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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.72 | -0.61 | -2.2 | 0.16 | -5.05 | -2.68 | 1.73 | -0.56 | -5.07 | -2.92 | - | - | -3.07 | -4.76 | -3.44 | 0.38 | - | - | -2.92 | 1.48 | -0.21 | -0.01 | -0.89 | -0.07 | 1.29 | -0.69 | 1.24 | 0.62 | 1.35 | 0.95 | 1.39 | 1.82 | 1.33 | 1.78 | 1.2 | 0.75 | 2.16 | 1.08 | 0.51 | 0.33 | 1.11 | 0.55 | -2.58 | -4.25 | -3.3 | -0.88 | - | -5.24 | -5.69 | - | - | - | - | - | - | -2.17 | |
| -2.36 | -1.81 | -0.3 | 0.84 | -1.19 | 0.1 | 1.33 | -1.45 | -1.47 | -2.44 | - | -3.7 | -3.92 | -2.85 | -4.3 | 0.94 | - | 0.8 | -2.69 | 0.42 | -1.16 | -1.52 | -1.37 | 0.45 | 0.22 | -1.61 | 0.86 | 0.79 | 0.81 | 0.94 | 1.17 | 1.56 | 0.85 | 1.44 | 1.18 | 0.7 | 1.76 | 1.44 | 0.95 | 0.97 | 0.86 | 0.93 | -0.21 | -1.12 | 0.07 | -1.34 | -3.4 | -1.61 | -1.53 | -4.29 | -6.23 | -5.1 | - | -6.26 | -4.43 | -2.39 | |
MA_8587835g0010 (ISPF) | -1.49 | -0.6 | - | -4.77 | -5.68 | -3.71 | - | -0.79 | -1.86 | -1.93 | - | -5.05 | -4.01 | -3.98 | -3.84 | - | - | - | -2.34 | 0.75 | 0.05 | -1.75 | -0.5 | -0.04 | 1.87 | -0.94 | 1.7 | 1.65 | 0.88 | 1.23 | 1.46 | 1.67 | 1.13 | 1.58 | 1.21 | 0.67 | 1.89 | 1.69 | 1.19 | 1.47 | 1.01 | 0.84 | -0.89 | -0.86 | -1.46 | -1.06 | -1.11 | -2.24 | -2.08 | - | -5.25 | - | - | - | -4.19 | -2.95 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.