Heatmap: Cluster_263 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
AT1G04950 (TAF6)
1.65 1.04 1.08 1.05 0.68 -0.24 1.05 -2.63 -2.96 -5.32 -4.24 -5.49 -6.44 0.13 -0.18 -0.32 -0.24 -0.97 -1.73 0.76 -0.13 -0.03 0.25 -0.35 -1.21 -0.32 -1.09 1.0 -0.18 -0.88 0.25 -0.5 -0.51 -0.32 0.04 -0.37 0.17 0.14 0.35 0.23 -0.31 -1.15 0.04 0.86 -0.3 0.27 0.77 -0.21
AT1G08060 (MOM)
0.44 1.18 -0.48 0.08 -0.49 -0.5 -0.16 -0.97 -0.83 -1.75 -1.63 0.13 -1.77 0.67 0.6 -0.08 0.14 -0.56 -0.04 0.8 -0.07 0.08 0.39 -0.23 -0.54 -0.18 0.52 1.03 0.54 -0.66 0.85 -0.3 -0.23 -0.52 0.28 -0.32 0.35 -0.08 0.48 -1.15 1.73 -0.51 -0.53 -0.35 -0.29 -3.71 -1.55 -1.36
AT1G08620 (PKDM7D)
1.32 0.73 0.58 0.38 0.3 -0.37 0.35 -0.28 -0.63 -2.42 -1.95 -7.58 -4.47 0.48 0.68 -0.24 0.36 0.28 -0.23 0.42 0.3 -0.33 -0.14 -0.61 -1.4 -0.6 0.71 0.47 0.67 -2.11 0.44 -0.05 -0.4 -0.17 0.1 -0.49 0.24 -0.37 0.23 -1.31 0.83 0.19 -0.0 0.11 0.15 0.16 -0.61 -0.64
2.04 0.93 1.59 1.87 1.19 0.05 1.48 -2.53 -2.55 -4.09 -3.12 -0.55 -2.25 0.47 0.06 -1.08 -1.19 -1.33 -0.86 0.34 -0.57 -0.29 0.39 -0.83 -1.69 -1.16 -1.71 0.8 1.13 -2.17 0.57 -0.22 -0.57 -1.02 0.68 -0.42 -0.06 -0.35 -1.64 -2.09 -3.18 -0.73 -0.74 1.09 0.35 - -12.91 -0.33
1.12 0.6 -3.47 -2.93 -3.22 -5.08 -3.47 -9.96 - -10.19 -10.08 - -10.88 0.23 1.01 0.35 0.9 -0.17 -1.9 0.79 -0.27 0.29 0.14 0.18 -1.54 0.26 -1.77 0.21 2.28 -1.93 0.73 0.48 0.26 -0.0 -0.03 -0.18 1.38 0.14 1.27 -1.43 -1.92 -0.85 -0.34 -0.11 0.01 2.15 -4.02 -0.74
1.18 0.97 0.85 0.6 0.03 -1.5 0.43 -3.24 -3.01 -3.0 -2.71 -4.03 -3.76 0.46 -0.4 -0.39 -0.17 -0.54 -0.66 0.92 0.12 -0.01 0.44 -0.48 -1.08 -0.54 -0.28 0.94 -0.18 -1.59 0.58 0.25 -0.55 -0.02 0.56 -0.37 0.3 -0.02 0.27 0.04 1.22 -0.34 -0.09 1.15 0.33 -1.8 -0.03 -0.03
AT1G64790 (ILA)
2.16 0.79 0.28 0.71 0.19 -0.88 0.27 -5.15 -4.53 -6.22 -5.41 -5.59 -7.49 0.73 -0.49 -0.47 -0.57 -0.46 -1.38 0.6 -0.27 0.8 1.28 -0.69 -1.27 -0.81 -1.87 1.13 0.27 -2.34 0.5 0.81 -0.34 -0.6 0.34 -0.33 -0.4 0.08 -0.54 -1.99 -2.84 -1.24 -0.04 1.71 1.31 -1.15 -2.3 0.78
