Heatmap: Cluster_131 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d000303 (GRMZM2G166041)
- - - - -0.1 - - - - -3.86 - -1.83 - - -3.81 -4.88 -3.85 -2.37 0.18 -5.2 -3.86 - - -1.15 -2.97 - -0.81 -1.63 - - 4.78 - 0.32 1.9 -5.94 -2.16 -
Zm00001d002768 (GRMZM2G337229)
-11.12 -11.11 - - -10.66 - - - - - - -10.17 - - -11.17 -11.33 -9.34 -4.51 -4.11 -10.5 -12.05 -6.86 - -5.81 -8.3 -12.78 -1.8 0.99 -4.17 - 4.93 -0.0 1.06 0.05 -10.9 -10.16 -12.71
Zm00001d002952 (GRMZM2G039845)
-6.23 - - - -4.59 -3.53 -3.23 -4.52 - - - -4.64 - - -7.28 -2.89 -6.32 -7.75 -2.85 -6.34 -3.09 -4.66 - -5.06 -3.99 -2.83 -1.67 0.48 -2.78 -3.82 4.88 -0.03 0.76 0.61 -5.05 -3.61 -2.41
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.21 - - - - - -
Zm00001d003631 (GRMZM2G305311)
-4.89 - - 0.56 -2.59 0.98 0.23 -1.97 -3.06 -1.84 -2.5 -1.36 -1.29 1.87 -1.65 -0.16 -2.93 -0.03 -1.89 - -0.51 1.45 -3.6 0.36 1.63 -1.44 - -0.4 - -0.85 3.47 1.0 -1.68 -1.34 -1.66 -1.51 -1.86
Zm00001d008446 (GRMZM2G021614)
- - - - -10.72 - - - - - - -7.9 - - - -12.73 -7.51 - - -7.03 -9.33 - - -5.35 -8.01 - -4.25 0.34 - - 5.02 - 0.09 1.09 -10.67 - -
- - - - - - - - - - - -0.11 - - - -0.48 - - - - - - - - - - 3.9 - - - 4.35 - - - - - -
Zm00001d010785 (GRMZM2G135381)
-0.8 1.02 -2.92 1.03 -0.35 -2.55 -1.87 -0.26 -2.02 -1.48 -4.6 -1.43 0.2 1.48 -0.28 -0.84 -0.75 1.88 -0.87 -3.97 0.76 -1.35 -3.96 0.53 0.07 0.59 0.02 -1.4 -1.64 -2.61 2.93 -1.95 -1.76 -0.27 -1.57 -0.41 -0.34
Zm00001d011365 (GRMZM2G034197)
0.77 -0.59 -5.08 1.3 -0.01 -2.71 -5.13 -1.77 -3.08 -1.88 -3.54 -1.44 -1.32 -1.19 0.44 -0.88 -1.21 0.01 -0.01 -3.17 0.96 -0.81 -1.3 1.88 -0.02 0.32 -1.4 0.01 -1.19 -0.6 3.1 -0.36 -0.53 -0.62 -0.92 0.12 -0.13
Zm00001d011396 (GRMZM2G074735)
-1.62 -1.42 -0.04 -1.13 0.38 -0.14 -0.22 0.79 -0.98 -0.93 0.48 0.53 -0.37 0.97 -0.05 0.43 -0.04 -0.89 -0.3 -7.87 0.02 -1.24 1.25 -0.79 -0.1 -0.5 -0.43 -0.24 0.44 -1.0 1.86 -0.45 -0.77 0.4 0.33 0.05 -0.31
-11.14 - - -9.37 -9.73 - - -2.81 - - - -10.26 - - -15.59 -5.83 -7.48 -8.04 -8.72 -10.43 -3.14 -6.29 - -3.29 -5.15 - -0.29 0.97 -4.12 - 4.96 -0.97 0.28 -0.05 -12.62 -9.71 -7.75
Zm00001d014205 (GRMZM2G176390)
- - - - -9.43 - - -5.67 - - - -9.72 - - -8.27 -9.09 -3.71 -6.22 -7.39 - -0.91 -5.58 - -2.88 -3.39 -1.9 2.09 -0.01 - - 4.79 -2.92 0.67 0.2 - -9.29 -
