Heatmap: Cluster_336 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
0.58 1.06 0.8 0.56 0.2 -2.07 -2.12 -0.21 -1.72 -1.98 -1.14 -1.16 0.26 0.5 -1.62 0.64 0.59 0.16 1.07 -3.57 -0.3 -0.32 -1.04 0.05 -0.02 0.71 0.63 0.56 -1.22 1.15 0.32 -3.44 -0.12 0.35 -0.52 -0.54 -0.69
Zm00001d002919 (GRMZM5G827171)
-0.18 0.44 0.41 0.97 0.0 -1.24 -0.94 -0.04 -1.52 -1.35 -0.93 -0.61 0.44 0.5 -0.7 0.34 0.66 -0.19 0.37 -2.55 -0.47 -0.36 -0.18 0.61 -0.28 0.62 0.21 0.35 -1.18 1.19 0.27 -1.66 0.03 0.68 0.03 -0.27 -0.62
Zm00001d002944 (GRMZM2G177273)
0.38 0.65 0.23 0.92 0.18 -1.6 -1.73 -0.32 -1.89 -1.68 -1.89 -0.68 0.58 0.73 -0.84 0.4 0.78 0.31 1.11 -5.39 0.33 0.31 -0.68 0.26 -0.2 -0.76 0.03 0.48 0.93 1.05 -0.79 -0.77 -0.62 -0.34 -0.28 -0.51 -0.83
Zm00001d004807 (GRMZM2G094699)
0.94 1.33 0.77 0.8 0.39 -1.75 -2.31 -1.12 -2.15 -2.15 -0.86 -0.97 0.38 -0.1 -0.52 0.3 0.54 1.28 1.24 -4.49 -0.78 -0.25 -1.18 0.31 -0.55 -0.41 0.39 0.04 -1.93 0.84 -0.45 -1.12 -0.4 0.18 0.57 -0.17 -1.05
Zm00001d006108 (GRMZM2G099780)
0.7 0.85 0.77 0.69 0.12 -1.53 -1.28 -0.51 -1.52 -1.72 -0.51 -1.0 -0.11 0.13 -1.28 0.53 0.67 -0.07 0.79 -5.93 -0.53 -0.35 -0.59 0.64 -0.55 0.25 0.33 0.5 -1.61 1.96 -0.19 -2.07 -0.57 0.13 -0.19 -0.42 -0.45
Zm00001d007388 (GRMZM2G056103)
0.15 0.74 0.56 1.1 0.15 -1.33 -1.72 -0.72 -1.82 -1.52 -1.12 -0.8 -0.15 0.13 -0.89 0.12 0.6 0.48 1.23 -5.71 -0.49 0.33 -1.34 0.33 -0.51 -0.1 0.06 0.79 0.48 0.99 0.05 -0.35 0.06 -0.06 -0.18 -0.35 -0.5
Zm00001d008233 (GRMZM2G132804)
-1.01 0.57 0.77 -0.1 0.03 -1.23 -0.8 0.1 -1.43 -1.59 0.11 -0.96 -0.01 -0.09 -1.31 0.39 1.0 0.12 0.58 -4.51 -0.28 -0.03 -0.16 0.85 0.05 0.52 0.5 0.52 -1.12 0.67 0.7 -2.93 0.4 0.62 -0.07 -0.5 -0.77
Zm00001d010047 (GRMZM2G006661)
0.49 1.21 0.74 0.18 0.06 -1.65 -0.85 -0.13 -1.89 -2.07 -0.37 -1.28 0.62 0.73 -1.13 0.6 0.54 0.11 0.85 -6.0 -0.55 -0.21 -0.66 0.86 -0.3 0.82 0.69 0.29 -2.25 0.15 0.43 -5.53 -0.33 0.13 0.22 -0.42 -0.88
Zm00001d010341 (GRMZM2G098227)