2.36 1.23 -0.42 -0.08 -0.37 -2.96 -0.6 -4.98 -5.59 -5.83 -5.9 -0.87 -3.38 0.95 0.63 -0.69 -1.86 -1.49 -1.32 1.08 -0.15 1.08 1.76 -1.2 0.16 -1.58 -2.43 0.74 1.7 -0.51 0.75 0.29 -0.55 -2.04 0.57 -0.44 0.07 -0.09 -0.69 -2.55 -2.69 -2.18 -1.32 1.59 0.56 - -4.87 0.04
AT1G70060 (SNL4)
1.31 -0.43 -2.05 -0.99 -1.71 -2.88 -1.71 -6.55 -7.81 -7.22 -8.34 -6.55 -5.63 0.94 0.66 0.22 1.01 0.11 -0.47 -0.06 -0.61 0.23 0.57 -0.51 -0.8 0.01 0.97 0.57 0.86 -1.64 -2.9 0.51 0.17 0.49 0.38 0.28 0.8 0.27 1.05 -0.23 -0.71 0.18 0.42 0.22 0.84 1.43 -0.8 -0.29
1.64 -0.09 -1.21 -1.04 -1.08 -1.28 -0.98 -3.9 -4.41 -6.88 -5.95 -9.73 -5.87 -0.29 0.11 0.24 0.49 0.26 -1.26 0.27 0.15 0.17 0.15 -0.05 -0.43 0.2 0.43 0.23 0.5 -0.96 -0.04 0.67 -0.05 0.53 -0.21 0.29 1.01 -0.16 0.44 -0.54 0.59 0.19 0.22 0.0 0.85 1.69 -0.3 -0.26
AT2G03070 (MED8)
1.41 0.96 0.3 -0.85 0.26 0.05 -0.6 -1.48 -2.79 -4.07 -5.29 -3.57 -1.6 0.33 -0.92 -0.15 -0.21 -0.83 -0.86 1.09 0.07 0.1 0.52 -0.25 -1.08 -0.44 0.18 1.25 1.09 -1.1 0.63 0.46 -0.17 -0.25 0.75 -0.41 0.12 0.07 -0.2 -1.12 -2.22 -0.11 0.29 1.33 0.41 0.3 -3.37 0.17
AT2G14120 (DRP3B)
1.47 0.43 0.72 0.82 0.08 -1.39 0.58 -4.88 -5.61 -5.37 -4.67 -7.61 -2.99 0.25 -0.49 -0.22 0.26 -0.03 -0.75 0.38 0.34 -0.08 0.24 -0.28 -1.22 -0.33 -0.16 -0.03 -0.19 -1.7 0.46 0.06 -0.81 -0.1 0.03 0.36 0.44 -0.03 -0.12 -1.7 -0.59 0.53 0.44 0.82 0.75 0.94 1.11 0.22
AT2G16920 (PFU2)
0.96 0.07 0.52 0.66 0.29 -0.17 0.67 0.08 -0.24 -1.44 -1.12 -12.22 -2.39 0.05 0.77 -0.48 -0.4 -0.33 -0.08 -0.05 -0.41 -0.35 0.15 -0.6 -1.15 -0.64 0.18 0.12 1.84 -1.64 0.15 0.27 -0.34 0.14 -0.02 -0.16 -0.13 -0.33 -0.16 -2.11 -1.63 0.72 0.48 0.24 1.01 -0.06 -1.22 0.03
1.96 0.31 -0.22 -0.75 -1.32 -5.12 -1.45 -8.37 -6.58 -9.43 -8.89 -9.04 - 0.1 0.67 1.69 1.94 -0.23 -1.53 0.22 0.6 0.28 0.28 0.16 -2.45 0.63 0.44 0.78 1.02 -4.15 -0.32 0.26 0.05 0.36 0.13 -0.15 0.76 0.02 0.97 -1.6 -1.56 0.06 -0.82 -0.14 -0.28 -0.39 -1.9 -0.97
