1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_138 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

 Transpose table  Download table
Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
Smo105019 (F2KP)
 6.3 5.95 5.88 7.63 8.96 7.51 7.05 9.08 8.7 8.21 6.8 7.75 0.67 0.65 9.47 1.22 4.71 4.07 3.41 8.33 12.51 4.25 2.2 1.55 10.55 16.62 15.08 16.54 5.21 5.07 3.24 2.5
5.09 4.23 4.92 5.52 5.81 5.28 5.58 5.95 7.26 6.76 6.95 6.15 8.87 6.26 9.58 8.51 4.19 2.34 7.86 12.13 7.52 19.82 6.29 8.39 6.85 27.23 17.3 16.75 4.55 5.33 6.05 6.39
Smo112122 (NPSN13)
 0.1 0.0 0.22 0.39 1.81 0.5 1.06 0.18 0.39 0.31 0.18 0.08 0.08 6.56 8.8 0.17 0.0 2.11 0.3 0.0 0.4 0.0 0.45 0.58 0.57 8.32 10.38 5.7 0.15 0.23 0.0 0.07
Smo123026 (APG10)
 0.08 0.08 0.0 0.0 0.0 0.0 0.0 0.07 0.1 0.0 0.0 0.0 0.0 0.71 2.19 0.08 0.0 0.12 0.0 0.63 0.0 2.42 0.08 0.0 0.63 1.08 0.44 0.0 0.0 0.0 0.0 0.07
9.95 10.83 8.8 11.46 16.8 16.1 13.07 13.34 13.4 12.88 14.75 11.97 14.14 10.22 22.94 13.33 9.65 8.22 18.57 12.87 11.64 38.76 13.54 15.9 16.13 20.3 19.21 16.68 9.35 10.97 7.57 9.19
44.69 49.21 41.79 56.06 40.39 55.17 47.39 48.03 54.74 40.45 44.09 40.97 61.01 46.09 87.37 65.35 52.38 54.21 78.01 58.44 18.66 20.17 49.42 53.98 93.22 163.62 215.05 199.05 50.84 49.94 40.99 55.25
14.7 18.09 20.84 23.54 30.74 31.9 34.82 34.28 28.19 25.64 22.57 17.92 22.63 18.81 39.97 20.89 19.01 18.59 26.41 42.96 12.0 34.21 18.62 20.19 35.64 48.96 80.77 82.84 19.46 19.41 14.19 17.03
Smo153534 (BGLU40)
 15.29 20.17 14.42 17.73 15.51 11.27 12.15 20.27 17.47 17.46 17.85 16.03 17.24 47.57 75.46 35.93 8.83 4.32 70.18 0.0 1.97 1.69 10.85 15.78 30.35 65.61 55.35 40.19 12.79 13.7 10.63 11.72
Smo164431 (PTAC3)
 16.52 13.28 14.83 16.69 21.32 21.73 23.54 27.45 26.61 25.56 21.7 19.82 8.73 6.74 31.71 11.74 15.22 8.03 14.54 21.64 19.56 18.38 8.93 10.93 17.74 33.85 54.46 56.96 15.0 16.09 9.96 10.32
17.58 17.93 15.4 19.41 18.77 16.6 13.85 20.99 22.96 23.22 23.43 20.57 31.03 18.27 24.62 32.48 18.7 20.7 33.54 0.14 0.62 28.9 23.04 23.98 11.14 65.67 34.64 39.02 24.6 26.73 16.16 19.41
Smo168828 (La1)
 46.66 46.2 47.08 53.98 57.22 63.17 69.1 76.94 59.94 55.99 54.57 44.79 36.27 45.17 88.94 42.92 28.25 21.78 42.16 55.09 19.91 53.4 33.8 40.93 62.26 135.55 163.61 147.65 30.22 31.59 30.52 28.87
Smo171221 (WEE1)