0.24 0.76 0.68 0.45 0.1 -1.44 -1.44 0.06 -1.01 -1.18 0.08 -1.05 -0.12 0.01 -1.1 0.57 0.88 0.46 1.37 -3.41 -0.25 -0.01 -1.51 0.5 -0.32 -0.04 0.16 0.52 -2.08 1.1 -0.26 -1.98 0.24 0.41 -0.43 -0.26 -0.77
Zm00001d012027 (GRMZM2G180335)
0.18 0.75 0.76 0.59 0.31 -0.99 -1.29 -0.78 -1.47 -1.49 0.06 -0.77 -0.53 0.1 -0.94 0.28 0.35 0.44 1.16 -2.02 -0.57 -1.05 -0.44 0.07 -0.5 0.79 0.36 0.4 -1.22 1.44 -0.04 -1.3 -0.04 0.59 -0.08 -0.18 -1.01
Zm00001d013075 (GRMZM2G305254)
1.23 1.71 0.76 0.8 0.65 -1.96 -1.61 -0.08 -1.47 -1.1 -0.12 -0.76 -0.29 -0.06 -1.03 0.95 1.04 0.48 -0.23 -3.58 -0.07 0.33 -0.42 0.53 -0.13 -2.33 0.53 -1.08 -1.18 0.89 -0.28 -6.4 -3.06 -1.05 0.46 -0.35 -0.73
-0.27 0.87 0.4 0.1 -0.09 -1.19 -1.44 -0.41 -0.7 -0.69 -0.61 -0.7 0.37 -0.32 -0.72 0.33 0.76 0.19 1.05 -5.63 -0.22 -0.02 -0.7 0.73 -0.36 0.61 0.39 0.8 -2.5 1.07 0.11 -1.86 0.3 0.24 -0.15 0.1 -0.78
Zm00001d013653 (GRMZM2G100246)
-0.28 0.79 0.72 0.17 -0.02 -1.46 -0.89 -0.14 -1.57 -1.21 0.44 -0.87 -0.25 0.07 -0.96 0.45 0.74 0.13 0.65 -6.7 -0.24 -0.15 -0.34 0.95 -0.25 0.06 0.08 0.4 -1.59 1.39 -0.01 -0.4 -0.28 0.65 -0.2 -0.27 -0.78
0.47 0.48 0.47 0.72 0.05 -1.0 -0.89 -0.2 -1.34 -1.24 -0.23 -0.77 0.34 0.57 -0.77 0.42 0.85 -0.0 0.64 -4.12 -0.63 -0.22 -0.34 0.74 -0.37 0.69 0.16 0.42 -2.47 1.12 -0.03 -3.43 -0.43 0.33 -0.07 -0.02 -0.46
Zm00001d017384 (GRMZM2G170061)
0.78 1.15 1.0 0.98 0.53 -1.27 -1.0 -0.89 -1.5 -1.41 -0.67 -1.17 0.01 0.65 -1.12 0.33 0.37 0.73 0.61 -4.31 -1.12 -0.04 -0.8 0.01 -0.68 0.27 0.46 0.33 -1.12 0.93 -0.26 -0.95 0.36 0.6 -1.66 -0.29 -1.15
Zm00001d018275 (GRMZM2G151237)
0.14 0.28 0.42 0.14 0.01 -1.43 -0.95 -1.01 -2.13 -2.11 -0.38 -1.03 -0.03 0.34 -1.12 0.68 0.97 0.51 1.01 -2.3 0.16 0.13 -0.8 -0.21 0.12 0.39 -0.0 0.23 -0.26 1.94 0.39 -1.51 -0.56 0.25 -0.67 -0.53 -1.09
Zm00001d018669 (GRMZM5G845755)
0.11 1.03 0.55 0.51 0.05 -1.08 -0.9 0.11 -0.98 -1.05 -1.03 -0.58 0.32 0.3 -0.55 0.45 0.74 0.13 0.44 -3.29 -0.26 -0.09 -0.33 0.58 0.21 0.06 -0.11 0.27 -3.22 1.33 0.14 -3.12 -0.11 0.52 -0.32 -0.21 -0.53
