Heatmap: Cluster_155 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d002638 (GRMZM2G371933)
- - - - 0.48 - - - - - - 0.66 - - - 0.55 - - 3.08 - - - - - - - - - - - - - - 3.84 3.02 0.74 -
- - - - 1.91 - - - - - - - - - - - - - 5.05 - - - - - - - - - - - - - - - - - -
Zm00001d003188 (GRMZM2G051921)
-1.53 -2.01 -2.85 -1.4 -1.81 -5.81 - -3.46 - - -4.24 -4.25 - -5.29 -3.84 -4.6 - -5.57 -2.28 - -3.41 - - - -1.22 -0.71 3.35 1.54 - - 3.38 -3.01 -0.24 3.01 -0.89 -0.48 -2.96
Zm00001d003190 (GRMZM2G051943)
1.64 1.15 -2.5 -4.86 0.7 -5.11 -7.23 -2.67 -10.62 -6.38 -3.73 -3.71 - -8.01 -1.58 -3.48 -10.78 -0.72 -1.92 -7.87 -12.27 -8.74 0.02 -6.15 0.23 -0.23 2.63 1.33 -5.1 -5.95 1.59 -7.68 -0.27 3.48 -1.5 -0.84 -1.12
Zm00001d003422 (GRMZM2G137161)
-5.51 -5.19 -3.11 -0.43 -1.95 -0.36 -0.6 0.73 -0.67 -0.95 0.72 0.73 -4.98 -3.51 -0.32 -3.29 -1.33 -0.73 1.39 -3.7 -0.96 -1.95 2.92 -2.28 -0.09 - -0.53 -0.6 -0.25 1.38 1.66 -3.06 0.16 -0.01 -0.25 0.2 0.95
-0.67 0.02 -6.77 -0.54 0.23 - - -5.89 - -4.47 - -5.66 -3.41 -4.48 -7.21 -3.68 -5.12 -3.31 -0.77 -5.01 -3.44 -2.25 - -6.91 -3.14 -3.71 1.15 -0.04 0.18 2.08 2.73 - -1.24 3.96 -2.96 -0.87 -3.16
- - 3.18 - 2.71 - - - - 2.5 - -0.49 - - - 0.23 - - - - - - - - - - - - - - - - - 3.68 - 0.11 -
1.24 - 3.18 - 1.91 - - - - - - 0.24 - - - -1.44 - 2.16 - - - - - - - 2.19 3.18 -0.64 - - - - - - - 0.63 -
-2.19 -0.65 -2.14 0.58 0.13 -3.2 -2.03 -2.89 -2.39 -2.38 1.46 1.07 -1.28 -2.31 -1.14 -1.66 -2.95 0.28 -0.03 0.72 -3.36 -2.8 1.9 -2.28 -0.22 -1.61 2.23 -0.01 1.38 0.33 0.96 0.32 -0.18 1.4 -2.33 -1.86 -2.6
- - - - - - - 4.87 - - - -1.31 - - - -0.75 - - 1.91 - - - - - - - - 0.66 - - - - - - 0.44 - -
- - - - 0.62 - - 3.79 - - - -0.4 - - -0.94 1.15 - - - - - - - - - - 3.2 0.32 - - - - - - - 2.95 -
Zm00001d008899 (GRMZM2G159752)
1.11 - - - 2.95 - - -1.73 - - - -2.12 - - -0.57 -2.18 0.42 -0.49 - -4.84 -2.83 - - 2.19 -0.43 - 1.31 -4.14 3.34 - - 0.8 -2.99 -2.79 -1.7 -0.49 1.32
Zm00001d010176 (GRMZM2G152836)
0.06 - - - -0.91 - - - - - - 0.27 - - - 0.02 - - - -1.15 -0.37 - - - - 2.81 - -1.75 - - - - 2.93 3.75 0.59 -2.52 0.96
- 3.01 - - 0.93 - - - - - - -1.84 - - -0.93 -1.66 - - - - - - 4.13 - - - - - - - - - 0.3 2.03 -0.47 1.29 -
Zm00001d012014 (GRMZM2G371056)
- - - - 2.14 - - - - 2.88 - -0.15 - - - -0.33 - - 2.02 1.67 - - - - - - - - - - - - 1.91 3.15 - 1.87 -
Zm00001d012050 (GRMZM2G107498)
