Heatmap: Cluster_259 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Root (elongation zone)
Root (meristematic zone)
Root (stele)
Root (tip)
Root
Leaf (3rd leaf of seedling)
Leaf (3rd leaf)
Leaf (apex)
Leaf (bundle sheath)
Leaf (mesophyll)
Leaf (Seedling)
Leaf
Internode
Stalks
Shoot
Shoot (apex)
Tassels (primordia)
Tassels
Anther
Pollen
Ear (immature)
Ear (inflorescence)
Ear (leaf)
Ear (primordia)
Ear
Silks
Kernels (germinating)
Kernels
Maternal transfer zone
Nucellus
Embryo
Endosperm (transfer layer)
Endosperm
Seeds
Coleoptyle (5 day)
Seedling
Whole Plant
Zm00001d003423 (GRMZM2G065480)
-0.92 1.9 -0.98 0.59 -0.01 -8.0 -5.93 0.59 -5.47 -5.55 -3.59 -2.46 0.51 -0.06 -1.49 0.71 1.56 -0.12 0.06 -6.89 1.02 0.55 -3.96 1.08 0.58 -1.72 0.55 0.24 -2.19 0.68 1.22 -4.96 0.01 0.19 0.51 -1.59 -1.34
Zm00001d004090 (GRMZM2G064168)
-0.25 1.32 0.25 -0.63 -0.16 -5.51 -4.31 0.85 -2.21 -2.56 -1.49 -1.32 1.9 -1.02 -0.68 0.42 1.05 0.05 0.67 -3.48 0.61 0.31 -2.82 0.99 0.79 -1.19 0.63 0.37 -0.34 0.09 0.72 -1.85 0.07 -0.05 -0.81 -1.46 -1.82
Zm00001d005228 (GRMZM2G163769)
0.55 1.39 -0.44 0.62 0.04 -3.01 -1.9 0.24 -1.56 -1.84 -1.68 -1.19 0.88 -0.47 -0.83 0.24 1.06 0.35 0.07 -3.89 0.81 1.02 -1.85 0.94 1.13 -0.37 0.53 0.02 -1.21 0.54 0.12 -1.26 -0.5 -0.18 -0.43 -1.21 -1.62
Zm00001d006321 (GRMZM2G002948)
-0.44 1.26 -1.96 0.38 -0.21 -6.26 -5.95 1.14 -5.41 -5.86 -3.38 -2.68 0.44 -0.24 -0.19 0.09 1.65 0.26 -0.06 -6.28 1.31 0.5 -2.04 1.88 -0.28 -1.01 -1.26 0.08 -0.02 0.97 0.76 -1.08 -0.72 -0.53 0.61 -1.29 -0.97
Zm00001d006928 (GRMZM2G141551)
0.24 1.55 -0.41 -0.76 -0.04 -3.73 -2.11 0.42 -2.81 -3.44 -2.14 -1.55 1.27 0.01 -1.17 0.86 1.12 -0.44 0.28 -6.4 1.3 0.64 -2.71 0.94 1.02 -1.93 0.68 -0.1 -1.01 0.75 0.4 -0.62 -0.27 -0.47 -0.12 -1.49 -1.28
Zm00001d007145 (GRMZM2G009876)
0.06 1.3 -0.02 -0.29 0.04 -2.18 -0.95 0.46 -1.04 -1.51 -1.39 -0.82 1.31 0.1 -0.83 0.6 1.07 -0.21 -0.25 -6.09 0.53 -0.25 -0.1 1.14 0.51 -1.09 0.68 0.53 -2.24 0.33 0.19 -2.63 -0.1 -0.4 0.25 -0.78 -0.55
Zm00001d008360 (GRMZM2G049416)
