Heatmap: Cluster_103 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d004401 (GRMZM2G045809)
-4.5 -4.62 -4.1 3.29 1.93 -7.77 -7.16 - -10.64 -9.91 -4.7 -5.0 - -5.5 0.45 -5.79 - 0.99 -6.59 -5.25 -7.33 -6.92 -0.88 -11.37 -1.01 -6.3 -1.24 2.97 0.07 - -5.45 -0.03 -0.11 2.35 -3.02 -0.82 0.7
Zm00001d006612 (GRMZM2G418343)
- - -5.06 -5.54 -7.82 - - - -1.88 -3.97 - -0.19 -3.28 -2.85 2.6 -5.45 -8.63 1.42 1.78 -7.94 -5.6 -3.08 - -8.94 -4.22 -4.33 -0.88 1.28 1.4 - -1.17 3.07 0.73 0.9 0.2 1.82 -1.46
- - - - -8.69 - - - - - - -9.27 - - - - - - - -1.97 - - - - - - 1.52 3.02 - - - 3.97 2.48 2.16 - - -
Zm00001d007299 (GRMZM2G081464)
- - - - -10.45 -10.24 -9.68 - - - - -3.51 - - -11.44 -6.75 - -9.48 -12.89 -10.6 -8.98 - -4.82 -10.27 -7.07 - -4.69 0.83 1.8 - 1.32 4.63 0.48 1.54 - -11.03 -
Zm00001d007850 (GRMZM5G803888)
- - - - 1.59 - - - - - - -0.38 - - -1.57 -3.53 - - - -2.62 -1.37 - 4.65 - -1.69 - 2.33 -3.22 - - - - - -1.68 -3.55 -1.16 -0.31
Zm00001d009167 (GRMZM2G098912)
1.28 2.48 -0.63 2.38 2.32 - - -2.26 - - - -3.62 - - -3.64 -1.61 -1.89 -0.18 -0.08 -3.94 -3.87 -1.77 - -4.74 -2.58 - 2.99 1.01 - - -2.16 - 1.41 -0.57 -1.35 -1.28 -1.18
- - - - - - - - - - - -2.11 - - - -2.91 - - - - - - - - - - - - - - - - 4.44 3.83 -1.63 -1.34 -
Zm00001d011368 (GRMZM2G147714)
- - 4.35 - -1.39 - - - - - - - - - - 0.58 - - 2.85 - 2.92 - - - - - - - - - - - - - - - -
Zm00001d012152 (GRMZM5G812425)
- - - - -2.12 3.04 0.59 0.01 -0.17 2.02 1.3 -0.19 - -1.94 1.6 -3.87 - 1.41 -2.74 - -0.86 - - -2.26 - - - 1.57 - - -2.25 0.34 1.37 -1.64 -5.04 0.79 0.78
Zm00001d012383 (GRMZM2G045239)
- -6.68 -2.9 -1.74 -3.58 -4.13 2.17 -6.17 -2.98 -4.42 -0.9 -0.6 - - -3.8 -2.74 -3.77 -3.14 -1.15 -3.19 -4.14 - -1.28 -5.37 -2.78 - 0.37 3.6 - - -2.22 2.68 1.71 2.23 -3.82 -2.74 -0.44
-3.59 - -0.84 - -0.47 - - - - -1.36 -2.08 -4.42 -0.42 1.69 -5.01 1.0 -3.67 -1.94 -2.02 -2.96 0.22 -2.01 - -4.23 -1.83 - -0.79 2.57 - 1.63 -3.49 3.32 1.29 1.89 -2.55 -2.36 -1.47
Zm00001d017208 (GRMZM2G097015)
-6.35 -0.95 -0.73 -2.1 -1.13 -0.65 -1.59 -1.21 0.19 0.4 -0.7 0.33 -3.36 1.28 -1.05 1.65 -2.51 -2.31 -0.47 -4.15 2.12 1.11 -2.01 -2.47 -0.17 -3.47 0.69 -1.42 - 1.33 1.8 - -2.24 1.15 0.34 0.44 0.26
