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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
MA_10427998g0010 (YUC7) | 0.59 | -0.77 | - | - | - | - | - | -6.16 | 2.12 | 0.44 | - | - | - | - | - | - | - | - | 0.91 | -1.42 | -0.57 | -1.51 | -0.51 | -4.27 | -3.32 | -1.21 | - | -4.27 | -5.4 | - | 1.04 | -0.33 | -0.11 | 0.62 | 0.62 | 1.18 | 0.06 | 0.89 | 0.62 | 0.52 | 1.18 | -0.26 | 0.8 | 0.13 | -1.83 | 0.82 | 0.91 | 0.36 | -0.52 | 1.57 | 0.53 | 0.85 | 1.12 | 1.04 | 2.48 | -0.42 |
MA_10427998g0020 (YUC8) | -0.42 | 0.2 | - | - | - | - | - | - | 2.51 | -0.68 | - | - | - | - | - | - | - | - | -1.51 | - | -1.69 | -3.23 | -1.69 | -4.62 | -2.35 | -1.97 | - | -3.03 | -4.75 | -4.65 | 1.99 | 0.49 | 0.77 | 1.27 | 0.6 | 1.76 | 0.86 | 1.52 | 1.5 | 0.88 | 1.69 | -0.04 | 0.8 | 0.33 | -2.66 | 0.7 | -1.41 | 0.58 | 0.07 | 0.48 | -0.81 | -0.01 | 0.94 | 0.83 | 1.56 | -0.36 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.