Zm00001d014608 (GRMZM2G080183)
-1.98 -5.18 -0.44 -0.77 1.19 -2.44 -2.87 -0.88 -2.87 -2.58 -2.8 -1.8 -2.05 0.38 0.43 0.3 -1.54 -0.77 0.01 -7.9 0.03 -2.16 -3.61 -0.83 -1.21 -0.05 2.25 0.2 - -5.33 3.64 -1.02 -1.46 -0.65 -1.64 0.06 -0.11
Zm00001d016567 (GRMZM2G124026)
-1.56 -1.07 -1.61 0.16 -0.0 -2.99 -2.38 -1.76 -3.4 -4.58 -4.43 -2.52 -3.57 -1.3 -1.88 -0.79 -3.66 -0.65 1.39 -11.16 -1.87 -2.74 -1.26 -1.01 -2.36 -2.76 -0.87 0.55 2.39 -1.63 2.45 2.83 2.0 0.79 -4.44 -2.8 -1.56
Zm00001d017466 (GRMZM2G057386)
-6.14 -2.03 -7.05 - -2.37 0.3 0.67 - -2.2 -1.04 0.05 -1.32 -3.69 -5.76 -0.31 -2.26 - -2.19 -5.18 -5.76 -2.44 - -1.96 -4.36 -1.8 0.81 3.08 -0.12 1.53 -3.72 3.3 -1.13 -1.4 1.5 -3.43 -0.17 -0.3
Zm00001d019271 (GRMZM2G129092)
- - - - -4.6 - - - - - - -5.12 - - -2.81 0.02 - - - - - - - - -2.59 -0.54 3.24 -2.28 - - 4.41 - - 1.91 - -4.95 -2.31
Zm00001d019274 (GRMZM2G343236)
- - - - -5.79 - - -1.35 - - - -6.1 -2.2 - -4.18 -2.18 -4.58 -1.57 -0.02 - - 2.62 - 1.4 2.78 -0.4 2.77 -5.78 - - 3.19 0.18 -2.76 0.06 -5.99 -7.21 -
Zm00001d020268 (GRMZM2G136663)
- - - - -7.09 -5.08 - - - -6.16 - -5.14 - 0.66 - -1.98 -4.23 - -2.32 -0.75 0.19 -1.54 0.27 2.1 -0.94 - -0.74 0.03 - -3.16 4.47 -0.57 -0.88 0.62 -5.42 - -
Zm00001d020609 (GRMZM2G147966)
-0.63 -2.75 -0.17 0.58 0.07 0.13 -1.44 -1.02 -1.45 -1.37 -1.34 -1.08 -2.99 1.05 -1.29 0.16 -1.71 -0.76 0.79 -11.89 -1.03 -1.8 -1.51 -2.36 -1.95 -2.1 0.8 0.43 2.22 0.56 2.17 1.79 0.01 -0.73 -1.75 0.11 -0.25
Zm00001d021687 (GRMZM2G077008)
- - - - -10.6 -6.8 -5.22 - - - - -4.65 - - -6.93 -6.07 -3.57 -6.14 -1.34 - -1.27 -0.43 -3.56 -1.32 -1.2 - 0.79 0.5 1.49 - 4.57 -3.77 -0.43 1.78 -1.96 -3.55 -3.67
Zm00001d021803 (GRMZM2G000453)
-6.35 -4.69 -7.24 - -4.64 -2.57 -3.18 0.31 -2.82 -1.13 -4.06 -0.85 -3.8 1.8 1.15 -1.89 0.39 1.0 0.79 -8.67 1.41 0.54 -2.09 0.24 0.83 1.14 0.09 -0.16 0.55 0.57 1.71 -0.49 -1.57 0.4 -1.99 0.01 0.86
Zm00001d022227 (GRMZM2G056407)
- - -7.79 - -4.19 -0.9 -0.2 -0.29 -1.57 -0.89 -0.84 0.01 -4.84 0.03 1.41 -1.93 0.75 -0.06 0.86 -7.81 0.81 -1.26 -0.03 1.36 -0.31 1.72 -0.73 -0.16 -0.7 -0.97 2.95 -3.09 -1.29 -0.66 -0.29 0.11 -0.82
Zm00001d023859 (GRMZM2G300965)
-1.11 -0.89 -1.6 2.37 1.26 - - -2.16 - - - -1.15 - -4.35 -4.85 -3.67 -0.51 -3.76 -3.8 - 0.01 -0.27 - -2.71 -0.85 - 0.85 0.62 -1.87 -1.26 4.02 -1.15 0.79 -0.63 -0.78 -4.61 -2.34