0.3 0.74 0.62 0.18 -0.08 -1.37 -1.59 -0.84 -1.23 -1.33 -0.26 -0.86 -0.53 0.1 -1.02 0.7 0.42 0.24 1.26 -4.45 -0.54 -1.01 -0.1 -0.22 -0.17 -0.21 0.6 0.5 0.43 0.57 0.66 -0.0 0.08 0.82 0.02 -0.26 -1.21
Zm00001d023784 (GRMZM2G005947)
0.9 1.04 1.73 0.2 0.52 -1.74 -1.52 -0.4 -0.9 -0.71 -0.26 -0.76 0.03 0.93 -0.45 0.34 0.13 0.0 -0.05 -2.01 -1.55 -0.89 0.16 0.6 -1.01 0.46 0.84 0.32 - 0.23 -0.44 -1.63 -0.26 0.17 -0.58 -0.25 -0.29
Zm00001d025232 (GRMZM2G426275)
0.72 1.5 0.73 0.31 0.53 -1.93 -2.27 -0.49 -1.56 -1.45 -0.02 -0.83 -0.12 0.34 -0.75 0.58 0.51 -0.07 0.51 -7.67 -0.45 -0.5 0.11 0.52 -0.24 0.4 0.45 -0.39 -0.76 0.95 0.2 -1.45 -1.12 -0.12 0.8 -0.31 -1.15
Zm00001d026607 (GRMZM2G040876)
0.47 1.45 0.51 1.18 0.4 -2.05 -2.09 -0.2 -1.75 -1.46 -1.29 -0.7 -0.91 0.34 -0.49 0.47 0.67 0.28 1.55 -6.26 -0.07 0.38 -0.56 -0.5 -0.97 0.08 0.09 0.11 -1.06 1.25 -0.35 -3.79 -0.76 -1.13 0.81 -0.42 -0.78
Zm00001d026689 (GRMZM2G110932)
-0.53 1.08 -0.3 -0.76 -0.22 -1.15 -1.69 0.44 -0.63 -0.42 -0.22 -0.69 0.29 -0.05 -0.45 0.55 1.3 0.24 1.37 -3.18 0.02 0.31 -1.21 1.12 0.49 -0.61 0.24 -0.34 - 0.57 0.05 -3.03 -1.51 -0.45 1.13 -0.23 -0.87
Zm00001d028227 (GRMZM2G163129)
0.55 0.97 0.53 1.13 0.26 -1.52 -1.86 -1.04 -2.48 -2.14 -1.61 -0.82 -0.48 0.7 -0.77 0.07 0.05 0.55 1.15 -4.71 -0.48 -0.12 -0.69 0.07 -0.7 -0.34 0.37 0.56 0.97 1.2 -0.07 -0.22 -0.18 -0.14 0.02 -0.68 -0.69
Zm00001d029878 (GRMZM2G428071)
0.29 0.7 0.38 0.58 -0.22 -2.36 -1.91 -0.4 -2.56 -2.97 -1.22 -1.22 0.68 0.31 -0.98 0.38 0.49 0.22 1.23 -7.41 -0.31 -0.14 -1.07 0.25 -0.17 0.84 -0.21 0.35 0.53 1.39 -0.2 -1.09 -0.56 0.24 1.01 -0.58 -1.29
Zm00001d030579 (GRMZM2G152526)
-0.21 0.61 0.07 0.17 0.02 -0.68 -0.45 0.32 -1.34 -1.2 -0.03 -0.54 0.65 -0.63 -0.59 0.27 1.06 0.07 0.68 -5.65 0.42 -0.03 0.14 0.96 -0.04 0.36 0.38 -0.41 -2.64 0.61 0.19 -4.13 -1.37 -0.39 1.19 -0.27 -0.6
Zm00001d031712 (GRMZM2G019050)
-0.32 0.67 0.61 0.61 0.06 -1.03 -1.11 -0.09 -1.2 -0.95 -0.1 -0.86 -0.35 -0.2 -1.05 0.42 0.91 0.18 0.57 -4.13 -0.57 -0.3 -0.63 0.52 -0.37 0.19 0.21 0.64 -2.7 1.62 0.21 -2.03 0.22 0.73 -0.2 -0.0 -0.65
Zm00001d032078 (GRMZM2G448258)
