Heatmap: Cluster_122 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d000117 (GRMZM2G177510)
1.16 0.02 0.84 0.34 1.63 0.15 -1.9 -1.48 -0.32 -0.47 -2.35 -1.71 -2.86 3.37 0.05 -2.07 -3.74 -1.95 -0.02 -5.78 -4.65 - - 0.71 -3.33 0.67 -1.09 1.98 - - -5.16 - -5.75 -1.23 -2.76 0.52 -0.16
Zm00001d000318 (GRMZM2G306172)
- - -4.07 - -3.67 -0.03 1.78 0.08 - - -2.82 0.23 - 4.15 -4.94 -2.33 -1.22 - 0.82 - -4.89 -2.57 2.2 -4.74 -2.52 -1.24 - -2.52 - 0.42 - - -4.63 -6.2 -0.43 0.37 -0.23
- - - - -3.1 -0.89 - - - - - -1.19 - 3.87 - -1.33 0.84 - -0.28 - -0.5 - - - - 4.09 - - - - - - - - - -1.16 -
Zm00001d002747 (GRMZM2G028969)
- - 1.52 - 1.5 - - -3.36 - - - -5.61 - 4.84 -6.05 0.19 -3.53 - -3.11 -5.27 -3.11 -2.25 - - -2.53 - - -3.44 - - -4.59 - - - - -0.87 -
Zm00001d002882 (GRMZM5G839763)
0.33 -1.41 -0.84 0.44 0.38 -0.99 -1.48 -0.37 -1.8 -1.73 -2.69 -0.69 -0.2 1.48 -0.61 -0.0 -0.1 -0.62 -0.14 -6.16 0.84 -0.47 0.47 0.55 -0.73 -0.87 -0.23 0.31 -0.49 1.12 1.43 1.01 -0.29 -0.7 1.01 -0.48 -0.01
Zm00001d003185 (GRMZM2G051571)
1.32 -0.96 -2.15 0.5 1.73 -4.81 -4.85 -1.92 - - -0.86 -2.24 -2.9 1.75 -3.27 -0.7 -1.82 -4.35 0.25 - 1.09 -4.53 1.24 1.06 0.51 - -0.36 0.75 0.25 1.53 2.17 -0.28 -4.83 -2.53 -1.47 -1.16 0.33
0.91 1.12 0.61 - -0.04 - - - - - - 0.62 - 3.69 -2.19 0.14 - - 1.08 1.56 - - - 2.77 - - - -1.64 - - - - - -0.62 -1.14 -2.57 0.31
Zm00001d003272 (GRMZM2G022627)
-0.92 -2.09 -1.7 -0.06 1.15 -2.84 -2.72 -2.13 -3.03 -2.76 -5.1 -1.94 -2.4 2.9 -1.25 0.74 -2.96 -1.01 -0.35 -7.11 -1.47 -1.71 -5.46 0.28 -1.38 -2.58 0.01 -0.08 2.0 - 3.19 - -2.09 0.56 -1.14 -0.9 -1.91
Zm00001d003783 (GRMZM5G858609)
- - -1.52 - 0.11 0.44 - - - - 0.01 -2.35 - 4.26 - 0.16 - -0.47 -0.17 -0.59 - - - - -1.64 2.74 - 0.37 - - - - -0.79 - - - 0.61
Zm00001d003784 (GRMZM2G076584)
-1.17 -0.2 -3.44 -1.07 0.1 -2.42 -7.52 -2.31 -4.54 -4.49 -5.07 -2.35 -3.9 2.69 -1.9 -0.77 -1.84 -0.42 2.11 1.46 -0.05 -4.44 -2.37 -0.23 -0.84 -5.39 -2.34 0.56 0.99 1.65 1.62 -0.83 0.79 -0.88 -4.3 -0.77 0.9
Zm00001d005060 (GRMZM2G455407)
- - - - -2.83 - 0.46 - - - - -0.8 - 4.98 - 1.3 - - - - - - - -1.37 - - - - - - - - - - -0.9 - -
- - - - 0.04 -0.1 - - - - - -4.9 - 5.03 - -1.95 - - - - - - - - - - - -0.06 - - - - -2.33 - - -0.19 -
Zm00001d005715 (GRMZM2G030444)
