -6.19
- - - - -2.72 - - - - - - -3.32 - - - -2.2 - -1.97 - 0.86 - - - - - - - 1.89 - - - 4.23 2.09 2.96 - -5.42 -
- - - - - - - - - - - -5.28 - - - - - - - -2.98 - - - - - - - 2.37 - - - - 3.74 4.19 - - -
Zm00001d047259 (GRMZM2G125813)
-6.71 -2.81 -2.44 -2.77 -1.28 -5.34 -5.11 -0.91 -8.43 - - -3.13 -1.23 1.87 -4.03 1.8 -1.89 -3.15 -4.55 -6.52 0.46 1.44 - -3.18 0.72 -0.11 -0.87 0.72 0.42 1.07 3.66 -0.06 -1.25 -0.9 -6.68 -3.04 -2.01
Zm00001d047710 (GRMZM2G083186)
-2.42 -1.53 1.02 -3.67 -0.44 -2.68 -1.15 -1.15 -0.81 0.66 -1.05 0.02 -1.92 0.26 -2.55 -0.07 -2.06 -0.27 1.17 -2.82 -1.21 -2.01 0.79 -1.28 -1.55 - 1.36 0.85 0.0 - 2.51 0.43 -0.65 2.43 -2.59 0.01 -2.92
-1.9 1.83 -0.96 - -0.3 - - 2.84 - 0.35 0.65 -3.85 - 1.11 0.59 0.82 - 1.55 0.96 - - - - 0.25 -0.41 - 0.7 -0.29 - - 1.76 - 0.91 -0.38 -0.46 -1.52 -
Zm00001d048629 (GRMZM2G107286)
-10.17 - - - -6.36 - - - - - - -6.79 - -5.33 -6.04 -10.15 - -3.22 -11.95 -4.62 -9.17 - - - - -2.57 -1.09 -3.84 - - 4.6 - -1.41 3.51 -9.26 -5.72 -9.22
Zm00001d048948 (GRMZM2G419675)
- - -5.62 - -3.13 -5.91 -3.44 -3.93 -8.43 - -1.96 -4.61 - -6.24 -5.55 -7.83 - -4.78 -3.62 -9.49 - - -2.46 -4.41 -4.59 -2.06 3.45 1.85 - - 1.86 - 0.53 3.97 -3.08 -2.16 -3.6
Zm00001d049813 (GRMZM2G047533)
- - -1.36 -0.2 -1.58 -3.45 -4.69 -3.69 -3.47 -4.23 -2.5 -2.1 -2.05 2.78 -2.79 0.57 -4.03 -3.08 -0.06 - -1.63 -3.21 -0.78 -4.07 -3.73 -4.94 1.92 0.73 -1.71 - 3.57 -2.35 1.52 1.12 -3.2 -1.92 -1.48
Zm00001d050984 (GRMZM2G453494)
- - - 4.24 -2.62 1.17 0.45 - - - - -3.94 - - - -3.69 - - - -1.25 - - - - - - - -1.65 - - 1.6 - - 3.3 - -0.89 -
Zm00001d051459 (GRMZM2G044627)
-6.91 - -7.35 -8.28 -7.56 -0.58 - - - - -6.61 -3.22 - -7.41 -4.15 -4.79 - -11.23 -11.97 -9.02 -9.48 -9.38 - -8.98 -11.03 - -1.09 0.7 - -8.27 4.81 -2.0 0.71 1.98 -11.79 -2.98 -6.71

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.