Zm00001d019725 (GRMZM2G027198)
-5.06 -7.21 -4.22 -2.24 1.77 -0.17 -2.78 -1.62 -1.4 -2.91 -3.24 0.53 -6.63 -0.48 -0.27 -2.92 -4.89 -1.74 0.05 -8.29 -3.28 - 2.43 -4.83 -2.24 -3.2 0.18 1.37 2.64 -1.79 1.82 0.6 0.25 -0.0 -2.29 0.45 0.91
- - - - - - - - - - - - - - - -0.44 - - - 2.91 - - - - - - - 3.51 - - - - 4.12 - - - -
- - - - - - - - - - - 1.89 - - - -0.44 - - - - - - - - 5.03 - - - - - - - - - - - -
Zm00001d023228 (GRMZM2G173742)
-1.85 -4.86 -2.18 -1.64 2.12 -0.08 0.16 -2.59 -1.11 -0.03 0.66 1.14 -2.7 0.02 0.06 -1.24 -1.57 -0.83 -3.67 -6.11 -3.3 - 2.11 0.01 -1.71 - 0.97 0.8 - - 1.75 1.01 -0.74 0.65 -0.3 0.76 0.3
Zm00001d023404 (GRMZM2G434170)
-4.87 - -2.93 -0.71 0.86 -3.56 -5.11 - -3.04 -3.6 -2.24 -0.98 - -4.76 -2.88 -4.87 -6.16 -0.86 1.05 - -5.98 - -2.62 -4.38 -2.79 -3.88 -3.2 2.28 - -1.31 2.52 1.42 3.4 2.42 -4.92 -1.73 -3.28
Zm00001d024711 (GRMZM2G439268)
-1.69 -1.51 -0.41 - -2.48 - -6.86 -2.03 -2.95 -0.78 -3.79 -2.9 -3.22 - -1.26 -2.25 -1.95 -1.15 -1.99 -4.57 -6.83 - -2.49 0.18 -2.05 - 3.56 2.26 - - 2.77 1.51 1.44 0.63 -4.68 -1.33 -5.41
Zm00001d024753 (GRMZM2G177792)
-7.23 - 1.45 2.34 1.86 - -6.97 - -3.75 -4.85 - -4.75 - -5.18 -4.08 -6.03 - -2.65 -4.05 -8.1 -10.06 - - - -4.6 - 1.68 2.51 - -4.2 2.52 1.93 1.16 1.98 -2.62 -2.85 -4.27
Zm00001d024771 (GRMZM2G109142)
-8.93 -1.96 -8.33 -0.72 -0.75 -5.6 -4.62 -2.63 - -8.01 -4.62 -3.33 - -2.79 -0.77 -3.33 -2.17 -2.03 -2.77 -5.82 -1.9 -6.34 - -3.2 -3.46 -0.23 1.49 0.47 0.35 -5.0 1.97 4.17 -0.87 0.58 1.28 -1.63 -2.5
Zm00001d025565 (GRMZM2G135608)
-2.73 1.42 -4.17 0.8 -2.28 -4.96 - - - - - -5.78 -2.29 - -2.13 0.86 1.52 1.07 -3.82 -6.68 - -2.67 - 2.74 1.51 - -1.86 2.08 - - 0.66 - 2.56 1.26 -1.76 -4.64 -1.24
Zm00001d025684 (GRMZM2G111770)
- -5.65 -4.58 -0.83 -2.5 -2.67 -0.49 -2.58 - - -1.39 -2.83 -2.49 -1.65 -3.69 -2.22 -1.21 -3.37 -3.02 -4.72 -3.31 - -0.09 -4.88 -5.04 -2.06 - 0.55 - - 2.07 4.42 1.15 0.28 -1.05 -0.67 -1.9
-3.41 - -2.88 1.16 1.29 -0.33 -0.51 -0.11 -1.4 -2.36 1.94 0.04 -2.73 0.57 -0.93 -1.97 -1.78 -0.48 -0.41 - -4.3 -0.78 2.77 - 2.08 -2.61 -2.3 -0.22 - -0.17 -1.7 - -2.5 0.23 1.74 -0.2 -1.36
- - - - -1.13 - -2.31 - - - - -2.22 - - - -0.52 - - - -2.06 - - - - - - -0.7 2.81 - - 0.13 3.66 3.17 2.28 - - -