-3.05 -6.75 -1.05 3.24 1.64 -5.12 -2.83 - - - - -1.07 - 3.34 -3.75 0.56 -6.94 -5.17 -3.01 - -5.63 -1.21 -1.51 -3.17 -0.33 -0.26 -0.63 -1.88 - - 1.53 - -1.12 0.98 -5.15 -0.05 0.66
Zm00001d005735 (GRMZM2G040840)
-5.15 -5.27 -3.63 -1.34 -0.03 -0.97 -1.22 -0.59 -1.86 -1.29 -2.04 -0.29 -4.42 2.56 -0.5 -0.11 -1.37 -0.18 -0.66 -3.33 -0.1 -1.79 2.12 0.17 -0.41 -0.13 -2.99 1.05 0.31 0.9 2.22 0.86 -2.98 -0.63 -1.26 -0.66 -0.78
Zm00001d006217 (GRMZM2G063533)
-5.89 -6.16 -1.52 -2.2 -0.46 0.09 -1.75 0.29 -1.28 -1.03 -0.38 -0.29 -0.6 1.47 -0.57 -0.83 -0.53 -0.29 0.1 -7.68 1.19 0.27 -1.17 0.65 1.08 -0.73 0.47 0.78 0.56 1.09 1.4 0.02 0.57 0.23 -0.91 -0.51 -0.16
Zm00001d007665 (GRMZM2G346346)
- 1.56 - - -2.87 - - - - - - -6.28 - 4.13 - -1.16 - - - 2.58 - - - - - - - 2.6 - - - - 0.07 1.55 - - -
Zm00001d009706 (GRMZM2G518198)
- - - - -1.97 1.93 - - - - - 1.0 - 3.95 -0.83 -0.48 - - 0.47 -1.16 - - - 2.69 -1.32 - - - - - 1.66 - -2.41 - -3.09 1.02 -
- - - - -0.51 -2.44 - -2.16 - - - -0.48 - 3.93 - 1.27 -0.12 - 2.54 -0.19 0.76 - - - - - - 0.6 - 0.38 -1.63 - 0.67 - -3.51 -1.12 1.54
Zm00001d011802 (GRMZM2G149587)
-4.31 -1.92 -1.1 -0.67 -1.11 -0.78 -2.11 -0.14 -0.61 -0.22 -4.33 -1.03 -1.75 1.62 -1.37 -0.47 0.42 1.19 1.18 0.07 0.13 -0.81 0.42 0.75 -0.89 -3.92 -2.54 1.19 -0.34 0.99 1.03 0.69 1.43 0.77 -0.91 -0.96 -1.66
- - -1.53 - -0.16 0.43 - - - - - -4.84 - 3.87 - 1.99 - - -1.72 -3.42 1.94 - 2.05 - - - -1.21 0.73 - 1.32 - - -2.62 - - -6.12 1.41
Zm00001d013109 (GRMZM2G320506)
1.19 -0.75 -0.23 0.36 1.63 -0.37 -4.06 -1.25 -1.42 -1.01 -3.15 -1.71 -1.8 1.98 -1.09 0.18 -3.04 -0.7 -0.18 -1.62 -1.87 -2.32 -0.12 -1.61 1.61 -5.13 -0.14 1.17 - 2.22 1.32 -3.54 -0.44 -0.37 -1.03 -0.49 -0.68
- - - - -3.88 -4.84 -2.63 - - - -1.75 -0.19 - 4.09 -5.1 -0.91 -2.46 2.78 -3.5 1.99 -3.42 - - - -3.96 -0.54 -2.07 -3.15 2.09 - - - -3.78 - -6.61 -1.34 -0.15
Zm00001d014127 (GRMZM2G701448)
- - - - -0.66 - - - - - - - - 4.71 - 1.45 - - 0.18 1.47 1.85 - - - - - - - - - - - - - - - -
Zm00001d014166 (GRMZM2G144420)
-1.16 - -4.18 -2.77 -0.02 -0.3 -3.17 -0.67 -0.96 -0.64 0.05 0.1 - 3.06 -1.32 -0.31 -6.47 -2.22 0.61 0.8 -3.07 -4.64 0.3 -3.25 -0.81 -1.67 -2.38 1.68 1.42 1.58 0.62 -0.67 -0.1 -2.38 -5.61 0.24 0.65
Zm00001d014794 (GRMZM2G300135)