0.77 -0.22 -0.16 1.39 0.12 -1.24 -1.43 -1.11 -0.35 -0.73 -1.33 -0.29 -0.22 -0.77 -0.68 -0.43 -0.31 -0.27 -0.49 -6.35 0.08 -1.45 0.6 -0.11 -0.11 0.11 -0.02 -0.71 1.88 1.06 -0.21 0.79 -1.18 -0.21 1.09 -0.47 -0.27
Zm00001d012864 (GRMZM2G399778)
- - - - 1.34 - - - - - - - - - - - - - - - - - - 3.87 - - - 1.36 - - - - - 2.35 - 3.61 -
Zm00001d013581 (GRMZM2G085405)
- - - - -1.2 - - - - - - -0.5 - 3.54 0.15 -1.67 - - - - - - - - - - - - - - - - -1.47 3.81 0.54 0.29 2.51
Zm00001d014429 (GRMZM2G143182)
- - - - -0.2 - - - - - - -4.71 - - - - - - - 3.56 - - - - - - - 2.03 - - - - 2.72 3.77 - - -
Zm00001d014914 (GRMZM2G345717)
-3.6 -5.74 -5.7 3.28 0.72 -0.96 -2.0 - 0.85 1.96 -3.75 0.43 - -5.26 1.33 -1.94 -7.62 -4.16 -4.2 -7.45 -5.28 - 1.06 -8.2 -3.35 -2.09 -3.23 -2.02 - - 0.33 1.26 -3.06 -1.81 -5.57 0.97 2.56
Zm00001d016840 (GRMZM2G460958)
-4.32 - - -0.09 1.52 0.3 -0.14 - -1.91 - 0.24 2.23 - - -0.03 -2.96 - - 1.22 -0.25 -2.92 - -1.87 -2.05 -2.6 - -1.71 1.46 2.45 - -0.99 - 1.3 -4.14 -1.8 2.83 -0.31
Zm00001d017031 (GRMZM2G101605)
- - - -5.3 -4.01 - -7.08 -5.67 - - - -7.43 - -5.69 -6.49 -6.12 -6.81 -6.42 -5.33 -9.76 -6.48 -6.45 - -6.69 -5.8 - 4.35 -0.55 - -5.44 2.27 -4.35 -2.1 3.39 -8.11 -4.53 -
Zm00001d017032 (GRMZM2G109959)
-7.61 -10.84 - - -5.7 -7.45 -7.43 -2.61 -9.25 -11.03 -5.72 -3.55 -6.88 - 1.32 -7.81 -7.01 -6.0 -4.87 -6.63 -12.8 - -8.72 -5.65 -5.83 2.99 0.86 -0.73 - -8.02 1.55 -6.24 -1.63 3.82 2.56 -2.16 -2.92
Zm00001d017238 (GRMZM2G079596)
0.86 - - - -0.98 - - - - - - -2.37 4.03 - - 0.19 - - 1.5 - 0.65 - - 1.84 - - - - - - - - -0.01 - 1.78 2.21 -
Zm00001d017501 (GRMZM2G004768)
0.09 -0.05 0.09 0.61 0.16 -0.16 0.15 -0.28 0.05 0.16 0.1 0.29 -0.0 0.01 0.08 -0.02 -0.27 -0.72 -0.53 -5.87 -0.52 -1.27 1.4 -0.8 -0.01 -0.1 0.31 0.23 -0.21 -0.37 0.39 -0.84 0.22 0.37 0.21 0.18 -0.16
- - - - - - - - - - - - - - - 1.64 - - - - - - - - - - - - - - - - - - - 5.08 -
Zm00001d019758 (GRMZM2G170734)
- - -5.16 - -0.79 -1.08 - - - -5.39 -4.55 1.4 - - -1.75 -4.64 - -5.25 -2.5 -5.6 -6.39 - 1.21 - -0.77 - 3.76 1.68 - - -1.48 - - -1.82 -8.12 3.17 1.75
-8.44 - -3.89 -5.31 -1.15 -3.67 -7.05 -4.8 -6.67 -8.0 -3.82 -1.5 - - -2.24 -5.02 -6.5 -6.31 -7.23 - -9.22 -6.46 1.49 -6.8 -6.67 - 0.11 -0.99 - - 3.65 - -2.25 4.05 0.53 -2.04 -2.2
Zm00001d019961 (GRMZM2G334162)
-2.06 -0.36 0.05 2.35 -0.62 -0.39 1.09 -0.29 0.41 0.18 - 0.43 - - 0.39 -0.35 -0.02 1.2 -0.6 - 0.06 1.54 0.31 0.97 -0.57 -0.85 - -1.94 - - 0.59 - -0.87 0.74 -2.0 0.54 0.66