Zm00001d029858 (GRMZM2G351505)
- - - -3.44 - - - - - - - -9.6 - - - -11.31 - - -6.79 - - - - - -5.95 - - 3.21 1.82 - -5.41 0.26 0.36 4.43 - -8.64 -
- - - - - - - - - - - -1.66 - - - -1.92 - - - 0.65 - - - - - 4.6 - 2.43 - - - - 2.36 - - - -
Zm00001d031704 (GRMZM2G051795)
- - - - -1.38 - - - - - - -5.57 - - - -2.39 - 2.02 1.93 -1.72 -0.09 - - - -0.14 - - 1.54 4.15 - -0.66 - 1.48 1.12 - -2.53 -
Zm00001d032904 (GRMZM2G000536)
- - - - -2.62 - -0.38 -0.24 -3.03 -3.3 - -0.99 - - -3.85 -3.62 - - -5.22 -2.23 -3.12 - 2.3 - - - - -1.33 3.33 - 3.2 2.61 -2.15 0.43 -1.39 -0.43 -0.62
Zm00001d032927 (GRMZM2G453739)
- -1.63 - 1.64 -0.3 - - 0.47 - - - -3.03 - 0.29 - 1.57 - 1.39 1.13 - 1.3 - - 1.82 -0.05 - -0.48 0.09 - - 3.44 - -0.58 0.89 - -3.3 -
- 4.18 - - - - - - - - - - - - - -2.67 - - - 3.12 2.21 - - - - - - 2.42 - - - - - - - - -
Zm00001d034786 (GRMZM2G470382)
- - - - - - - - - - - 2.81 - - - - - - - - - - - - - - - - - - - - - - 4.91 - -
Zm00001d035300 (GRMZM2G050561)
0.95 1.04 -1.44 0.72 -0.02 -0.54 0.64 -3.64 0.15 -0.47 - -0.05 -0.43 -0.1 1.68 -3.44 - 1.58 -1.55 -8.21 -3.05 -1.58 - - 0.72 - -0.47 0.16 -1.23 - -7.35 -2.38 -0.47 2.34 1.54 1.42 -0.68
Zm00001d036026 (GRMZM2G041171)
- - -2.03 - -0.19 - -2.85 - - - 0.19 -1.47 - - - 0.41 - - -2.0 -5.05 0.54 - - - - 1.0 1.58 3.12 - - - 1.77 2.79 2.64 -6.37 -2.74 -0.42
Zm00001d036238 (GRMZM5G873767)
- - - - -4.19 - - - - - - -6.19 - - -3.74 -11.62 - - - - -7.84 - - - - - - 3.23 - - 0.11 3.45 2.88 3.0 - -9.51 -4.26
Zm00001d037766 (GRMZM5G813363)
-2.85 -3.01 -0.21 -0.65 0.59 -3.23 -3.11 -1.63 -2.89 -4.28 -2.14 -2.05 0.68 1.66 -1.44 2.11 -0.76 0.41 1.48 -4.66 -0.49 -2.26 -5.67 -1.59 -1.3 0.05 1.89 -0.21 - -1.85 2.13 -1.19 -1.5 1.93 -2.01 -1.06 0.1
- - - 1.73 -5.56 -1.98 - - - - - -3.6 - - - -1.8 1.71 - - -2.35 - -1.41 - - - 0.59 - 2.22 3.23 - -3.07 1.38 1.72 2.34 0.78 -1.19 -1.21
- - -2.19 1.28 -1.67 - - -3.28 - - - -1.77 - - - -1.15 - - 0.1 -1.23 -5.91 - - - -4.81 2.31 -1.33 2.5 - 0.27 -1.11 3.32 2.3 1.95 -4.39 -4.22 -3.08
-3.42 - 2.53 - 1.76 - - -0.94 1.65 2.04 - -1.92 - - -0.31 -4.6 - -2.21 - - - - - - - - - 2.37 - - -0.58 2.82 1.56 -0.72 -1.82 0.94 -
Zm00001d043716 (GRMZM2G107754)