-3.42 -3.9 -1.53 -0.31 -1.11 -1.3 -2.91 -2.28 -2.47 -2.91 -2.31 -0.88 -1.94 2.65 -1.68 0.09 -1.88 -0.13 0.77 2.76 -0.07 -1.7 -0.71 -0.74 -1.05 -2.25 -0.99 -1.31 -0.35 2.49 1.58 -3.39 -4.08 -1.18 -1.87 -0.54 -0.27
Zm00001d017009 (GRMZM2G088747)
-3.17 - 0.73 - 2.63 - - -2.03 - - - -2.72 -1.72 1.3 -0.87 0.95 - -3.07 0.67 - 2.06 -0.76 - 3.17 1.28 -1.6 - -0.83 - -0.65 1.75 - -5.05 -4.3 -3.56 -1.18 -
Zm00001d019554 (GRMZM2G447328)
- - - - -2.93 -2.77 - 1.82 - - - -1.58 - 3.54 -4.06 -2.15 - 1.16 0.26 2.93 -2.69 - 1.93 - -3.3 - - -0.67 - -0.49 1.33 - -3.64 -3.24 0.69 -3.2 -4.12
Zm00001d021266 (GRMZM2G104622)
- - - - -0.06 -3.73 -4.39 -3.55 - - -1.41 -1.03 - 2.66 -5.92 -0.19 -4.49 1.25 1.32 0.59 0.83 -4.11 0.91 -0.29 -0.19 - - 1.7 2.85 2.19 -3.28 -0.8 -4.12 -3.2 -8.28 -3.36 -
Zm00001d021303 (GRMZM5G879570)
-0.52 -3.8 -0.88 -0.56 1.08 -2.91 -5.44 -1.55 -2.99 -3.27 -2.52 -2.47 -3.35 2.3 -1.54 -0.23 -0.47 -0.47 0.42 -5.9 0.15 -1.46 -0.58 -0.03 0.62 -1.03 -0.82 0.78 0.16 2.07 2.69 -0.71 -0.65 0.11 -2.43 -0.89 -0.89
Zm00001d022245 (GRMZM2G318843)
0.88 -1.86 -1.31 2.15 0.89 -1.4 -3.99 -1.72 -1.01 -1.12 -4.06 -1.24 -2.23 2.08 -0.66 -1.15 -0.73 -1.39 0.81 -5.27 -0.75 -1.5 -1.2 -1.13 -0.61 -1.29 -1.18 0.95 0.74 1.68 1.44 -0.4 -2.62 -0.73 0.71 -0.38 -0.12
Zm00001d023400 (GRMZM2G159179)
- - - - -0.13 -4.77 - -0.65 - - - -2.22 - 3.87 -3.0 1.28 -5.44 -3.48 0.01 3.38 -7.49 - - - -3.0 - - 0.53 -1.28 0.99 -0.07 - -1.52 -3.14 - -2.83 -0.02
Zm00001d023413 (GRMZM2G016264)
-4.02 - - - 1.38 - - -0.99 - - - -1.85 - 3.42 -3.61 1.39 -5.44 -3.65 0.73 3.29 - - - -6.34 -1.42 -3.68 - 1.06 - 1.54 1.24 - -2.34 -3.98 - -4.3 -1.22
Zm00001d023612 (GRMZM2G171040)
- - - - - - - - - - - 0.05 - 4.38 - -2.81 - - 1.22 -1.75 - - - -0.45 - - - - - - - - -0.82 -0.54 0.99 - 3.08
Zm00001d024778 (GRMZM2G015605)
-2.67 -5.37 -2.19 -2.97 -0.06 -2.44 -2.89 -0.83 -3.66 -3.92 -3.64 -0.18 -3.97 0.99 -1.88 -0.26 -4.71 -1.54 -1.24 -6.09 -2.25 -4.49 1.38 -3.88 -1.32 1.37 -1.14 0.23 2.62 0.32 1.56 2.14 0.8 1.53 -0.55 -0.47 0.31
- - 1.79 - 0.37 1.0 - - - - - 1.77 - 4.38 -2.13 -0.37 - - 0.57 - 0.07 - - - - - - -0.24 - - - - - - - 0.69 -
Zm00001d025166 (GRMZM2G139512)
-0.59 -1.51 -0.87 -1.87 0.26 -0.01 -0.75 -0.49 -2.26 -1.68 -1.46 0.81 -0.95 2.77 -0.16 0.29 -1.49 -0.22 0.81 -5.59 0.31 -2.05 1.1 -1.68 -0.7 -0.62 -1.38 -0.13 -0.9 1.85 1.04 -2.22 -0.42 -0.46 -2.05 0.35 -0.57