 8.54 10.61 14.11 12.08 11.77 13.55 14.81 15.79 13.32 13.2 12.63 10.75 11.08 16.67 37.16 10.42 5.8 3.78 5.99 20.57 5.12 24.45 6.87 5.66 9.12 16.99 20.92 22.72 5.15 5.98 6.15 6.68
31.61 23.43 34.29 33.74 33.29 39.12 39.05 45.0 43.01 36.73 39.83 29.28 41.67 16.67 19.44 59.15 45.94 3.32 64.05 11.55 23.37 52.6 47.98 49.24 35.44 125.21 115.52 94.53 49.59 45.02 35.54 37.17
28.23 30.96 29.38 35.03 37.45 36.71 34.56 39.75 33.86 33.2 31.13 29.98 28.5 21.57 60.71 34.34 17.62 14.63 31.08 28.18 26.93 14.87 22.5 25.97 56.29 57.29 58.71 58.76 18.39 20.52 20.26 21.64
Smo175895 (NFD3)
 189.66 235.54 256.48 273.92 244.39 326.14 314.59 258.6 234.29 246.96 219.47 199.02 527.57 339.17 578.05 602.3 361.64 306.18 398.97 742.44 162.63 760.45 342.9 421.18 514.57 1601.76 939.24 1520.83 331.66 341.62 204.16 72.98
Smo179697 (SYP71)
 1.89 2.07 2.97 2.63 5.03 4.52 3.26 3.24 2.87 3.85 3.89 2.69 3.98 1.86 3.87 6.7 3.25 3.23 4.59 1.32 0.76 5.98 2.99 2.84 2.52 13.25 9.15 9.73 4.49 5.03 1.81 1.67
35.33 35.73 37.82 46.45 55.84 58.91 63.4 72.78 62.64 53.45 47.57 40.02 65.68 33.28 55.22 41.45 35.22 25.85 37.06 30.89 26.58 40.93 42.43 44.78 47.36 69.12 98.55 107.22 38.68 43.13 29.45 20.74
Smo230254 (TSL)
 8.3 10.39 8.79 12.09 13.53 11.04 13.11 15.5 13.14 13.73 11.95 12.14 10.07 9.37 9.95 10.15 8.57 3.05 12.88 0.9 0.76 18.32 8.78 9.28 10.71 28.27 27.41 26.34 8.82 9.19 8.13 7.99
115.93 132.79 133.37 129.0 128.29 180.98 154.23 205.68 138.88 102.01 119.13 90.73 109.31 103.62 115.09 154.58 174.42 277.25 171.47 551.01 410.0 971.57 146.66 153.78 401.91 467.99 967.41 771.32 171.15 149.99 250.47 242.64
0.23 0.04 0.05 0.17 0.05 0.33 0.31 0.32 0.15 0.23 0.33 0.31 0.05 0.39 0.71 0.11 0.26 0.11 0.17 0.23 0.12 0.87 0.15 0.52 0.71 1.59 1.27 2.15 0.11 0.22 0.07 0.05
5.05 5.42 5.23 5.22 7.6 6.19 6.6 5.23 7.23 10.07 7.13 7.59 13.65 30.19 32.78 17.57 5.84 5.63 17.28 0.0 0.18 0.73 7.06 7.35 5.73 36.6 29.42 35.85 4.73 5.47 4.44 3.91
Smo405358 (HSP60)
 14.42 14.01 19.6 21.21 28.45 35.34 39.97 44.22 33.78 25.06 20.56 15.24 18.57 15.07 58.66 21.22 13.72 6.73 25.72 21.96 22.58 16.73 14.78 19.62 49.04 47.96 86.14 77.54 16.9 20.12 10.3 7.49
Smo405981 (SWA2)
 11.21 12.12 11.97 16.11 18.06 20.34 22.76 21.97 18.7 16.59 13.86 11.84 14.41 10.62 28.08 14.67 9.29 9.04 16.41 11.22 10.56 14.93 11.01 12.44 23.45 34.59 44.23 49.13 10.18 11.38 5.29 6.52