0.2 1.63 -0.19 0.69 0.15 -3.08 -2.23 -0.07 -1.52 -1.77 -1.08 -0.95 1.09 -0.27 -0.73 0.5 1.17 0.31 0.6 -1.62 0.55 0.52 -2.71 0.41 0.69 -0.43 0.5 0.08 -1.65 0.5 0.39 -1.95 -0.05 0.04 -0.91 -1.05 -1.28
Zm00001d009117 (GRMZM2G009894)
0.46 1.72 -0.55 1.4 0.52 -3.06 -1.54 -0.48 -2.56 -3.05 -0.9 -1.14 0.01 -0.66 -0.45 0.65 0.17 -0.81 0.51 -6.51 0.36 -0.19 -1.73 -0.76 0.65 -0.2 -0.13 0.62 0.95 -0.14 -0.39 -1.34 0.02 0.06 1.53 -0.93 -0.64
Zm00001d010030 (GRMZM2G149975)
0.71 2.06 0.01 0.86 0.62 -4.09 -2.02 0.8 -1.17 -1.58 -1.23 -1.18 0.52 -0.62 0.37 0.45 0.55 -0.49 -0.41 -6.28 1.28 0.22 -0.83 0.51 0.29 -0.69 0.64 -0.37 -1.16 -1.12 -0.23 -1.12 -0.42 -0.63 0.23 -1.23 -0.99
Zm00001d010803 (GRMZM2G082707)
0.8 1.74 -0.02 0.59 0.15 -2.32 -1.02 -0.15 -1.0 -1.64 -1.75 -0.96 1.29 0.02 -0.33 0.37 0.68 -0.11 -0.02 -2.88 0.29 -0.11 -1.38 0.11 0.4 -1.01 0.85 -0.24 -0.54 -0.12 0.86 -1.99 -0.53 -0.22 0.79 -1.03 -1.46
-0.17 1.47 0.1 0.23 0.14 -5.16 -4.31 0.86 - -5.0 -3.59 -2.76 0.45 -1.9 -1.88 0.67 1.24 -0.02 1.34 -6.5 1.62 0.37 - 1.7 0.37 -2.6 0.85 -0.02 - 1.16 0.61 - -0.45 -0.51 -0.89 -1.63 -0.92
Zm00001d011263 (GRMZM2G423169)
-0.43 1.27 -0.75 0.62 0.11 -4.34 -3.58 0.49 -2.22 -2.83 -4.27 -1.27 1.77 -0.52 -0.61 0.39 1.15 0.27 0.75 -7.15 0.93 0.46 -2.32 1.4 0.27 -0.7 0.38 0.12 -1.74 0.65 0.03 -1.16 -0.4 -0.5 0.22 -1.1 -1.71
Zm00001d011877 (GRMZM2G102314)
-1.49 0.96 -0.47 1.21 -0.13 -3.09 -2.82 0.78 -3.36 -3.36 -2.5 -1.21 0.88 -0.84 -1.32 0.56 1.85 -0.36 0.35 -6.18 0.92 0.64 -1.48 1.54 0.19 -0.85 0.11 0.2 -3.69 0.98 0.45 -0.8 -0.29 -0.63 0.22 -1.32 -1.5
Zm00001d012890 (GRMZM2G125784)
0.7 1.41 -0.5 0.27 0.33 -3.26 -2.67 -0.44 -1.87 -2.45 -1.17 -1.23 0.51 -0.1 -0.62 0.49 0.37 -0.19 0.42 -4.25 0.89 -0.36 -1.95 0.09 0.53 -0.85 0.87 0.46 0.59 0.49 0.86 0.59 0.22 -0.2 -0.52 -0.9 -0.81
Zm00001d012930 (GRMZM2G121743)
0.64 1.61 -0.02 0.06 0.22 -2.52 -1.7 0.37 -0.76 -1.07 -1.88 -1.02 0.86 -1.08 -0.48 0.5 0.76 -0.21 -0.04 -5.86 0.75 -0.07 -1.01 0.61 0.49 -1.12 0.77 -0.06 -0.35 0.0 1.03 -0.95 -1.02 -0.62 0.98 -0.91 -1.15
Zm00001d013730 (GRMZM2G067306)