AT2G31970 (RAD50)
1.99 1.24 0.39 0.71 0.04 -1.17 0.32 -4.58 -3.89 -4.57 -4.31 -1.61 -2.15 0.42 0.83 -0.2 -0.56 -0.99 -1.34 0.97 -0.06 0.48 1.24 -0.62 -0.51 -1.05 -1.33 0.91 0.96 -0.77 0.7 0.14 -0.11 -0.68 0.7 -0.53 0.29 -0.15 0.11 -1.47 -0.58 -0.88 -0.9 1.13 0.04 -9.22 -1.13 -0.35
1.99 0.39 0.88 0.76 0.31 -1.7 0.47 -5.05 -6.55 -6.42 -6.39 -8.62 -10.37 -0.66 -0.56 -1.44 -1.25 -2.2 -1.11 0.39 -1.33 -1.16 -0.4 -1.01 0.45 -1.25 -0.83 0.84 1.19 0.6 0.16 -0.26 -0.72 -0.18 0.37 -1.19 0.66 -0.64 0.02 -0.52 2.04 0.8 -0.23 0.49 -0.15 -1.92 1.61 -0.68
AT2G35110 (GRL)
1.04 0.8 -1.76 -2.59 -2.34 -3.34 -2.84 -11.6 -11.43 -8.71 -8.78 - -10.75 0.3 0.03 -0.07 0.22 0.13 -1.2 0.83 0.04 0.17 0.56 -0.13 -2.64 -0.04 -0.81 1.02 0.57 -3.4 0.72 0.09 -0.09 0.18 0.57 0.47 0.51 0.08 -0.07 -0.96 -1.07 0.34 0.63 0.41 0.74 2.75 -2.33 -0.09
AT2G41520 (TPR15)
0.96 1.1 0.61 0.82 0.66 -0.52 0.85 -3.07 -3.16 -4.09 -3.77 -5.16 -2.91 0.36 0.33 -0.17 0.09 -0.31 -0.77 0.93 -0.02 0.25 0.91 -0.25 -0.53 -0.34 -0.06 0.94 0.48 -0.71 0.82 -0.05 -0.15 -0.24 0.73 -0.24 -0.73 -0.02 -0.46 -0.8 -1.0 -0.02 -0.66 1.01 0.3 -1.62 -1.37 0.02
AT3G01460 (MBD9)
0.2 1.12 0.49 0.49 -0.12 -1.33 0.2 -2.97 -4.02 -5.57 -5.71 -5.0 -2.86 0.77 0.21 -0.03 0.18 0.03 -0.43 0.97 0.45 0.08 0.67 -0.36 -0.8 -0.31 0.42 1.27 1.16 -1.26 0.78 0.02 -0.47 -0.47 0.95 -0.32 0.01 -0.28 -0.09 -1.16 0.17 -0.7 -0.53 0.5 0.34 0.63 -2.13 -0.45
0.69 0.85 1.6 2.02 1.34 -0.73 1.73 -5.52 -6.27 -5.06 -4.6 -5.68 -4.1 0.29 0.36 -0.43 -1.24 -1.08 -1.06 1.02 -0.26 0.42 1.03 -0.83 -1.13 -1.07 -2.44 0.97 0.78 -0.95 0.64 0.07 -0.37 -0.65 0.75 -0.59 -0.18 -0.07 -0.81 -3.69 -1.4 -1.47 -1.59 1.04 0.2 - -11.7 -0.06
AT3G07980 (MAPKKK6)
-0.19 0.93 0.01 0.55 0.52 0.08 0.56 -0.3 0.03 -0.67 -0.32 -3.13 -1.72 0.67 0.42 -0.09 0.34 0.1 -0.1 0.4 0.51 -0.18 -0.08 -0.22 -1.49 -0.21 0.58 -0.0 -0.44 -2.73 0.65 -0.44 -0.58 0.05 -0.26 -0.06 0.5 -0.36 -0.02 -1.99 1.18 0.15 -0.13 -0.44 0.42 -0.28 -0.0 -0.95
