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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -5.01 | - | - | -5.61 | -5.61 | -5.7 | - | -4.86 | -4.54 | -6.4 | -4.41 | - | -4.63 | -5.36 | - | -4.23 | - | - | -1.57 | -0.21 | -4.89 | -3.54 | - | -2.38 | -2.23 | -2.87 | 0.29 | -0.38 | -0.3 | -0.31 | 2.29 | 2.25 | 1.89 | 1.71 | 2.07 | 1.32 | 2.44 | 2.21 | 2.04 | 1.61 | 1.39 | 2.27 | - | - | -5.98 | -4.39 | -3.19 | -6.59 | -5.51 | -2.09 | -1.79 | -1.56 | -1.15 | -1.6 | -1.62 | -5.4 | |
| - | - | - | - | - | - | - | - | -4.86 | -4.36 | - | - | -3.54 | - | - | - | - | - | -1.98 | -1.89 | - | - | - | -2.87 | - | -3.4 | - | -1.28 | -1.0 | -2.91 | 2.17 | 2.58 | 2.22 | 1.31 | 2.5 | 1.4 | 2.24 | 2.59 | 1.71 | 1.7 | 1.45 | 2.88 | - | - | - | - | -2.66 | - | - | -2.51 | -2.67 | - | -2.33 | -4.07 | -3.74 | - | |
| - | - | - | - | -6.3 | -4.29 | - | - | - | - | - | -5.26 | -5.34 | -5.91 | -4.09 | - | -3.31 | -4.64 | - | -1.4 | - | - | - | -3.59 | -2.64 | -4.29 | -1.47 | -1.58 | -1.72 | -3.04 | 2.4 | 2.15 | 2.32 | 1.89 | 2.51 | 1.5 | 2.6 | 2.01 | 2.09 | 2.07 | 1.59 | 2.25 | - | - | -5.55 | - | -4.38 | - | -8.09 | -4.61 | -3.51 | -3.19 | -3.02 | -2.83 | -3.85 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.