0.18 1.73 -0.2 0.67 -0.04 -3.52 -3.49 -0.28 -2.53 -2.84 -1.33 -1.38 0.99 -0.38 -1.36 0.22 0.75 0.12 0.35 -1.19 0.64 0.26 -1.48 0.87 0.22 -0.72 0.33 0.31 0.42 -0.12 0.83 -0.42 0.34 0.58 -0.68 -1.2 -1.29
Zm00001d013999 (GRMZM2G001887)
0.41 0.83 -0.11 0.53 0.07 -1.69 -1.4 -0.11 -0.9 -1.02 -1.15 -0.61 0.8 0.31 0.02 0.35 0.83 -0.38 0.23 -4.43 0.34 0.69 -1.42 0.29 0.57 0.04 0.58 -0.06 -1.69 0.63 0.52 -2.55 -0.39 -0.45 0.72 -0.43 -0.17
Zm00001d015449 (GRMZM2G136599)
0.02 1.13 -0.6 0.33 -0.07 -2.86 -1.81 0.18 -1.58 -1.8 -1.38 -0.94 1.77 -1.07 -0.76 0.49 1.12 0.08 -0.03 -4.25 0.95 0.73 -1.06 1.01 0.47 -1.38 0.22 0.32 -2.71 0.29 0.45 -2.66 0.35 0.14 0.26 -0.96 -1.16
Zm00001d015586 (GRMZM2G119890)
-0.63 1.46 -0.31 -0.25 -0.1 -3.51 -2.06 0.31 -1.63 -1.82 -1.06 -1.06 1.25 -1.19 -1.12 0.58 1.1 -0.32 -0.39 -4.61 0.93 -0.62 -1.5 0.56 0.51 -0.91 0.65 0.55 -0.96 0.58 1.32 -0.88 0.49 0.67 0.26 -1.25 -1.46
Zm00001d019562 (GRMZM2G160351)
0.76 2.01 0.13 0.07 0.45 -2.82 -1.2 -0.14 -1.01 -1.3 -1.2 -0.88 0.49 -0.42 0.08 0.38 0.57 -0.08 -0.01 -6.46 0.52 0.12 -1.8 0.14 0.96 -1.06 0.74 -0.02 -1.64 -0.17 1.22 -2.22 -0.14 0.1 -0.52 -0.96 -0.87
Zm00001d020561 (GRMZM2G003342)
-0.07 1.57 -0.11 -1.02 -0.19 -3.43 -2.38 0.52 -2.4 -2.2 -1.37 -1.38 1.2 -0.33 -0.9 0.86 1.51 -0.39 -0.41 -4.04 0.1 0.72 -2.51 1.42 0.34 -1.52 0.55 0.3 0.29 -0.93 0.32 0.47 0.46 -0.06 -0.62 -1.11 -1.66
Zm00001d020980 (GRMZM2G080243)
-0.73 0.8 0.09 0.96 0.08 -3.03 -2.58 0.71 -2.79 -3.13 -1.44 -1.48 0.8 0.13 -0.6 0.67 1.46 -0.27 0.09 -2.95 0.69 0.5 -1.74 1.13 0.98 -0.47 1.37 -0.9 -2.79 -0.62 0.76 -1.79 -2.59 -1.18 0.63 -0.95 0.05
Zm00001d022058 (GRMZM2G050501)
-0.84 1.51 0.2 0.86 0.33 -3.36 -1.85 0.66 -1.4 -1.59 -1.79 -1.09 1.29 -1.29 -0.66 0.35 1.4 0.05 0.12 -5.73 0.71 0.67 -2.2 1.47 0.2 -1.29 0.3 -0.42 -2.72 0.22 0.51 -3.25 -0.2 -0.27 0.37 -1.07 -1.51
Zm00001d022614 (GRMZM2G032711)
-0.18 1.53 0.43 0.46 -0.05 -5.25 -5.72 0.37 -4.11 -4.7 -3.19 -2.34 0.11 -0.45 -0.76 0.5 1.69 -0.06 0.48 -8.02 1.03 0.93 -4.84 1.71 0.48 -0.93 0.18 -0.37 -0.83 -0.18 0.74 -2.33 -0.82 -0.67 1.01 -1.35 -1.4