AT3G08850 (RAPTOR1)
1.78 0.57 -0.3 -0.62 -0.73 -1.4 -0.58 -2.05 -2.46 -2.82 -3.27 -6.24 -3.16 0.43 -0.13 -0.01 0.08 -0.1 -0.37 0.48 -0.05 0.03 0.39 -0.31 -0.07 -0.12 0.67 0.79 0.11 -0.37 0.33 0.23 0.08 0.38 0.22 0.06 0.89 0.12 1.35 -0.92 0.26 0.63 0.03 0.47 0.36 -1.25 -4.2 -0.48
1.04 0.75 -0.01 -0.07 -0.48 -1.53 -0.05 -1.87 -1.73 -2.41 -2.13 -0.05 -2.5 0.17 -1.72 -0.72 -0.7 -0.56 -0.39 0.71 -0.5 0.1 0.63 -0.71 -0.31 -0.72 0.27 1.14 -0.06 -0.69 0.68 0.01 -0.44 -0.27 0.69 -0.62 -0.04 -0.13 0.19 -0.49 0.77 -0.24 -0.21 1.19 0.5 0.68 1.03 0.2
1.24 0.85 0.56 0.03 0.21 0.16 0.03 -0.92 -2.38 -4.55 -4.18 - -2.6 0.54 0.11 -0.19 0.1 -0.02 -1.24 0.83 -0.47 0.39 0.89 -0.38 -1.68 -0.22 0.17 0.6 -0.61 -2.74 0.56 0.18 -0.31 0.28 0.32 0.1 0.44 -0.11 0.7 -2.03 -2.46 -0.16 0.63 0.83 1.23 -0.13 -2.55 0.21
AT3G12810 (PIE1)
1.34 1.44 -0.15 0.31 -0.47 -0.95 0.15 -4.26 -4.92 -6.39 -5.36 - -5.74 0.82 0.65 -0.15 -0.35 -0.72 -1.16 0.93 -0.2 0.28 0.96 -0.26 -0.96 -0.25 0.42 1.41 1.24 -1.29 0.77 0.09 -0.28 -0.47 0.78 -0.26 0.53 -0.03 0.18 -2.07 -0.7 -0.66 -0.15 0.92 0.31 -4.52 -2.01 -0.15
AT3G13222 (GIP1)
0.67 1.34 0.98 0.68 0.35 -1.58 0.41 -4.73 -4.12 -5.21 -3.88 -2.05 -5.18 0.02 -1.0 -1.06 -0.68 -0.74 -0.93 1.38 0.18 0.31 0.91 -0.15 -1.17 -0.3 -1.34 0.64 0.52 -1.12 0.94 -0.05 -0.53 -0.51 0.58 0.2 -0.81 0.29 -0.4 0.77 -1.43 -0.97 -0.29 1.68 0.36 -0.4 0.03 0.25
1.54 0.86 -1.27 -1.66 -2.09 -3.72 -1.83 -6.7 -7.04 -7.89 -7.51 -5.56 -9.4 0.4 0.41 0.2 0.55 0.2 -1.38 0.88 0.29 0.17 0.76 -0.01 -1.92 0.03 -0.33 0.74 0.84 -2.52 0.58 0.39 0.1 0.59 0.57 0.58 0.46 0.19 1.0 -1.3 -1.84 0.19 0.89 0.73 0.6 -0.14 -0.32 0.09
1.08 0.84 0.64 0.85 0.48 -1.08 0.74 -3.88 -4.73 -5.93 -4.4 -6.46 -6.68 0.01 0.24 -0.36 -0.26 -0.31 -0.62 0.68 0.18 0.24 0.35 -0.38 0.42 -0.32 -0.81 0.36 0.78 0.05 0.72 0.24 -0.55 -0.03 0.72 -0.07 0.84 0.01 0.21 -1.52 0.2 0.14 -0.46 0.61 0.12 0.39 -7.33 -0.39