- - - - - - - - - - - -10.26 - - - -12.77 - -5.93 -5.57 - - - - - - - - 1.54 2.62 - -6.69 4.49 1.87 0.76 - - -7.41
Zm00001d044177 (GRMZM5G814803)
- - -0.66 - -3.21 - - - - - - -1.71 - - - -2.59 - - -1.03 - -3.09 - - - - - 1.35 -0.03 - - 3.91 - 2.88 3.2 - - -
Zm00001d045264 (GRMZM2G071249)
-2.88 -5.45 -0.81 -6.09 -2.27 -3.78 -3.78 -3.28 -3.61 -5.41 -4.1 -2.48 0.16 1.67 -2.79 0.7 -2.42 -0.62 1.14 -7.31 -0.71 -1.2 0.12 -2.63 -0.04 -3.15 -0.36 0.44 1.63 -6.22 1.26 3.44 0.03 1.57 -2.63 -1.94 -3.2
- - - - - - 0.36 - - - - -4.29 - - - -5.41 1.4 - - -1.37 - - - - - - - 2.2 - - - 3.86 2.18 3.11 -2.1 -3.14 -
Zm00001d047261 (GRMZM2G007252)
- - - - - - -9.6 - - - - -9.07 - - -6.95 -11.12 - - -9.81 -8.48 -10.62 - - - - -6.28 -2.07 2.48 - - 0.66 - 2.36 4.57 -0.57 -5.25 -7.92
Zm00001d048370 (GRMZM2G057514)
- - -3.46 - -3.26 -0.8 -2.37 -3.15 -0.0 -0.64 -2.5 -0.69 -2.94 -4.01 -0.5 -1.7 -5.17 1.34 -8.49 -4.62 -6.01 -3.73 2.67 -7.07 -0.66 3.38 1.76 1.58 0.2 - -3.57 -3.47 -1.94 1.54 -2.38 -0.9 -0.86
Zm00001d048649 (GRMZM2G131409)
-8.13 - - - -6.17 -6.97 - -2.15 - - - -6.42 1.24 -0.2 -3.26 -1.31 -4.23 -1.47 -4.6 - -2.22 -0.77 - -5.43 -0.51 -3.23 3.59 0.62 - -6.41 1.01 0.26 2.1 3.2 -2.71 -1.72 -2.58
Zm00001d048806 (GRMZM2G088365)
- - - - -14.25 - - - - - - -12.61 - - - -14.79 - - - - - - - - - - - 3.51 - - -6.83 -5.63 4.08 3.11 - -10.33 -10.04
Zm00001d049834 (GRMZM2G071575)
-8.33 -9.47 -5.85 -6.56 -5.73 -3.06 -5.82 -2.67 -3.23 -3.25 -5.96 -3.32 -2.53 -2.24 -1.39 -3.6 -2.13 -1.11 -0.69 -5.35 -0.55 -0.94 - -1.04 -1.82 -0.43 1.31 0.0 0.92 -0.44 3.0 3.79 -0.03 0.57 -2.43 -1.09 -1.39
Zm00001d049889 (GRMZM2G156737)
- - - - -3.96 - - - - - - -9.43 - - - -7.74 - - -7.56 -3.78 -4.33 - - -1.74 - - - 1.18 - -2.22 1.97 4.58 1.2 1.89 - -4.39 -3.01
- - - - -3.79 - - - 1.1 - - -3.31 - - - -0.78 - - - - - - - - - - - 2.6 - - - 3.73 2.94 2.67 -0.69 -3.55 -
Zm00001d051956 (GRMZM2G140901)
- -5.93 - 1.84 0.2 -3.3 -2.57 -2.51 -2.04 -2.8 -4.41 -1.72 - 1.99 2.57 -3.58 - 1.89 0.52 -2.52 -0.25 0.16 1.49 -2.71 -0.1 - - 0.04 1.97 - - 1.85 -3.01 -1.5 -4.84 -0.69 -1.93
- - - - - - - - - - - 3.12 - - - - - - - - - - - - - - - 4.82 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.