Zm00001d024303 (GRMZM2G368890)
-9.1 -11.13 -8.77 - -11.09 - - - - - - -9.61 - - -10.34 -9.64 - - -12.77 -9.84 - - - -10.17 -8.37 - -0.14 1.12 - - 4.77 -6.13 0.47 2.38 -11.71 -6.42 -9.53
Zm00001d025225 (GRMZM2G439668)
-1.77 -5.22 -1.11 -0.27 0.41 0.6 -1.46 -1.18 -0.32 0.22 -1.48 1.29 - - -0.26 -1.41 -2.59 -2.23 -5.22 - -5.37 -3.75 3.17 -1.69 -0.31 -0.94 -2.62 -3.68 0.22 - 3.39 - -3.98 -3.22 -1.64 0.17 0.12
Zm00001d025753 (GRMZM2G005633)
-4.77 -4.66 -4.01 -3.02 -2.61 -6.44 -10.75 -7.4 -12.57 - -6.09 -4.39 -8.48 -4.68 -4.42 -2.59 -12.77 -2.57 -5.12 -10.48 -8.48 -4.75 -2.11 -10.95 0.78 1.3 0.57 2.06 1.68 -2.87 4.01 0.62 1.54 0.75 -3.01 -4.27 -3.36
Zm00001d025833 (GRMZM2G139797)
- - - - -11.85 -4.85 -7.39 -5.65 -8.44 -8.71 -7.0 -5.38 - - -9.81 -12.36 - -9.13 -8.78 -10.84 -10.54 - - -6.45 -6.93 - -0.1 0.9 - -8.48 4.59 -0.27 0.8 2.9 -13.56 -6.7 -9.84
Zm00001d025918 (GRMZM2G468688)
- -1.59 - - -0.33 1.45 -2.2 - 1.21 -1.46 - -1.37 - - 0.72 0.83 0.29 -2.32 -1.3 - 0.32 0.2 - 1.32 1.05 1.53 - -0.94 - - 3.33 - -1.0 0.37 0.44 -0.32 -2.09
Zm00001d028986 (GRMZM2G314064)
-1.13 -3.09 -0.93 -0.9 0.54 -8.49 -4.56 -4.46 - - -3.62 -5.39 - -4.4 -2.74 -1.13 - -6.01 -6.03 -7.97 -4.89 -5.52 -3.88 -5.33 -6.61 - 1.95 -1.2 - - 4.73 - -1.68 0.32 -3.22 -3.14 -2.38
Zm00001d029062 (GRMZM2G054916)
-5.92 -6.04 -7.39 -7.65 -8.08 - - - - - - -8.25 - -10.01 - -6.6 -8.88 -2.77 -9.8 -12.24 -9.12 -7.96 - -7.56 -5.78 -6.32 0.16 -3.23 -3.03 - 4.72 -0.43 0.21 2.83 -10.21 -10.51 -
-2.09 0.69 1.76 - -0.79 -0.73 - - - - 1.49 -0.96 - -1.57 -4.22 -0.24 0.82 -1.14 -1.8 -4.89 -2.1 -0.87 - -2.04 -0.7 1.39 0.06 -0.44 - - 3.86 - -4.59 -3.2 - 0.84 0.03
Zm00001d030860 (GRMZM2G039186)
-1.3 0.0 -0.06 0.29 0.16 0.05 -0.66 -0.6 -1.9 -1.72 -0.57 -0.23 -1.72 0.82 -0.53 0.3 -0.07 0.03 0.79 -7.34 -0.07 -0.92 -0.82 -0.17 -0.48 -0.68 -0.05 -0.13 1.0 1.48 1.76 1.56 -1.3 0.12 -3.3 -0.09 -1.54
Zm00001d031224 (GRMZM2G123489)
-3.86 -8.54 - - -8.72 - - -3.73 -7.26 - - -5.07 -3.05 -4.5 -0.39 -7.06 -8.02 1.5 -4.97 -4.48 -4.72 -3.02 - -5.7 0.19 3.02 0.72 -0.09 - - 4.16 - -3.9 0.88 -0.63 -1.77 -2.49
- - - - - - - - - - - -0.36 - - - - - - - - - - - - - - - 2.39 - - 4.57 - - 2.85 - - -
Zm00001d032091 (GRMZM2G400156)