AT3G27670 (RST1)
1.59 0.86 -0.35 -0.37 -0.47 -1.35 -0.4 -1.91 -2.76 -4.9 -5.46 -7.47 -4.34 0.73 0.31 0.32 0.37 0.23 -0.99 0.61 0.42 0.04 0.42 -0.06 -1.65 0.05 -0.24 0.47 1.02 -1.68 0.58 0.01 -0.3 0.1 0.04 0.3 0.7 0.03 1.23 -0.94 -0.37 -0.24 0.48 0.85 0.69 -1.41 -3.71 -0.06
AT3G44530 (HIRA)
1.63 0.93 0.83 0.51 0.07 -1.81 0.31 -3.61 -5.24 -6.72 -6.08 -7.81 -4.89 0.4 0.53 -0.13 0.84 -0.18 -0.22 0.76 0.2 0.05 0.59 -0.36 -0.54 -0.42 0.1 1.04 1.02 -0.92 0.64 0.04 -0.27 -0.52 0.69 -0.37 0.46 0.08 -0.05 -3.89 -1.14 -0.5 -0.14 1.1 0.12 - -1.85 0.02
AT3G54280 (RGD3)
1.83 0.6 0.7 1.13 0.82 0.39 0.99 -1.01 -1.6 -2.65 -2.45 -3.91 -2.33 0.38 -0.21 -0.51 -0.7 -0.82 -0.46 0.32 -0.5 0.09 0.55 -0.65 -1.1 -0.58 0.28 0.88 0.28 -1.73 0.26 0.02 -0.59 -0.67 0.24 -0.34 0.01 -0.39 -0.32 -1.46 -1.35 -0.54 -0.18 1.12 0.59 0.54 -1.24 0.13
0.61 0.84 -0.06 -0.02 -0.23 -0.49 -0.12 0.2 -0.24 -2.25 -1.64 -1.93 -0.59 0.46 -0.07 -0.05 -0.15 0.1 -0.04 0.49 -0.32 0.2 0.6 -0.54 -1.4 -0.34 0.5 1.0 0.97 -2.28 0.37 0.24 -0.38 -0.21 0.37 -0.24 -0.13 -0.12 0.18 -1.85 -0.74 0.42 0.19 0.57 0.45 0.17 -0.3 -0.17
AT4G00660 (RH8)
1.5 0.19 1.68 1.11 1.01 -0.1 1.1 -1.35 -1.67 -3.17 -2.4 0.47 -2.08 0.05 -1.44 -0.59 -0.35 -0.14 -0.81 0.12 -0.34 -0.54 0.02 -0.78 -1.63 -0.89 -0.19 0.35 0.05 -2.09 0.12 0.1 -1.07 -0.19 0.12 -0.99 -0.26 -0.45 0.15 -1.47 0.35 0.21 0.53 0.08 0.7 -0.3 0.56 0.25
AT4G03550 (GSL5)
0.36 0.72 0.19 0.16 -0.33 -0.63 -0.18 -1.27 -1.2 -1.5 -1.86 -7.89 -0.77 0.23 0.01 -0.56 -0.29 0.19 -0.34 0.72 -0.27 0.17 0.87 -0.44 -1.49 -0.69 -1.15 1.51 1.11 -2.01 1.17 0.4 -0.14 0.35 1.02 0.39 -0.53 -0.11 0.29 -0.82 -3.54 -0.61 0.24 0.52 0.58 0.04 -0.41 -0.26
1.44 1.16 0.59 1.02 0.25 -1.7 0.41 -5.96 -6.83 -6.01 -5.76 -9.05 -5.29 0.8 -0.07 -0.58 -1.1 -1.19 -1.18 1.08 -0.05 0.84 1.35 -0.99 -0.42 -1.37 -2.52 1.53 0.14 -1.0 0.53 0.33 -0.47 -0.78 0.7 -0.33 0.21 0.07 -0.28 -2.35 -1.83 -1.88 -0.98 1.6 0.73 -9.78 0.37 0.55