Zm00001d025477 (GRMZM2G424348)
- - -4.08 -1.98 -2.09 -1.83 - -2.18 -1.14 -1.72 - -1.18 -4.07 4.6 0.64 1.64 - -2.38 -3.65 - -3.06 -1.34 - -2.99 -0.58 -0.63 - -0.18 - - -4.4 - -8.67 -2.97 -0.5 0.51 -1.23
- - - - 2.19 - - - - - - -4.04 - 4.76 - -0.55 - - - -0.68 - - - - - - - - - - - - - - - 0.39 1.43
Zm00001d025959 (GRMZM2G123450)
1.22 - -1.55 -0.88 0.31 0.91 0.22 -1.18 0.47 -0.32 -0.02 -0.08 -0.8 2.9 0.7 0.2 -4.81 -2.27 0.75 -5.21 -3.3 - -2.53 -1.4 -2.41 -1.3 0.2 -0.98 - 1.11 0.75 - -1.9 -2.83 0.64 1.14 0.37
Zm00001d027873 (GRMZM2G419938)
-1.49 -3.58 -3.34 -0.36 0.34 -0.16 -0.59 -1.08 -0.64 -1.56 -2.75 -0.78 -2.04 1.93 -0.21 -0.75 -1.48 -0.22 -0.17 -3.88 1.42 -0.1 1.39 0.19 -0.49 0.37 -1.57 0.72 2.3 -0.69 1.04 0.71 -2.18 -1.1 -3.07 -1.0 0.12
Zm00001d032116 (GRMZM2G428554)
-3.35 -2.41 -0.01 -0.24 -0.09 -2.79 -2.93 0.24 -2.03 -1.37 -1.25 -0.62 -1.84 2.81 -1.37 0.68 0.08 -0.45 1.49 -3.04 0.35 0.68 -0.17 0.69 0.42 -1.35 0.01 -0.25 -1.24 1.01 1.0 -0.23 -1.7 -0.36 -0.89 -0.96 -1.25
- - - - - - - - - - - -4.9 - 3.96 - -0.88 0.24 - -2.41 - 1.17 - - - - - - -2.35 - 2.21 3.41 - 0.03 - -1.44 - -1.42
- - - 4.36 -2.37 - 0.51 -1.5 - - - -3.73 - 2.66 -2.77 -1.59 0.39 - 1.7 - -1.85 0.46 - - - - - - - - - - -2.77 - - -3.19 0.1
Zm00001d036874 (GRMZM2G076318)
- - -2.65 0.33 -5.36 - - - - - - -0.8 - 4.19 - -1.35 - - 1.79 0.66 -4.16 - - - -4.68 - - - 3.47 - - - -2.96 - -4.56 -4.1 -
Zm00001d037360 (GRMZM2G396632)
-1.08 - 1.86 0.39 0.51 - 2.39 - - - - -0.98 - 4.1 -1.31 0.23 - -0.92 -2.9 - -2.69 - - - 0.76 -2.12 -0.67 -0.65 - - - - - -1.1 -3.45 -0.46 -1.38
Zm00001d037767 (GRMZM5G872041)
- 0.47 - - -0.4 - - - - - - -0.2 - 4.83 - -1.59 0.61 - - - - - - - - - - - - - - - -0.63 - - -1.11 1.36
Zm00001d039150 (GRMZM2G080887)
-4.39 -4.14 -2.59 -0.28 0.89 -2.32 -4.42 -0.44 - -7.1 -5.81 -1.95 - 4.15 -2.68 -0.95 -2.03 -5.1 0.47 -9.45 -0.94 -3.73 1.17 -0.01 -0.81 - -2.25 2.4 - 0.93 -3.24 - -5.85 -1.98 -2.9 -1.84 -3.06
Zm00001d039711 (GRMZM5G858165)
-0.23 -2.81 -0.82 0.22 0.4 -0.63 -1.54 -0.78 -1.62 -1.98 -0.66 -1.15 -0.72 2.22 -0.74 -0.65 -0.57 -0.18 0.68 -7.84 -0.97 -0.59 -0.14 -0.12 -0.63 2.78 -1.68 -0.76 -1.72 1.53 0.9 -4.98 -1.46 -0.35 -0.1 -0.53 -0.37
