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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.16 | - | 1.55 | -0.9 | 1.04 | 3.56 | - | -1.34 | -1.79 | 2.46 | 0.9 | 1.56 | 2.79 | 1.62 | 0.15 | 1.44 | - | - | 1.45 | -2.49 | 0.56 | - | - | - | 0.39 | -0.17 | - | - | - | - | -2.54 | - | - | -0.44 | - | - | - | - | - | - | - | - | -1.86 | -3.48 | 0.61 | - | -1.35 | - | -2.45 | -0.85 | -0.6 | -1.47 | - | -2.76 | -0.04 | -2.91 | |
| - | 0.07 | -0.64 | 1.5 | 2.2 | 2.74 | -0.74 | -1.73 | -1.23 | 2.71 | 0.25 | -1.52 | 1.42 | 2.15 | -0.31 | - | - | 2.1 | 1.81 | -0.38 | -0.72 | -1.74 | - | - | -0.89 | -0.31 | - | - | -0.97 | - | -0.55 | - | -1.76 | -1.42 | -0.63 | -0.95 | -0.69 | -1.99 | -0.04 | - | - | - | -1.15 | -1.34 | -0.3 | - | 1.35 | -1.94 | - | -1.4 | -1.89 | -0.69 | -0.76 | -0.92 | - | -1.61 | |
| - | - | 1.77 | 1.47 | 1.47 | 2.55 | - | -1.14 | -2.61 | 2.0 | 0.63 | 0.54 | 0.5 | - | 0.86 | - | - | 3.17 | 2.0 | - | - | -0.29 | - | - | - | 0.17 | -0.25 | - | -0.49 | -0.39 | -2.34 | - | - | - | -0.09 | - | - | 0.02 | -1.05 | -0.95 | -1.22 | 0.05 | - | - | - | - | 0.85 | -1.39 | -4.01 | 0.45 | 0.27 | -0.31 | 0.6 | -0.43 | -1.2 | -2.82 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.