Zm00001d019962 (GRMZM5G875847)
- -0.53 1.31 0.99 -1.09 -0.77 0.52 - - -1.1 - 0.33 - - 0.39 -0.07 0.61 1.65 -0.31 - - 2.21 1.79 1.44 -3.62 - - -1.33 - - 1.75 - - 0.67 - 1.63 -0.76
Zm00001d020550 (GRMZM2G339728)
-3.09 -6.89 2.85 0.73 1.9 -0.28 -2.64 -1.83 -0.79 -1.5 -1.92 0.12 -1.56 0.1 0.92 1.51 -5.27 0.79 -3.57 -7.8 -3.62 -3.12 -1.98 -7.86 -0.19 0.84 -0.46 -2.73 -1.83 - -1.34 - -5.81 -1.27 1.91 0.97 0.92
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.21 - - -
-8.34 -1.99 - - -3.06 -8.5 -1.45 -2.62 -1.18 0.69 - -2.86 -0.21 -6.41 1.01 -1.84 -1.08 0.0 -2.54 - -0.05 -3.95 -3.09 -0.97 0.73 3.45 1.18 -1.16 - -4.1 0.58 0.34 -3.57 2.33 1.05 0.43 -0.47
0.16 - -0.02 - -0.1 - - 2.27 - - - -0.24 - - -0.55 0.11 2.71 - - - 0.15 3.67 - -0.25 0.46 - - -0.52 - - - - - - -2.77 1.63 -
Zm00001d028120 (GRMZM2G380789)
- -1.84 -3.04 - 3.37 1.01 -0.82 0.84 - -2.26 0.84 -0.1 - - 0.21 -3.6 - 1.69 -0.88 - - - -1.41 -0.87 -2.46 - 1.53 1.52 - - -2.29 - - -2.74 -1.12 2.3 0.44
Zm00001d028904 (GRMZM2G069568)
- - - - - - - - - - - -5.36 - - - -0.41 - - -3.61 - - - - - - -1.86 -1.46 2.82 - - - 1.73 3.3 3.93 - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.24 4.78 - - -
- - - - - - - - - - - -4.08 - - - -0.14 - - - - - - - - - - - - - - - - - 5.17 - - -
- - - - -6.79 - - - - - - - - - - -7.05 - - -1.4 - - - - - - - - 0.53 - - - 2.32 2.72 4.56 - - -
Zm00001d030670 (GRMZM2G075456)
1.78 -4.01 1.83 -0.36 2.67 -5.85 - -1.95 1.01 2.79 -4.32 -0.2 - - -1.23 -1.57 - -6.35 -3.46 -5.9 - - - - -1.73 - 0.94 -5.89 - - -7.01 - -6.0 -1.89 -5.24 2.21 2.21
0.01 - - - 0.18 2.67 - 1.9 - - - 0.37 2.97 - -0.95 0.92 - -0.93 1.55 -2.42 - - - - -0.59 - - 0.58 - - - - - - -3.14 2.36 1.13
- - - - - - - - - - - - - - - - - - - 2.51 - - - - - - - 1.55 - - - - -0.55 4.79 - - -
Zm00001d031432 (GRMZM2G121302)
- - -2.68 - -3.19 -2.41 -2.13 0.23 -1.33 1.35 -1.09 -0.02 -0.44 - -3.89 -1.14 -0.82 -0.98 -0.21 -3.27 -0.5 0.77 - -0.31 1.49 -0.08 - -1.05 - 0.62 2.49 1.3 -5.03 2.46 0.51 1.78 -
1.41 -1.59 2.85 2.3 1.53 - -7.2 -3.23 -4.53 -3.57 -5.15 -3.93 -1.47 -0.5 1.1 0.68 0.18 -0.06 -0.5 0.5 -1.09 -0.97 -4.62 -1.37 -2.04 -1.86 1.02 -1.77 - -1.3 0.82 -2.21 -1.17 -0.01 -1.57 -1.28 -0.29
Zm00001d032969 (GRMZM2G016241)