Zm00001d024373 (GRMZM2G178807)
-0.12 1.6 -0.72 0.51 0.2 -4.32 -3.62 0.37 -2.79 -3.11 -1.72 -1.39 1.14 -0.68 -1.08 0.62 1.43 -0.0 0.48 -6.5 1.09 0.58 -1.86 0.89 1.27 -1.26 0.96 -0.26 -0.27 -0.52 0.76 -2.61 -1.19 -0.33 -0.26 -1.46 -1.37
Zm00001d024675 (GRMZM2G003897)
-0.42 0.98 -0.29 0.81 0.22 -2.47 -2.96 0.45 -1.43 -1.72 -0.85 -0.68 1.07 -0.51 -0.25 0.53 0.67 -0.06 0.57 -4.12 1.14 1.18 -1.47 0.18 0.82 0.48 0.49 -0.3 -0.19 0.14 0.14 -1.7 -0.41 -0.82 -0.49 -0.77 -1.13
Zm00001d027512 (GRMZM2G090738)
0.28 1.81 -0.17 1.54 0.22 -6.23 -5.75 0.14 -5.01 -5.29 -2.51 -2.6 0.98 -0.25 -1.17 0.37 1.09 -0.3 -0.12 -7.06 0.27 0.61 -3.83 0.62 0.92 -1.07 0.7 0.45 -3.54 0.55 0.96 -2.02 0.01 -0.09 -0.07 -1.66 -0.48
0.92 1.52 -1.08 1.23 0.0 -4.06 -3.2 0.27 -2.46 -2.79 -2.84 -1.92 1.36 -0.65 -0.63 0.51 0.7 -0.02 -0.21 -7.03 1.16 1.37 -2.42 0.03 0.82 -1.56 0.19 -0.08 -2.73 0.56 0.93 -1.48 -0.07 -0.19 -0.44 -1.07 -1.2
Zm00001d029198 (GRMZM2G102548)
-0.4 1.62 0.27 0.71 0.16 -4.17 -2.45 -0.17 -3.76 -4.11 -1.49 -1.43 0.89 -0.19 -1.16 0.35 0.89 -0.18 0.85 -6.42 0.54 0.25 -2.12 1.28 0.18 -0.32 0.92 0.11 -0.86 0.88 0.5 -3.85 0.03 0.12 -0.02 -0.94 -0.92
Zm00001d034409 (GRMZM5G856966)
0.09 1.36 -0.25 0.99 0.18 -1.82 -1.63 -0.11 -0.68 -0.86 -1.01 -0.77 0.74 -0.06 -0.25 0.55 0.91 -0.17 -0.05 -5.38 0.94 -0.1 -0.79 0.79 -0.0 -0.74 0.4 -0.19 -1.59 0.27 0.7 -2.78 -0.52 -0.22 0.88 -0.63 -0.72
Zm00001d034698 (GRMZM2G156848)
0.69 1.64 -0.36 0.3 0.28 -3.46 -2.43 -0.7 -1.18 -1.92 -1.81 -1.18 0.49 -1.06 -1.18 0.52 0.37 -0.26 -0.0 -4.87 0.82 -0.52 -3.43 0.06 0.4 -1.1 1.04 0.68 -0.18 -0.48 0.81 -0.64 0.43 0.1 1.73 -1.08 -0.82
Zm00001d036131 (GRMZM2G080542)
-0.35 1.42 0.21 0.98 0.41 -3.7 -2.71 0.37 -2.27 -2.39 -1.42 -0.98 1.21 -1.27 -0.33 0.45 1.52 -0.36 0.34 -7.01 0.9 0.38 -1.82 0.93 0.2 -0.38 0.55 0.29 -0.97 -0.17 -0.09 -2.3 -0.16 -0.24 0.41 -0.89 -1.48
Zm00001d038973 (GRMZM2G085675)
-0.46 1.43 -0.38 0.29 0.08 -3.92 -4.29 0.63 -2.4 -2.95 -1.75 -1.37 1.14 -0.33 -0.58 0.58 1.05 -0.18 0.66 -6.6 1.01 0.21 -1.84 1.08 0.25 -1.51 0.05 0.52 -0.88 0.89 0.71 -1.12 0.26 0.22 -0.16 -1.37 -1.19