-1.5 - -6.86 - -1.23 0.09 -5.94 -1.79 -3.18 -3.02 -3.68 -0.93 -0.98 -0.34 -1.36 0.23 1.27 -1.04 -2.32 -9.01 1.23 -0.06 0.1 0.31 0.17 1.04 -3.87 -3.5 - 0.73 3.99 - -1.98 -1.96 -7.27 -0.34 -2.43
Zm00001d032094 (GRMZM2G059138)
0.57 -4.92 -1.44 -0.46 0.27 -0.72 -1.58 -0.41 -0.94 -0.78 -4.07 -1.36 -3.83 -1.16 0.2 -1.93 -0.22 -2.06 -2.98 -10.99 0.71 1.79 - -1.23 -0.19 -0.28 0.32 0.49 -2.82 -2.42 3.57 -2.31 1.3 -0.59 -1.35 -0.98 -1.0
Zm00001d032610 (GRMZM2G103983)
- - - - -8.72 - - - - - - -8.18 - - - -3.43 -6.09 -4.34 -1.54 -9.03 0.52 -2.72 - -3.04 -3.37 - -1.55 1.39 - - 4.86 -2.38 1.18 -2.49 - -8.6 -4.24
Zm00001d033612 (GRMZM2G480954)
-12.51 - - - -11.34 - - -6.53 - - - -10.47 - -8.11 -7.77 -8.85 -4.45 -4.03 -8.21 -10.1 -2.19 -2.78 - -1.56 -4.27 - -0.22 0.89 - -5.32 4.84 -1.38 1.24 1.05 -13.19 -12.17 -11.56
Zm00001d034413 (GRMZM2G026703)
- - -10.52 - -14.19 - - -9.58 - - - -9.56 - - -14.01 -13.31 -6.61 -9.05 -12.37 - -6.8 -12.06 - -6.73 -9.51 - -3.8 -2.37 -5.96 - 5.13 -5.9 -0.79 0.07 - -16.52 -
Zm00001d034787 (GRMZM2G114992)
- - -5.15 - 0.86 -0.08 -3.66 2.4 -2.35 -1.2 0.25 0.19 - -1.65 -1.58 0.47 -2.48 -3.05 0.26 -3.78 0.37 -3.16 0.8 -0.33 -1.25 -3.67 - -0.77 - -0.49 3.13 2.33 -0.2 -1.21 -0.86 -0.27 -3.52
Zm00001d035560 (GRMZM2G025959)
-10.06 - -12.92 - -10.14 -13.0 - -9.29 - - - -7.78 - - - -9.01 -8.81 -7.61 - -15.27 -11.8 -7.57 - -5.57 -5.63 - -4.71 -0.52 - -9.72 4.84 -2.47 0.44 2.57 -9.38 -8.8 -10.01
Zm00001d037493 (GRMZM2G148167)
1.11 0.77 -5.03 0.74 -1.15 -7.17 -8.23 -4.54 -5.81 -6.96 - -4.93 -1.26 0.06 -1.6 -3.36 -1.44 2.34 -3.3 -4.96 -2.29 -2.35 - -2.12 -2.07 - -0.04 -0.64 - -2.18 4.13 -4.76 -1.23 1.11 -2.39 -1.88 -3.55
-3.25 - -2.65 - 0.77 - - 0.04 - - - -1.71 - - -5.45 -3.53 - -0.08 1.15 -3.09 - -0.66 3.11 - - - -0.86 -1.15 - 0.68 4.15 - -1.76 -3.98 -4.5 -3.02 -2.95
Zm00001d039377 (GRMZM2G534288)
-5.38 - -0.66 -1.0 -0.98 -1.04 -1.37 -3.21 -2.29 -5.1 -2.68 -0.63 -1.22 -5.54 -2.47 -1.23 -1.0 -0.74 -1.25 -6.05 -0.58 -1.1 -1.99 -0.45 -2.18 -2.84 1.78 0.59 2.51 -4.42 3.72 -1.52 0.96 0.04 -2.18 -2.12 -0.69
Zm00001d040026 (GRMZM2G114552)
-11.82 -7.33 -10.06 -8.47 -4.81 -10.19 -8.89 -1.2 -9.04 -7.99 -11.6 -6.72 -2.25 1.06 -2.74 -0.47 -3.36 -2.95 -5.74 -10.32 0.34 -1.36 - -0.05 -1.17 -9.46 0.46 -0.21 -6.43 -4.96 4.63 - -0.44 0.22 -0.76 -1.03 -3.9
Zm00001d040113 (GRMZM2G059358)
