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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4.74 | -1.69 | - | - | - | - | - | - | 0.13 | -0.46 | - | - | - | - | - | - | - | - | -0.29 | - | -0.48 | -0.08 | 0.33 | -1.01 | -2.65 | -0.77 | - | - | -1.73 | -2.64 | -0.76 | -0.8 | -1.24 | -1.75 | -0.96 | -0.85 | -0.72 | -0.94 | -1.74 | -1.23 | -2.29 | -1.49 | -3.65 | -1.45 | -2.96 | 1.74 | 2.13 | -1.2 | -1.37 | 0.46 | -2.4 | -1.19 | 0.59 | 1.89 | -3.4 | - | |
MA_136166g0010 (TPS02) | 4.94 | -1.56 | - | - | -4.48 | -5.92 | - | - | 0.84 | 0.24 | -4.04 | -2.46 | -0.44 | 0.25 | -1.51 | -7.22 | - | - | -1.33 | -3.75 | -1.46 | -0.58 | -2.82 | -2.03 | -2.17 | 0.3 | -2.46 | -2.57 | -2.57 | -2.16 | -3.46 | -2.26 | -3.3 | -3.36 | -2.81 | -3.18 | -3.49 | -3.92 | -2.99 | -3.08 | -3.48 | -3.51 | -2.09 | -4.12 | -2.5 | -0.1 | 3.18 | -2.3 | -1.44 | 0.26 | -4.57 | -5.33 | 0.05 | -0.85 | -4.18 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.