Zm00001d039046 (GRMZM2G128477)
-0.78 1.49 0.06 1.11 0.42 -2.81 -0.63 0.56 -1.54 -1.39 -1.94 -0.87 0.62 -1.08 -0.81 0.66 1.41 -0.49 -0.23 -6.92 0.29 0.67 -1.51 0.96 -0.16 -0.93 0.33 0.1 - 1.35 0.68 -5.06 -0.56 -0.57 0.39 -0.76 -0.77
Zm00001d040276 (GRMZM2G122656)
-0.23 1.26 -0.41 0.24 -0.21 -5.75 -3.64 1.22 -5.1 -6.17 -3.27 -2.77 0.65 -0.61 -1.47 0.71 1.99 -0.3 0.92 -6.47 1.47 0.65 -3.36 1.43 0.3 -1.86 0.1 -0.16 -3.2 1.05 1.19 -2.94 -1.27 -0.44 -1.71 -2.1 -1.29
Zm00001d040588 (GRMZM2G058923)
0.34 1.18 -0.21 1.08 0.18 -2.15 -2.02 0.11 -0.39 -0.48 -1.8 -0.68 1.25 -0.49 -0.23 0.39 0.7 0.48 0.16 -4.25 1.17 -0.63 -2.22 0.47 0.72 -1.11 0.58 -0.05 -1.82 0.17 0.05 -1.6 -0.48 -1.19 0.81 -0.52 -0.93
Zm00001d043370 (GRMZM2G390160)
-0.66 1.33 0.03 -0.41 -0.2 -3.4 -2.32 0.46 -1.83 -2.03 -1.04 -1.05 0.13 -0.18 -0.69 0.4 0.78 -0.33 0.03 -5.6 0.41 -0.55 0.45 0.79 0.21 -0.3 0.59 0.48 0.29 0.55 1.11 -0.01 0.08 0.51 0.35 -1.08 -0.92
Zm00001d045500 (GRMZM2G048557)
0.21 1.9 -0.06 -0.04 0.39 -3.16 -3.08 0.15 -2.1 -2.54 -1.02 -0.9 1.21 -0.28 -0.3 0.67 1.04 -0.24 0.01 -3.57 0.9 0.48 -2.54 0.38 0.29 -0.79 1.01 0.03 -1.26 0.23 0.45 -1.15 -0.0 0.1 -0.61 -1.2 -1.22
Zm00001d045812 (GRMZM2G073123)
0.07 0.96 -0.51 0.89 -0.07 -2.91 -3.45 0.41 -1.81 -2.61 -1.89 -1.13 1.33 -0.17 -0.55 0.44 1.08 0.28 0.11 -3.28 0.67 0.62 -1.46 0.69 0.46 0.03 0.41 0.33 -2.11 0.86 0.16 -1.38 0.03 -0.19 0.5 -1.04 -1.43
Zm00001d045926 (GRMZM2G085932)
0.45 1.66 -0.24 1.32 0.06 -4.09 -3.21 0.08 -1.8 -2.2 -2.77 -1.5 1.27 -0.53 -0.36 0.05 0.82 -0.01 0.67 -3.95 0.25 -0.11 -1.75 1.16 -0.16 -0.52 0.38 0.32 -0.78 0.36 0.34 -1.55 0.13 0.13 0.4 -1.1 -1.79
Zm00001d046183 (GRMZM2G122290)
0.16 1.96 0.23 0.71 0.4 -4.68 -4.09 0.13 -2.67 -3.12 -1.82 -1.38 0.95 -0.62 -0.78 0.35 1.28 0.18 0.29 -5.17 0.65 0.19 -2.36 1.09 -0.15 -1.29 0.53 -0.07 -1.12 0.64 0.66 -1.21 -0.57 -0.64 0.5 -1.22 -0.91
Zm00001d046388 (GRMZM2G081474)