0.75 0.31 1.6 1.16 1.63 1.61 1.37 0.44 0.18 -0.65 -0.05 -1.92 -2.01 -0.5 -1.56 -0.93 -0.73 -0.53 -0.44 0.07 -0.31 -0.8 -0.31 -0.91 -2.0 -0.99 -0.08 -0.04 0.04 -2.83 0.18 -0.35 -1.04 -0.35 -0.15 -0.97 -0.64 -0.56 -0.51 -1.94 -0.95 -0.01 -0.1 0.64 0.0 -0.97 0.69 0.32
2.06 1.36 0.05 0.24 0.14 -0.83 -0.15 -3.52 -3.54 -4.73 -4.25 -4.65 -3.92 0.62 -0.45 -0.89 -1.28 -1.16 -0.65 0.82 -0.72 -0.02 0.68 -0.73 -0.36 -1.08 -0.32 1.96 1.65 -0.98 0.86 -0.36 -0.64 -0.92 0.9 -0.5 0.13 -0.24 -0.4 -1.19 -0.42 -1.2 -0.77 0.91 0.21 -1.21 0.11 -0.23
1.39 0.06 0.81 1.01 0.3 -0.71 0.89 -2.04 -2.28 -3.54 -3.19 -4.61 -3.09 0.1 0.12 -0.65 -0.69 -0.68 -1.5 0.22 -0.48 -0.35 0.4 -0.64 -0.88 -0.86 -0.38 0.47 1.15 -1.06 -0.18 0.07 -0.46 -0.57 0.18 -0.86 0.63 -0.01 0.05 0.19 1.41 -0.64 -0.21 1.06 0.21 -1.48 1.09 0.56
AT5G20320 (DCL4)
2.18 1.82 -0.8 -0.51 -1.64 -3.88 -1.0 -8.72 -10.39 -9.15 -6.58 -7.37 -7.87 1.06 0.33 -0.13 -0.82 -0.72 -1.15 1.53 0.44 0.06 0.89 0.21 -1.65 0.36 -0.83 0.72 1.39 -2.19 1.43 -0.61 -0.42 -0.53 0.71 0.4 0.93 0.43 0.31 -0.64 -6.06 -0.42 -1.4 0.31 -0.17 -4.24 -1.53 -1.4
AT5G37830 (OXP1)
1.09 0.47 -0.16 0.12 0.15 -0.14 0.2 -2.82 -3.01 -5.71 -5.06 -7.41 -9.38 0.66 0.29 0.29 -0.14 0.22 -0.92 0.46 -0.21 0.26 0.62 -0.06 -2.32 0.09 -0.18 0.63 1.23 -2.99 0.51 0.26 0.25 0.57 0.28 0.11 0.69 0.01 -0.05 -3.38 -3.51 1.08 0.38 0.33 1.09 -0.22 -2.55 0.15
0.76 1.59 0.18 -0.82 -1.01 -4.34 -1.22 -5.99 -5.49 -7.75 -6.33 -5.76 -4.53 0.69 -0.06 0.15 -0.09 -0.46 -0.76 1.0 -0.6 0.07 0.36 -0.06 -1.33 -0.14 0.09 1.06 1.28 -1.66 1.13 -0.19 -0.16 -0.34 0.79 -0.6 -0.18 -0.07 0.89 -0.09 1.09 0.57 -0.56 0.01 -0.25 0.83 0.36 -1.11
0.34 1.05 1.43 2.14 1.18 -1.25 1.98 -5.75 -4.78 -5.5 -3.64 -3.51 -1.01 0.4 0.77 -0.84 -1.09 -0.89 -0.95 0.97 0.12 0.09 0.82 -0.92 -1.76 -1.38 -1.84 1.24 -0.88 -1.31 0.67 -0.31 -0.36 -0.85 1.04 -0.45 0.24 0.02 -1.05 -4.82 -1.13 -1.73 -1.34 1.03 -0.29 - -8.57 0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.