-2.1 -1.54 -1.83 1.26 0.33 -1.35 -1.94 -0.58 0.59 1.19 -1.0 -0.16 -0.54 0.0 1.09 0.64 0.41 0.17 -1.08 -6.48 -3.57 -0.75 -2.05 0.73 0.34 -0.48 -0.2 -0.76 0.66 1.57 -1.15 0.32 -1.13 -1.34 -4.11 0.83 1.44
- - - - -0.2 - - - - - - -1.6 - - - 1.38 - - 2.12 - - - - - - - - - - - - - -0.27 2.92 - 4.35 -
- - - - -2.18 1.27 2.13 -1.06 - - - -0.82 - - - -3.07 -0.61 4.12 -1.08 - - 2.22 - -0.06 -0.1 - - - - - - - - - -3.69 1.89 -
Zm00001d034925 (GRMZM2G387394)
-2.67 -3.58 -5.1 0.17 1.41 -2.19 -2.29 - 2.01 2.66 -3.26 0.52 - - 1.48 -3.12 - -3.21 -2.57 0.24 -4.21 - 1.68 - -3.3 1.69 -2.06 -1.1 - -2.77 -3.86 - -6.64 -4.88 - 1.87 2.34
Zm00001d035553 (GRMZM2G099619)
-4.02 -6.55 -4.01 0.09 0.7 -1.61 -1.38 -3.45 -2.69 -3.44 -1.97 -0.87 0.66 -0.98 -1.14 0.48 1.24 1.29 2.5 - -3.49 - 2.82 -3.86 0.36 -0.45 -0.32 -0.18 -0.11 -3.73 0.88 -0.71 -2.05 -1.79 -1.05 0.87 -0.5
- - 0.5 - -1.74 - - - - - - 0.49 - - -0.69 -0.45 2.86 1.81 -0.38 -2.66 -1.81 1.43 - 0.38 0.87 - - 0.48 - - 2.41 - -2.76 1.44 - -1.61 2.28
Zm00001d037542 (GRMZM2G174621)
-6.88 - 0.61 0.55 2.12 -2.71 - - 0.54 -1.84 -2.59 -1.27 -2.12 - 0.5 -2.19 -6.16 0.64 1.45 -4.39 -5.49 -4.08 2.53 -5.13 -2.19 -3.01 2.22 0.49 1.47 - -0.58 - 0.41 -0.8 -0.01 1.15 -2.93
Zm00001d039055 (GRMZM2G440452)
- -1.97 2.29 - 1.3 -1.61 -2.33 -0.74 -1.86 0.28 - -1.57 0.83 - 0.94 1.48 -2.62 -2.93 -0.11 - -2.0 1.39 - -0.05 1.6 - 0.27 -1.88 - - -3.68 2.58 -4.0 -1.27 -0.06 1.11 -0.54
Zm00001d039424 (GRMZM2G133168)
-2.27 - 1.11 -1.57 -0.54 1.66 -0.01 - 1.53 0.44 -1.05 0.83 -2.63 - 1.17 -3.36 -3.85 -2.79 -1.12 -6.02 0.33 -0.91 - -2.17 -1.74 -0.74 -0.61 -3.22 - - 0.86 - -4.44 -0.97 2.85 1.99 1.34
- - - - - - - - - - - -1.64 - - - -3.96 - - 0.42 - - - - - - - - 0.21 - - 4.18 - - 4.0 - - -
- - - - - - - - - - - 0.8 - - - -2.13 - - 3.44 - - - - - - - - 2.49 - - - - 0.23 4.06 - -0.42 -
-0.99 - 2.05 - 0.68 - - - - - - 1.02 - - -2.4 -1.75 -0.06 2.6 -0.78 0.69 - - - 1.88 -0.78 1.54 1.4 0.1 - - - - - 0.66 -0.68 2.56 -
Zm00001d041217 (GRMZM2G018793)
- -5.17 -3.55 -1.81 0.64 -1.85 3.15 -2.99 - -7.05 -2.62 -1.23 - 0.26 -2.61 -2.14 -5.39 -1.71 -0.1 -3.0 -1.89 -4.51 1.43 -5.11 -0.06 - 1.49 -1.81 - - 3.35 -4.4 -0.92 1.86 -3.18 -2.31 -1.34
- - - - - - - - - - - - - - - -6.0 - -2.11 -5.12 - - - - - - - - 1.83 - - -2.87 - 1.45 4.92 - -4.99 -
Zm00001d042801 (GRMZM2G154958)
0.1 -0.98 -1.24 0.46 0.62 1.45 1.35 -1.95 -1.15 -0.92 0.1 0.95 -6.87 -2.0 0.31 -1.85 -3.76 -1.29 -3.8 -9.99 -5.28 - 2.42 -2.46 -1.22 0.49 0.11 0.28 1.9 -4.25 0.16 -0.92 -4.44 1.75 -3.46 -0.08 -0.56
