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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.75 | 0.27 | -1.32 | -1.85 | -2.81 | - | - | 1.02 | 0.84 | -0.86 | - | -1.58 | -3.1 | -0.8 | -3.55 | 0.36 | - | - | -0.36 | 0.2 | -0.01 | 1.98 | -0.01 | -0.13 | 1.5 | 1.04 | 0.47 | -2.45 | 0.42 | -0.16 | - | - | - | - | - | - | - | - | - | - | - | - | -0.2 | 0.18 | -0.15 | 1.38 | 1.66 | 0.03 | 0.48 | 1.02 | 1.85 | 1.22 | 1.77 | 1.08 | 0.3 | 1.17 | |
| 0.33 | - | - | - | - | - | - | - | 0.56 | -1.55 | - | - | - | - | -0.24 | - | - | - | -3.04 | - | - | 3.18 | - | - | 0.84 | 1.99 | 1.42 | -0.69 | 1.18 | - | -1.5 | - | - | -1.27 | - | - | - | - | -0.84 | - | 0.14 | - | -1.18 | - | - | - | 3.32 | - | -1.03 | -0.2 | 2.76 | 1.85 | 1.26 | -0.67 | 1.94 | -3.07 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.