Zm00001d043673 (GRMZM2G036245)
- - - 3.37 -0.62 -0.85 - 0.22 - - - -3.39 - 3.93 - -2.01 1.72 - -0.08 -5.45 - - - - -2.58 - - -1.92 - - -1.74 - -1.08 - 1.24 -0.22 -
0.98 -0.78 -2.71 -0.71 0.46 1.71 1.74 -0.46 0.27 -0.75 0.49 0.53 -2.04 0.31 0.45 -0.95 -5.13 -0.46 1.08 -8.82 -0.27 -0.48 0.03 -4.23 0.64 1.24 -1.94 -2.02 -2.05 -1.46 -0.33 -2.62 -3.49 -1.86 0.6 0.66 1.01
- - - - 0.7 -2.27 - 1.8 - -0.51 - -0.96 - 3.38 -4.09 0.2 2.48 -0.88 -2.66 -2.41 -1.64 - - 2.22 0.37 - - -0.65 - - - - 1.27 -2.1 0.8 -3.11 -0.0
- - - - -0.35 - - - - - - -3.13 - 4.33 - 0.53 -0.71 - -0.04 -2.68 -0.87 - - - - - 2.59 2.43 - - - - -0.39 - - -3.09 -
- - - - 0.93 0.95 - - - - - -0.48 - 4.64 - 0.87 0.9 - - - -0.46 - - - - - - - - - - - 1.22 - -1.29 -1.8 -
Zm00001d047383 (GRMZM2G134886)
- - - - 0.32 - 2.41 - - - - -2.31 - 4.51 - -1.23 - - - - - - - - - - - 1.02 - - - - - - - - 2.32
Zm00001d047402 (GRMZM5G880028)
0.38 0.46 -4.08 0.66 0.35 -4.02 -7.79 -0.1 -4.25 -4.19 -4.14 -3.79 0.42 1.78 -1.96 0.49 0.02 -1.25 -1.1 - 1.59 -0.7 -2.76 0.58 0.9 -1.36 -0.94 0.54 - 0.53 3.16 -2.75 -3.22 -1.51 -0.87 -1.24 -1.3
Zm00001d049350 (GRMZM2G026724)
- - - - -2.85 - - - - - - -5.5 - 4.5 -1.66 -0.85 - 1.83 - -1.8 1.18 - - - - - - 1.03 - - - - -0.31 - -0.32 - 1.85
Zm00001d051451 (GRMZM2G000520)
- - -5.86 -2.55 2.16 -1.22 -6.4 -0.27 -4.08 -4.54 -3.2 -1.83 - 4.73 -0.38 0.5 -2.19 -4.67 -2.22 - -4.67 - - -5.58 -4.6 -1.35 - -6.76 - - -1.87 - -7.63 - -5.39 -1.66 -2.61
- - - - -0.33 - - - - - - -3.3 - 4.24 - 1.32 - 2.14 1.72 - -0.29 - - - -0.03 - - - - - 1.19 - - -0.85 - -1.04 0.87
Zm00001d052152 (GRMZM2G011110)
-2.01 -5.38 -3.81 -1.62 0.43 -1.89 -7.77 -0.25 -4.55 -4.05 -2.35 -2.68 -0.93 4.14 -0.61 -0.26 -1.08 -1.86 0.64 -8.5 0.24 -4.39 - 1.14 -2.07 -3.58 -1.52 0.6 -1.42 - 1.71 -3.27 -3.33 -1.47 -1.1 -0.3 -1.63
- - -4.52 - -1.51 -0.07 -0.99 -2.52 -5.65 -5.22 -0.06 -0.4 -4.77 1.69 -1.74 -0.12 -2.29 -5.27 0.8 -4.94 -1.56 - 2.44 -4.72 -0.12 - - 1.14 3.86 -0.6 -3.4 0.15 -4.31 -1.13 -4.76 -0.65 -2.05
Zm00001d053117 (GRMZM2G149739)
0.96 -1.8 -2.12 0.33 0.95 1.47 0.77 0.19 0.46 0.6 -1.68 -0.24 -3.48 1.01 0.22 -1.23 0.08 0.88 0.93 - 0.1 -0.21 -0.78 -0.81 0.05 0.67 -1.15 1.0 -0.48 0.02 -2.64 - -3.95 -0.06 -2.41 0.19 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.