- - 1.41 - -1.92 - - - - - - 1.18 - - - 0.83 - 3.99 1.65 - 1.74 - - - - - - 1.14 - - - - -1.65 2.15 - -0.57 -
- - 4.22 - - - - - - - - -0.8 - - - 0.62 - - - 4.03 - - - - - - - - - - - - - - - - -
Zm00001d045906 (GRMZM2G177084)
- - - - -5.26 - -5.5 - -3.63 - - -3.16 - - - -6.32 - -0.22 -6.05 -0.49 - - - - -3.11 - -0.27 -1.47 - - 4.45 - -2.66 3.57 - -4.55 -
Zm00001d046346 (GRMZM2G340177)
- - - - 1.37 0.52 - - - - 0.85 1.43 - - -0.67 -3.45 - -1.88 1.04 - - - 3.2 - -1.52 - 1.94 1.17 - - - - - -4.04 1.26 2.67 0.08
-0.23 -2.24 3.44 0.28 2.1 -1.54 -1.68 - -3.54 - 0.26 1.43 - - -0.46 -1.6 - -0.69 -4.46 - - -0.97 0.96 - -3.01 - 1.83 -0.09 - - - -0.02 1.19 -0.22 -1.76 -0.09 -0.33
Zm00001d049290 (GRMZM2G389937)
- - -3.62 - 1.5 -4.89 -2.94 -3.25 3.47 1.82 -1.99 -0.47 - -2.51 1.66 -0.56 - 0.16 -0.23 -3.58 0.2 -2.62 -3.31 -3.21 -0.24 0.16 1.95 -0.26 - -0.19 -3.43 - -2.22 -2.14 -0.5 0.88 -
Zm00001d049433 (GRMZM2G074443)
- - - - 2.27 - - - - - - -1.28 - - - - - 4.8 - - - - - - - - - - - - - - - - - 1.94 -
-2.17 1.08 0.57 1.37 -0.15 - - -0.69 - - - -2.23 0.27 - -3.37 -0.09 0.85 0.72 0.38 -3.21 -0.6 1.15 - 1.4 -1.48 - -1.3 0.91 - 1.33 1.5 - -0.34 2.52 0.47 -2.48 -2.39
Zm00001d050798 (GRMZM2G044773)
-1.14 - - - 2.38 -2.93 - -2.27 - - -1.03 -0.14 - - -2.43 -2.5 - - -3.79 -5.6 -3.66 - 4.07 - -3.7 - 2.52 0.69 - - 0.8 - -3.74 -1.81 -2.75 1.21 -1.63
Zm00001d051403 (GRMZM2G392975)
-0.12 -2.08 1.45 -0.55 1.06 0.53 -0.91 -0.58 -0.59 -1.38 -0.87 -0.51 0.98 1.43 -0.22 1.11 -0.87 0.15 -0.83 -9.33 1.19 0.27 -1.36 -1.82 0.34 0.69 0.93 -0.72 -0.08 0.4 -0.98 -4.18 -4.42 -0.94 -1.42 0.14 0.11
- - - - - - - - - - - - - - - - - - 2.39 1.93 - - - - - - - - - - - - - 4.8 - - -
Zm00001d052016 (GRMZM2G344376)
0.68 -1.71 -0.91 - 1.86 -5.06 - -1.84 -4.33 -4.74 -2.95 -2.19 -4.45 - -1.36 -3.83 -3.48 -0.2 -1.15 - -6.05 - -3.18 1.79 -2.65 -1.6 1.71 -0.83 2.73 -0.27 -1.05 3.27 -1.43 0.03 -2.86 -0.87 -0.47
Zm00001d052040 (GRMZM2G010933)
0.73 1.23 -0.4 0.89 0.1 -2.15 -0.22 -0.28 0.05 -0.37 0.37 0.63 -2.77 -1.23 -0.52 -2.12 -0.89 -0.2 0.73 -4.05 -2.93 -4.46 1.56 -1.77 -0.82 -1.48 1.33 -0.87 2.36 -5.58 0.01 -0.19 -0.92 -0.23 0.15 -0.42 -1.15
- - - - 2.28 - - - - - - -5.2 - - -6.95 -10.84 - -2.31 - -0.83 -2.56 - - - -2.31 - -2.35 -0.93 - - 3.47 - -0.32 4.14 -7.11 -5.73 -0.31

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.