0.9 0.88 0.53 0.97 3.26 2.31 2.82 3.1 2.01 2.26 1.63 1.07 0.38 0.66 3.22 0.51 1.14 0.7 1.74 0.13 0.0 0.21 1.15 0.86 3.16 3.67 8.7 6.68 1.63 2.0 1.29 1.49
Smo407478 (REV1)
 1.07 0.75 1.47 1.6 1.26 1.82 1.71 2.02 1.3 1.5 1.07 1.4 1.44 0.98 2.66 1.41 0.88 0.24 2.07 0.0 0.0 3.77 1.82 1.95 0.7 4.57 3.96 5.61 1.17 1.26 0.64 0.72
13.48 14.29 15.57 17.1 19.17 22.1 18.75 16.2 16.32 15.34 15.0 14.66 5.82 20.33 43.74 17.9 16.03 13.65 18.13 10.79 2.86 42.77 10.98 8.77 16.68 15.89 27.54 27.68 15.91 15.81 13.24 11.77
Smo411471 (MED8)
 13.23 15.09 16.18 15.64 18.99 18.3 16.75 17.65 16.91 15.16 15.81 12.54 17.57 15.03 20.03 19.52 11.22 8.41 17.53 13.08 13.84 16.99 15.13 15.83 32.63 51.29 38.71 45.07 11.36 12.86 6.65 6.91
Smo412557 (NAF1)
 3.78 3.78 5.43 5.19 10.64 7.77 8.9 7.74 4.96 6.4 3.62 3.44 7.53 3.14 18.21 8.87 4.73 4.0 10.96 3.24 2.16 21.7 6.04 7.11 2.01 10.8 16.89 17.02 5.72 6.35 1.48 2.38
Smo413633 (NIC1)
 0.6 0.16 0.0 0.38 0.09 0.15 0.08 0.0 0.0 0.0 0.04 0.04 0.1 3.95 3.74 0.38 0.0 0.11 0.19 0.0 0.12 0.0 0.0 0.04 1.22 2.4 2.53 2.74 0.0 0.05 0.05 0.0
1.6 2.58 1.89 2.01 2.15 2.24 1.93 1.88 2.03 1.82 1.6 1.72 1.72 2.63 4.11 2.58 1.38 0.72 2.61 0.0 1.48 0.0 1.78 2.16 4.6 4.57 7.75 5.61 1.71 1.72 1.02 0.9
1.16 0.0 0.0 0.0 0.55 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.25 0.0 0.0 0.56 0.83 0.0 0.06 8.06 12.51 0.0 0.0 0.3 4.23 4.69 0.0 0.0 0.0 0.0 0.0
34.14 32.83 34.0 41.24 45.98 49.48 49.17 52.88 39.77 39.89 33.89 31.64 37.72 27.34 68.05 46.01 27.91 21.32 49.21 54.35 12.94 59.64 35.98 40.04 48.16 124.39 130.61 121.83 32.17 35.59 26.09 27.84
14.76 10.56 12.9 12.84 15.35 14.29 15.8 16.98 15.3 13.33 12.62 11.59 15.28 19.61 38.67 17.32 9.57 8.57 15.88 13.29 9.29 25.0 11.69 13.89 9.78 23.51 20.36 16.06 9.64 9.86 6.57 9.52
2.99 4.15 2.32 3.4 5.2 4.08 3.06 6.33 3.81 3.86 4.77 3.35 4.34 0.54 2.74 5.24 4.07 0.88 13.93 5.12 8.72 22.4 6.57 9.18 16.35 24.37 11.76 15.38 5.02 6.19 5.48 6.1
0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25 0.55 0.0 0.0 0.03 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.07 0.23 0.18 0.0 0.0 0.02 0.0
2.41 2.16 2.46 2.8 2.76 1.61 5.55 4.91 4.69 8.55 6.06 5.34 5.77 1.9 1.9 4.35 2.73 0.11 3.43 2.77 7.42 23.02 2.79 3.15 8.83 20.29 7.47 10.51 3.65 3.47 3.71 3.8
13.26 12.78 12.77 18.46 20.91 27.99 29.4 33.08 23.94 24.34 17.45 20.08 21.55 12.53 27.69 21.52 9.38 7.08 18.47 23.95 21.89 33.93 16.73 21.52 57.52 78.87 87.73 101.3 11.85 14.4 5.14 6.59