- - - - -9.42 - - - - - - -10.65 - -4.09 - -7.18 - -2.28 -11.68 -8.11 - -6.76 - - -4.93 -7.6 -4.12 2.03 -0.4 - 4.57 1.28 1.16 1.72 -4.64 -5.09 -4.35
Zm00001d043128 (GRMZM2G069511)
-1.69 -8.18 -5.89 -4.26 0.1 -3.67 -7.03 -1.36 -6.16 -6.38 -1.96 -1.89 - 0.5 -2.43 0.07 -5.35 -4.71 -0.48 -6.13 -0.15 -3.85 -7.07 0.7 -1.66 - -1.12 1.72 0.71 -1.08 3.46 1.73 2.62 0.63 -7.13 -3.93 -2.38
Zm00001d043265 (GRMZM2G006562)
- - - - - - - - - - - - - - - -4.89 - - -3.32 - - - - - - - 2.11 0.11 - - 4.64 1.73 -1.98 1.56 - - -
Zm00001d043464 (GRMZM2G043521)
-5.18 -6.52 -10.16 - -6.14 - - - - - - -8.86 - - -10.92 -10.71 - -7.13 -8.78 -8.06 - - - -9.63 -5.92 - 0.43 1.67 - - 4.59 0.2 1.39 2.19 -9.25 -9.65 -
Zm00001d044967 (GRMZM2G070455)
- - -2.14 - -4.41 -9.7 - - - - -5.34 -2.01 - - -9.02 -5.2 - -8.77 - -9.78 - - - - -4.15 - -1.38 -3.56 -3.8 - 4.9 - -1.39 2.45 -10.09 -7.03 -4.86
Zm00001d045896 (GRMZM2G057301)
0.13 1.29 0.91 0.22 -0.0 -3.44 -4.19 -0.67 -3.83 -3.62 -4.03 -3.13 -0.75 -1.02 -1.9 -0.37 1.1 -0.16 -1.14 -8.41 1.04 0.0 -2.64 1.47 0.25 -4.31 -0.47 0.6 - -2.2 2.41 0.22 1.02 0.21 1.01 -1.48 -0.09
Zm00001d048176 (GRMZM2G078441)
- - - - -12.74 - - - - - - -7.95 - - -11.72 -10.26 - - - -13.46 -12.47 - -7.14 -6.81 - - -1.95 0.62 - - 4.71 -2.36 0.03 2.98 -8.94 -8.4 -13.2
Zm00001d049795 (GRMZM2G017321)
- - - - -3.45 - -3.58 - - - - -6.68 - - 0.65 -0.14 - -2.55 -4.61 - - -0.85 - - -0.71 - -0.37 -0.73 - - 4.71 - -2.21 1.36 1.13 -1.31 -
Zm00001d051418 (GRMZM2G073738)
0.55 1.07 -0.68 - 1.02 -1.69 -0.39 -1.24 -4.63 -4.9 - -1.81 0.14 0.83 -0.85 1.61 -1.5 0.88 -0.23 -3.92 0.27 0.5 - 1.4 2.04 - -0.88 -0.09 - - 2.71 - -3.22 -0.49 -1.98 -0.58 -2.36
Zm00001d052102 (GRMZM2G097081)
- - - -0.28 1.52 1.18 -3.11 -0.05 - -2.92 -1.59 -0.3 - 1.11 -0.36 1.29 -1.37 - -3.05 -2.26 -5.15 - - -2.87 -2.24 - -1.36 -1.83 - - 4.05 - -2.88 0.74 - 1.52 -1.99
Zm00001d052333 (GRMZM5G822947)
-5.79 -2.93 -1.48 -0.28 0.26 -5.85 -4.54 -1.64 -6.24 -6.25 -4.65 -2.77 -4.04 -1.75 -3.63 -1.9 1.81 -2.97 -2.73 -10.16 0.44 -0.48 -0.23 -0.06 -1.15 -5.57 1.68 0.19 0.02 -1.43 3.47 0.93 1.39 0.35 1.03 -1.97 -3.36
Zm00001d052958 (GRMZM2G325118)
-12.8 - - - -13.01 - - -13.1 - - - -9.53 - - - -14.08 - -10.2 -7.04 -11.05 -7.89 -9.89 -12.5 -7.56 -13.23 -12.66 -4.49 1.14 -6.04 - 4.95 -3.68 1.03 0.68 -12.49 -14.69 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.