0.02 1.36 0.58 0.64 0.25 -3.24 -2.93 0.33 -1.5 -2.09 -1.63 -1.48 0.87 -0.83 -0.77 0.42 1.83 0.04 0.01 -3.52 1.29 0.25 -3.26 1.51 0.34 -2.2 0.61 -0.25 - -0.08 0.07 -4.8 -0.24 -0.84 0.48 -0.86 -0.71
Zm00001d047262 (GRMZM2G007103)
0.27 1.51 0.11 0.17 0.21 -2.31 -1.55 0.28 -0.96 -1.39 -0.97 -0.77 0.8 -0.56 -0.53 0.23 0.68 -0.09 -0.07 -3.82 0.25 0.96 -1.37 -0.21 0.73 0.59 0.69 0.1 0.29 -1.24 0.74 -1.34 0.03 -0.15 -0.07 -0.8 -0.83
Zm00001d047766 (GRMZM2G162467)
0.15 1.89 0.2 0.24 0.11 -3.59 -2.67 0.48 -1.56 -1.68 -2.18 -1.01 1.19 -1.57 -0.74 0.27 1.16 0.1 0.21 -6.29 0.26 0.9 -1.77 0.51 0.16 -0.71 0.66 0.22 -0.18 0.17 0.41 -1.09 0.07 0.26 -0.67 -0.78 -1.59
Zm00001d050234 (GRMZM2G044832)
-0.52 0.95 -0.22 0.69 -0.12 -2.94 -2.17 -0.06 -1.27 -1.46 -2.84 -0.61 1.44 0.09 -0.6 0.23 1.0 0.33 0.98 -6.21 0.66 0.57 -3.37 0.85 0.3 -0.99 0.6 0.01 -1.79 1.25 0.53 -1.77 -0.48 -0.78 0.36 -0.73 -1.21
Zm00001d051116 (GRMZM2G133838)
1.01 1.99 0.13 -0.35 0.2 -3.62 -3.04 0.37 -2.01 -2.4 -1.3 -1.23 1.1 0.07 -1.12 0.29 0.71 -0.37 -0.04 -6.44 0.85 -0.23 -3.69 0.01 0.36 -0.11 1.12 0.16 -0.09 0.53 0.6 -0.84 -0.29 0.05 -0.48 -1.45 -1.51
Zm00001d051498 (GRMZM2G081037)
-0.16 1.7 0.25 0.86 0.17 -3.9 -3.61 0.04 -2.52 -2.58 -1.85 -1.1 0.51 -1.18 -0.85 0.46 1.61 -0.08 0.46 -5.17 0.84 0.43 -1.85 0.98 1.1 -0.78 0.12 0.11 -1.11 0.52 0.52 -3.0 -0.07 0.0 -0.32 -0.95 -1.77
Zm00001d051741 (GRMZM2G122811)
-0.12 1.62 -0.22 0.28 0.11 -3.81 -3.31 0.18 -2.39 -2.69 -2.32 -1.62 0.91 -0.37 -0.56 0.54 1.17 -0.28 0.56 -8.29 1.19 1.58 -3.36 0.67 0.47 -0.46 0.42 -0.07 -1.79 0.57 0.99 -3.28 -0.66 -0.17 -0.1 -1.52 -1.51
Zm00001d052933 (GRMZM2G078198)
0.46 0.73 -0.18 0.57 0.04 -2.43 -3.3 0.34 -2.7 -3.17 -1.77 -1.04 1.38 0.01 -0.9 0.76 1.44 -0.55 -0.12 -8.35 1.28 0.41 -2.15 1.06 0.47 -0.83 0.31 0.05 -1.93 1.02 -0.14 -1.83 -0.48 -0.61 0.9 -1.29 -1.22
Zm00001d053175 (GRMZM2G122039)
1.12 1.57 1.11 -0.93 0.68 -2.36 -1.93 -0.68 -1.28 -1.64 -1.15 -0.71 0.51 -0.33 -1.21 0.73 -0.2 0.26 0.58 -1.74 0.28 -0.81 -2.39 -1.43 0.11 0.38 1.13 0.47 0.57 -0.72 -0.09 -1.34 -0.05 0.37 0.52 -0.47 -1.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.