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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.33 | - | - | - | -3.77 | -4.13 | - | -3.24 | -2.78 | 2.38 | - | 0.23 | 0.17 | -2.19 | -0.5 | - | - | 1.37 | 2.19 | - | - | - | - | -2.39 | - | -0.46 | -1.28 | -0.81 | - | - | 2.14 | 0.99 | 1.26 | 1.77 | 1.53 | 1.24 | 1.38 | 1.24 | 1.8 | 1.8 | 1.83 | 0.6 | -2.08 | -4.35 | -3.34 | - | - | -3.35 | -2.46 | -0.36 | -0.91 | -1.71 | -2.42 | -3.34 | -0.86 | -2.32 | |
MA_1154988g0010 (BIG) | -0.11 | -1.75 | - | - | - | - | - | - | -4.17 | 2.74 | - | -2.31 | 0.27 | -2.97 | - | - | - | - | 2.13 | -2.84 | -1.6 | -0.62 | - | - | - | -0.79 | - | - | -1.79 | - | 2.09 | 2.09 | 0.55 | 2.03 | 1.16 | 0.49 | 1.55 | 2.0 | 1.54 | 1.8 | 2.14 | 0.82 | - | - | -2.58 | - | - | - | - | -1.75 | -2.72 | -0.96 | 0.17 | -0.89 | -2.48 | - |
| -3.15 | - | -2.46 | -0.42 | -0.92 | -4.38 | 1.42 | -3.39 | -2.87 | 2.08 | 0.48 | -0.84 | 0.87 | 1.11 | -1.44 | -0.64 | - | - | 1.67 | -1.92 | - | -4.22 | - | -3.27 | -2.38 | -0.42 | -2.18 | -1.0 | - | - | 1.72 | 1.37 | 1.24 | 1.16 | 1.21 | 1.22 | 1.13 | 1.04 | 1.47 | 1.6 | 2.16 | 0.52 | -3.34 | -5.19 | -4.3 | -4.06 | -3.07 | -4.1 | -2.62 | -1.21 | -1.41 | -0.29 | -1.52 | -1.56 | -0.3 | -2.1 | |
| - | - | - | -0.69 | -1.61 | - | - | -2.95 | -2.49 | 1.69 | 0.72 | -2.77 | 0.79 | -1.84 | -0.36 | 0.06 | - | 1.37 | 0.97 | - | - | - | - | - | - | -1.04 | - | 0.26 | -2.2 | -1.1 | 1.91 | 1.51 | 1.38 | 1.77 | 1.21 | 1.68 | 0.88 | 1.14 | 1.69 | 1.31 | 1.72 | 0.98 | -1.89 | -1.86 | -1.01 | -2.02 | - | -2.89 | -2.25 | -0.78 | -0.69 | -0.61 | -0.17 | -0.75 | -0.91 | -1.69 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.