-0.12 0.68 0.03 0.5 0.05 -1.76 -1.5 -0.45 -1.46 -1.61 -0.43 -1.05 -0.47 -0.28 -1.17 0.47 0.82 -0.17 0.95 -6.9 0.09 -0.51 -0.41 0.35 -0.06 0.76 -0.0 0.75 -0.97 1.07 0.34 -0.14 0.45 0.82 0.57 -0.47 -0.98
Zm00001d033502 (GRMZM2G093855)
0.52 0.66 1.22 -0.13 -0.13 -1.25 -1.31 -0.48 -1.29 -1.43 -1.21 -1.17 0.11 -0.01 -0.91 0.51 0.52 0.79 1.03 -2.91 -0.59 -0.61 -0.16 0.26 -0.2 -0.04 0.02 0.33 0.01 1.13 0.07 -1.59 -0.28 0.79 0.33 -0.16 -1.15
Zm00001d033932 (GRMZM2G133652)
-0.4 0.63 0.2 0.12 -0.06 -1.36 -1.43 -0.19 -1.29 -1.46 -0.34 -0.67 -0.42 -0.24 -0.84 0.45 0.69 0.33 0.8 -3.89 -0.15 -0.16 0.27 0.65 -0.15 0.63 0.12 0.22 -0.95 0.87 0.39 -1.17 -0.31 0.5 1.19 -0.09 -0.6
Zm00001d034701 (GRMZM2G479744)
0.22 0.8 0.73 0.89 -0.06 -1.16 -1.16 -0.46 -1.83 -1.28 -0.48 -1.01 -0.71 -0.44 -0.87 0.01 0.62 0.51 1.67 -4.32 -1.15 -0.15 -0.45 0.38 -0.79 -0.53 0.49 0.69 1.13 0.6 -0.23 -0.96 -0.24 0.08 -0.16 -0.18 -0.78
Zm00001d034915 (GRMZM2G056916)
0.14 0.78 0.43 0.34 0.01 -1.96 -2.29 -0.31 -1.71 -1.71 -2.24 -1.18 0.01 0.55 -1.08 0.2 0.31 0.33 0.85 -4.57 -0.36 0.65 -1.15 0.37 -0.35 0.31 -0.01 0.34 0.3 1.01 1.04 -0.03 -0.42 0.11 1.04 -0.89 -1.01
Zm00001d037265 (GRMZM2G054070)
1.58 2.02 1.18 1.35 0.94 -2.41 -2.7 -0.61 -2.14 -2.64 -1.49 -1.92 -0.31 0.17 -1.29 0.82 0.56 0.26 -0.01 -0.94 -0.85 -0.5 -2.9 0.07 -0.8 -1.12 0.96 -0.54 -1.8 1.07 0.08 -2.99 -1.53 -0.28 -0.29 -0.42 -0.97
Zm00001d037446 (GRMZM2G341027)
-0.52 0.19 0.77 0.85 0.23 -1.61 -2.15 0.09 -1.93 -1.9 -0.97 -0.58 0.23 1.21 -1.04 0.5 0.62 -0.14 0.16 -3.95 -0.23 0.28 -0.94 0.88 -0.18 0.56 0.29 -0.01 -2.32 1.46 0.43 -3.28 -0.61 0.47 0.17 -0.37 -0.35
Zm00001d038082 (GRMZM2G055020)
0.39 0.68 0.8 0.7 0.39 -1.85 -2.03 -0.56 -1.88 -2.09 -1.3 -1.43 -0.21 0.21 -1.15 0.46 0.69 0.41 1.13 -4.28 0.02 -0.7 -1.34 0.11 -0.29 0.43 0.17 0.46 0.22 1.26 -0.36 -0.7 -0.02 0.36 0.74 -0.55 -0.86
Zm00001d038689 (GRMZM2G176396)
-0.17 0.23 0.48 -0.2 0.02 -1.81 -2.42 -0.7 -1.56 -1.89 -1.8 -1.2 0.72 0.02 -0.56 0.31 -0.09 0.43 1.44 -2.27 0.12 -0.06 -0.94 0.16 0.14 0.39 0.85 0.47 -0.26 0.93 0.73 0.18 0.06 0.58 -0.11 -0.49 -1.15