0.06 0.06 0.0 0.03 0.0 0.12 0.0 0.2 0.0 0.12 0.03 0.16 0.33 3.6 5.18 0.58 0.25 0.05 0.76 1.73 0.57 4.5 0.31 0.53 2.17 6.34 7.11 5.7 0.57 0.85 0.19 0.34
134.01 104.55 92.18 102.76 104.12 109.18 86.49 106.87 95.19 93.48 100.96 89.58 91.65 173.89 142.52 99.26 64.96 78.43 80.23 47.63 74.52 76.21 65.67 73.47 136.81 275.68 284.88 254.51 59.63 60.94 82.42 77.33
0.13 0.1 0.04 0.04 0.05 0.17 0.05 0.3 0.04 0.05 0.36 0.1 0.06 1.88 3.58 1.2 0.05 0.0 1.1 0.09 0.55 0.0 0.18 0.16 0.0 0.12 0.91 1.01 0.11 0.32 0.21 0.15
0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.08 0.0 0.08 0.0 0.0 0.0 0.93 1.85 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.81 0.72 1.78 0.08 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.18 0.35 0.08 0.0 0.0 0.06 0.0 0.0 0.0 0.07 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.03 0.0 0.0 0.0 0.37 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.18 2.6 1.7 0.0 0.0 0.13 0.08 0.0 0.0 0.0 0.0 0.17 0.37 1.5 0.92 2.09 0.08 0.0 0.08 0.0
8.55 5.56 4.4 5.52 5.47 7.58 8.08 9.57 8.68 8.91 10.31 7.31 6.54 5.32 3.67 7.51 4.35 5.58 5.47 10.23 6.35 2.37 9.72 10.08 18.93 34.82 25.04 25.8 5.59 5.81 4.97 5.92
0.06 0.0 0.0 0.06 0.0 0.06 0.0 0.0 0.0 0.05 0.0 0.06 0.0 3.64 8.02 0.29 0.28 0.2 0.25 0.0 0.0 0.0 0.27 0.44 0.0 6.6 6.36 3.83 0.12 0.06 0.13 0.06
0.05 0.11 0.0 0.15 0.0 0.18 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.48 0.65 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.06 0.11 0.0 2.78 2.58 0.57 0.0 0.0 0.0 0.05
Smo430428 (ROP1)
 31.28 30.72 28.59 30.85 31.95 31.43 29.23 26.97 31.21 32.07 31.65 29.53 29.68 29.75 35.9 36.45 24.69 13.79 37.81 40.85 19.59 21.06 29.17 30.86 47.15 89.3 68.24 76.89 24.32 27.33 14.75 15.21
0.0 0.0 0.0 0.0 0.0 0.0 0.07 0.24 0.0 0.0 0.0 0.0 0.0 0.84 1.4 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.18 1.62 0.69 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.05 0.1 0.0 0.05 0.16 0.0 0.11 0.08 0.0 0.44 1.47 2.9 0.0 0.0 0.23 1.2 2.53 1.8 0.0 0.0 0.0 0.0
26.34 25.74 29.13 25.96 25.91 25.96 21.11 23.57 23.09 22.63 21.66 21.23 22.16 21.17 33.56 33.87 19.17 15.33 25.37 19.6 22.89 29.42 18.8 19.75 31.31 53.86 52.69 54.57 22.39 22.9 11.25 10.78
Smo438877 (TDT)
 44.33 51.19 51.16 56.25 57.6 57.18 53.83 52.65 50.01 47.48 45.09 40.71 51.97 62.28 106.63 63.96 35.66 28.41 59.22 38.06 42.1 33.9 45.51 51.92 77.56 98.17 115.34 118.16 35.66 39.54 25.43 23.63