Zm00001d038804 (GRMZM2G060611)
0.85 1.48 0.34 0.5 0.15 -1.99 -1.84 -0.45 -1.56 -1.22 -0.54 -0.77 0.19 -0.21 -0.98 0.23 0.47 0.65 1.37 -5.94 -0.49 -0.62 0.04 0.19 -0.25 -0.12 0.09 0.66 0.11 0.44 -0.48 -2.0 0.29 0.43 -0.45 -0.3 -0.76
Zm00001d040941 (GRMZM2G156033)
0.74 1.46 0.75 1.31 0.4 -1.52 -1.51 -0.6 -1.71 -1.72 -0.85 -0.68 -0.54 0.11 -1.14 0.55 0.56 -0.41 0.94 -5.94 -0.15 -0.53 -0.29 0.2 0.1 -0.31 0.87 -0.16 -0.56 0.72 0.36 -2.52 -0.87 -0.12 0.34 -0.43 -0.6
Zm00001d042028 (GRMZM2G179421)
-0.47 -0.37 1.1 0.75 -0.32 -1.14 -1.47 0.08 -1.43 -1.29 0.23 -1.25 -0.18 0.79 -1.0 0.35 0.76 0.73 0.48 -5.75 -0.94 0.22 -0.06 1.18 -0.65 1.39 0.07 -0.15 -3.04 0.83 -0.03 -3.78 -0.79 0.08 0.25 0.05 -0.87
Zm00001d042398 (GRMZM2G133173)
0.31 1.29 0.56 0.57 -0.0 -2.66 -2.84 -0.69 -2.61 -2.49 -1.73 -1.45 -0.16 0.12 -1.35 0.38 0.72 0.6 1.47 -5.45 -0.2 -0.02 -1.33 0.42 -0.31 0.11 0.36 0.51 1.08 1.27 -0.16 -1.34 -0.43 0.25 -0.05 -0.83 -1.56
Zm00001d042464 (GRMZM2G177198)
0.66 1.04 0.7 0.62 0.14 -2.64 -2.36 -0.7 -2.28 -2.49 -1.9 -1.54 -0.56 1.07 -1.43 1.03 0.5 0.08 0.14 -6.04 -0.25 -0.28 -1.86 0.2 -0.53 0.15 0.84 0.55 -2.13 1.11 0.08 -2.0 0.45 0.98 0.51 -0.63 0.15
Zm00001d042820 (GRMZM2G076688)
0.39 0.67 0.74 -0.28 -0.05 -2.42 -2.33 -0.59 -1.25 -1.74 -2.11 -1.2 0.61 0.28 -0.53 0.76 0.8 0.67 0.8 -2.91 0.16 -0.35 -2.02 0.33 0.15 -0.77 0.0 0.34 1.24 0.54 0.11 0.03 0.16 0.22 0.01 -0.53 -0.78
Zm00001d047241 (GRMZM2G104676)
0.42 0.97 0.47 -0.04 0.09 -3.49 -2.97 -0.9 -2.61 -2.95 -1.91 -1.54 -0.17 0.48 -1.43 0.74 0.62 0.79 0.7 -2.18 0.23 -0.33 -1.37 0.11 -0.11 0.32 0.17 0.42 0.41 1.23 0.32 -0.59 0.23 0.8 0.62 -0.65 -1.18
Zm00001d047439 (GRMZM2G108384)
0.46 0.93 0.8 0.72 0.59 -1.16 -1.34 -0.63 -1.31 -1.14 -0.16 -0.72 -0.72 0.38 -0.77 0.47 0.34 0.1 0.41 -4.13 -0.26 -0.54 -0.39 0.17 -0.17 0.23 0.52 0.19 -1.27 1.15 0.13 -1.36 -0.35 0.54 0.46 -0.18 -0.5
Zm00001d048080 (GRMZM2G034575)
0.56 1.05 0.15 0.91 0.17 -2.04 -2.9 -0.91 -2.1 -1.99 -1.35 -0.91 0.24 0.85 -0.72 0.12 0.21 0.28 1.05 -5.02 -0.29 -0.51 -0.67 0.09 -0.72 -0.23 -0.08 0.2 1.31 1.35 -0.27 -0.36 -0.47 -0.25 0.66 -0.5 -0.73
Zm00001d048320 (GRMZM2G178916)
0.84 0.9 0.74 0.95 0.27 -1.68 -1.8 -0.89 -1.06 -1.61 -1.33 -0.77 0.15 0.2 -0.54 0.36 0.42 1.08 1.01 -3.58 -0.37 -0.07 -1.25 0.19 0.02 -0.01 0.27 -0.07 -2.35 0.96 -0.34 -1.65 -0.82 -0.31 1.14 -0.06 -0.77
Zm00001d049210 (GRMZM2G050649)
0.19 0.75 0.58 0.85 -0.13 -1.52 -1.69 -0.38 -1.98 -1.77 -1.32 -1.3 -0.02 0.26 -1.11 0.51 0.7 0.28 1.05 -4.07 -0.4 -0.32 -1.02 0.34 -0.48 0.07 -0.01 0.44 -0.13 2.08 0.16 -2.31 -0.55 0.34 -0.07 -0.45 -0.72
Zm00001d049522 (GRMZM2G052670)
0.54 0.6 0.76 0.58 0.17 -0.97 -0.49 -0.64 -1.07 -0.72 -0.25 -0.57 -0.26 -0.36 -0.74 0.31 0.39 0.59 1.62 -3.76 -0.78 -0.29 -0.59 -0.15 -0.48 -0.23 0.26 0.44 -0.73 1.03 0.04 -0.69 0.04 0.24 -0.42 -0.11 -0.76
Zm00001d049873 (GRMZM2G107289)
0.32 0.38 0.37 0.42 0.19 -1.07 -1.22 -0.27 -1.26 -1.43 -0.93 -0.79 0.29 0.8 -0.82 0.52 0.85 0.18 1.16 -4.23 0.35 0.35 -0.86 0.55 0.1 0.12 0.09 -0.05 -0.98 1.22 -0.15 -2.36 -1.41 0.07 0.03 -0.26 -0.18
Zm00001d051268 (GRMZM2G111015)
0.24 1.01 1.09 0.84 0.63 -1.16 -0.98 -0.47 -1.06 -1.04 -0.32 -0.77 0.07 0.47 -0.82 0.26 0.29 0.17 0.26 -4.28 -1.14 0.04 -0.16 0.2 -0.61 0.96 0.45 0.25 -2.93 0.62 -0.51 0.07 0.23 0.31 -0.92 -0.19 -0.81
Zm00001d051457 (GRMZM5G813909)
0.05 0.96 0.49 0.87 0.19 -1.85 -1.73 -0.28 -1.7 -1.92 -2.06 -1.02 0.29 0.03 -1.31 0.38 0.95 -0.03 1.28 -7.31 -0.13 -0.64 -0.9 0.25 -0.28 -0.49 0.12 0.85 1.31 1.07 -0.7 -0.32 0.04 0.24 -0.65 -0.56 -1.25
0.31 0.84 0.22 0.76 0.1 -1.13 -1.39 -0.26 -2.12 -2.03 -0.92 -0.94 -0.06 -0.03 -1.04 0.52 0.6 0.47 0.92 -4.02 -0.18 -0.08 -1.59 0.54 0.05 0.35 -0.06 0.43 0.43 0.77 0.19 -0.68 -0.06 0.05 0.7 -0.37 -0.55
Zm00001d054106 (GRMZM2G134889)
0.47 1.19 0.02 0.9 0.47 -3.13 -3.39 -0.52 -2.45 -2.5 -2.38 -1.51 0.13 1.15 -1.17 0.71 0.3 0.16 1.81 -7.41 -0.25 -0.21 -1.32 0.43 -0.46 -0.59 0.28 0.75 -0.63 -0.05 0.38 -0.05 0.24 0.77 -1.22 -0.77 -1.08

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.