80.37 85.89 91.32 107.78 115.78 116.58 109.55 114.99 108.75 104.21 101.3 83.2 118.26 156.03 184.85 110.07 61.68 54.89 78.68 66.19 124.46 86.86 100.76 101.01 179.59 236.26 314.95 262.95 57.74 59.99 66.62 82.04
67.17 59.62 60.15 67.72 79.97 78.44 79.31 107.57 95.58 86.48 104.26 78.85 75.06 139.06 315.55 74.85 47.28 32.71 70.98 120.7 76.14 246.49 52.32 55.67 98.7 240.27 182.96 162.06 53.62 55.68 69.05 75.34
270.23 290.7 282.22 287.76 373.37 378.86 439.57 372.12 339.04 321.67 311.93 282.66 293.87 22.06 207.32 325.91 306.71 324.21 404.72 270.75 255.24 199.68 470.15 491.9 798.17 2076.43 1453.03 1560.69 295.64 268.82 270.98 250.31
Smo446868 (NOF1)
 12.1 12.42 14.49 20.74 21.58 23.48 24.98 31.19 25.8 22.0 17.92 16.09 29.78 14.5 40.38 29.2 9.95 4.9 23.62 20.37 17.34 13.06 13.7 18.07 41.95 71.19 53.5 55.09 13.44 15.36 8.44 7.02
14.1 13.34 17.28 17.43 19.1 24.21 19.04 20.18 18.18 15.6 16.4 15.71 19.63 18.71 42.34 20.12 13.21 15.99 22.5 23.61 12.42 41.09 23.46 18.67 13.35 67.75 81.6 79.43 14.11 13.83 8.65 10.43
27.24 27.96 26.06 29.83 32.78 43.35 36.31 35.74 32.56 29.93 38.14 26.19 45.13 51.02 79.87 47.56 33.52 37.34 44.29 6.87 6.12 128.73 39.64 42.65 9.23 86.22 86.94 71.51 37.33 35.42 33.99 36.26
Smo73763 (UTP11)
 26.94 24.85 23.07 28.95 28.24 29.42 27.38 25.21 24.18 21.78 23.81 21.83 25.16 29.01 61.37 30.47 23.71 23.95 32.94 9.06 10.43 53.83 22.44 24.37 19.97 62.92 82.77 76.03 21.96 21.0 30.75 33.27
25.8 27.82 29.32 38.33 49.46 53.33 57.59 69.13 58.8 47.92 39.78 30.94 17.45 20.17 61.58 18.04 16.41 14.12 27.03 13.54 16.99 20.56 17.51 21.67 55.5 76.3 119.91 101.07 21.63 23.66 21.47 34.24
21.16 19.24 18.35 24.23 26.16 22.36 19.96 25.26 25.35 23.59 22.34 20.37 26.12 25.96 49.2 29.41 19.01 10.9 28.49 29.0 10.97 40.35 21.12 23.91 25.06 33.41 30.95 28.64 18.96 19.88 16.58 18.21
75.99 80.39 87.77 95.05 108.2 89.76 102.5 97.16 98.41 92.47 104.68 100.65 108.46 23.03 111.91 118.36 118.57 184.34 110.04 36.44 15.0 82.69 107.41 117.13 35.49 271.24 203.61 159.39 116.95 109.53 103.45 102.65
6.78 4.77 6.17 6.19 8.92 5.39 4.33 7.23 6.05 5.15 7.05 5.16 7.81 15.44 18.25 9.04 5.69 5.97 6.62 7.59 7.88 15.71 6.37 6.41 11.54 12.37 15.67 13.26 6.42 6.05 6.97 5.79

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)